Database

Species Comparisons

Gene Groups

Novel Splicing-related Proteins

Specific Proteins

Physcomitrella patens (Pp)

1. Small nuclear Ribonucleoprotein (snRNP)

Group	CIWOG	Gene	hHomologs	SeHomologs	Gene Name	Chr	str	from	to	Txn	Domains	Transcripts
1.1	108	e_gw1.46.90.1	SmD2		ppSmD2-1	46	r	1683769	1684529		Sm 1
1.1	108	e_gw1.288.28.1	SmD2		ppSmD2-2	288	f	355675	356421		Sm 1
1.1	108	fgenesh1_pg.scaffold_181000018	SmD2		ppSmD2-3	181	f	254628	255542		Sm 1
1.1	147	e_gw1.726.1.1	SmD1	SmD1	ppSmD1-a1	726	f	6985	7964		Sm 1
1.1	147	estExt_gwp_gw1.C_370112	SmD1	SmD1	ppSmD1-a2	37	r	623913	625214		Sm 1
1.1	147	estExt_gwp_gw1.C_1160015	SmD1	SmD1	ppSmD1-a3	116	f	65571	66898		Sm 1
1.1	181	estExt_fgenesh1_pm.C_840022	SmE	SmE	ppSmE-a1	84	f	941266	941529		Sm 1
1.1	181	estExt_fgenesh1_kg.C_2090005	SmE	SmE	ppSmE-a2	209	r	655902	656165		Sm 1
1.1	181	e_gw1.26.139.1	SmE	SmE	ppSmE-a3	26	f	678454	678717		Sm 1
1.1	221	e_gw1.36.199.1	LSM4	LSm4	ppLSM4	36	f	2163182	2164552		Sm 1
1.1	336	estExt_fgenesh1_pg.C_320105	SmB	SmB1	ppSmB-a1	32	f	1402089	1402544		Sm 1
1.1	336	estExt_Genewise1.C_3330059	SmB	SmB1	ppSmB-a2	333	f	390385	390819		Sm 1
1.1	336	gw1.333.63.1	SmB	SmB1	ppSmB-a3	333	r	388029	388463		Sm 1
1.1	336	gw1.446.24.1	SmB	SmB1	ppSmB-a4	446	r	8006	8440		Sm 1
1.1	344	estExt_fgenesh1_pg.C_330029	SmD3	SmD3	ppSmD3-b	33	r	303656	305563		Sm 1
1.1	344	fgenesh1_pm.scaffold_33000008	SmD3	SmD3	ppSmD3-b	33	f	367634	369541		Sm 1
1.1	469	estExt_gwp_gw1.C_2180063	SmG	SmG	ppSmG-a-1	218	r	581027	581753		Sm 1
1.1	469	estExt_Genewise1.C_4750009	SmG	SmG	ppSmG-a-2	475	f	59261	59883		Sm 1
1.1	472	estExt_gwp_gw1.C_1900008	LSM7	LSm7	ppLSM7-1	190	f	254836	256294		Sm 1
1.1	472	estExt_Genewise1.C_350284	LSM7	LSm7	ppLSM7-2	35	f	1978745	1980293		Sm 1
1.1	479	estExt_gwp_gw1.C_3360028	LSM2	LSm2	ppLSM2	336	f	79088	79970		Sm 1
1.1	539	estExt_Genewise1.C_280109	LSM5	LSm5	ppLSM5/SAD1	28	f	887948	888833		Sm 1
1.1	540	e_gw1.219.49.1	SmF	SmF	ppSmF-1	219	r	207424	208250		Sm 1
1.1	540	estExt_Genewise1.C_460191	SmF	SmF	ppSmF-2	46	r	1696819	1697731		Sm 1
1.1	545	e_gw1.142.63.1	LSM1	LSm1	ppLSM1b-1	142	r	299541	301950		Sm 1
1.1	545	estExt_fgenesh1_pg.C_460132	LSM1	LSm1	ppLSM1b-2	46	f	1718425	1720753		Sm 1
1.1	548	estExt_fgenesh1_pg.C_170228	LSM6	LSm6	ppLSM6a-1	17	f	2581030	2582406		Sm 1
1.1	548	estExt_Genewise1.C_1620125	LSM6	LSm6	ppLSM6a-2	162	r	899918	900889		Sm 1
1.1	550	estExt_fgenesh1_pg.C_1540070	LSM8	LSm8	ppLSM8	154	f	850513	852049		Sm 1
1.1	561	estExt_gwp_gw1.C_160192	LSM3	LSm3	ppLSM3a	16	r	2439085	2440420		Sm 1
1.2	92	e_gw1.88.197.1	Luc7		ppLuc7a	88	f	201511	205155		DUF259 1
1.2	92	e_gw1.402.25.1	Luc7		ppLuc7b	402	f	249094	254156		DUF259 1
1.2	208	e_gw1.30.35.1	Prp39		ppPrp39a-1	30	r	1290890	1295673		HAT 7; TPR-like 1
1.2	208	e_gw1.164.9.1	Prp39		ppPrp39a-2	164	r	78638	83221		HAT 7; TPR-like 1
1.2	208	estExt_Genewise1.C_590198	Prp39		ppPrp39a-3	59	r	1253771	1259456		HAT 7; TPR-like 1
1.2	403	e_gw1.42.134.1	U1-70K	Snp1	ppU1-70K-1	42	f	2162695	2165062		RRM 1
1.2	403	e_gw1.332.23.1	U1-70K	Snp1	ppU1-70K-2	332	r	267376	269534		RRM 1
1.2	463	estExt_fgenesh1_pg.C_1550066	U1C_Subunit	Yhc1	ppU1C-1	155	f	925114	929005		C2H2 1; mrCtermi 3
1.2	463	fgenesh1_pg.scaffold_267000046	U1C_Subunit	Yhc1	ppU1C-2	267	r	563816	566347		C2H2 1; mrCtermi 3
1.2	475	estExt_fgenesh1_pg.C_1740055	FBP11	Prp40	ppPrp40a	174	f	642693	653028		WW 2; FF 5
1.2	538	e_gw1.22.82.1	Related_to_Luc7-like	Luc7	ppLuc7-rl	22	r	1345379	1349634		DUF259 1
1.3	170	e_gw1.156.105.1	SF3a120/SAP114_Subun	Prp21p	ppSAP114-1a-1	156	f	539564	542280		SWAP/Surp 2
1.3	170	estExt_gwp_gw1.C_30503	SF3a120/SAP114_Subun	Prp21p	ppSAP114-1a-2	3	f	4102132	4104960		SWAP/Surp 2
1.3	203	estExt_gwp_gw1.C_110154	SF3b160/SAP155_Subun	Hsh155	ppSAP155	11	r	2057859	2061737		HEAT 1; ARM 2; SAP
1.3	222	e_gw1.98.18.1	SF3b150/SAP145_Subun	Cus1p	ppSF3b150-1	98	r	55097	61806		PSP 1; DUF382 1
1.3	222	estExt_gwp_gw1.C_5050010	SF3b150/SAP145_Subun	Cus1p	ppSF3b150-2	505	r	64972	71580		PSP 1; DUF382 1
1.3	228	estExt_Genewise1.C_1030037	SF3b_14b/PHP5A	Rds3p	ppSF3b_14b/PHP5A-a	103	f	575936	576268		UPF0123 1
1.3	256	estExt_fgenesh1_pg.C_1880047	SF3b120/SAP130_Subun	Rse1p	ppSAP130a-1	188	r	595960	600641		CPSF_A 1; WD40-like
1.3	256	estExt_Genewise1.C_3910042	SF3b120/SAP130_Subun	Rse1p	ppSAP130a-2	391	f	203338	207755		CPSF_A 1; WD40-like
1.3	256	fgenesh1_pg.scaffold_197000028	SF3b120/SAP130_Subun	Rse1p	ppSAP130a-3	197	r	185777	190174		CPSF_A 1; WD40-like
1.3	347	e_gw1.87.54.1	U2B''_Subunit	Msl1p	ppU2B''	87	f	790009	792392		RRM 2
1.3	412	estExt_fgenesh1_pg.C_1520025	U2A'_Subunit	Lea1p	ppU2A-1	152	r	228919	232176		LRR 4
1.3	412	gw1.134.46.1	U2A'_Subunit	Lea1p	ppU2A-2	134	r	211037	213891		LRR 4
1.3	412	estExt_Genewise1.C_490074	U2A'_Subunit	Lea1p	ppU2A-3	49	f	863589	866698		LRR 4
1.3	460	estExt_Genewise1.C_630098	p14	Snu17p	ppP14-1	63	f	1480107	1480475		RRM 1
1.3	461	estExt_gwp_gw1.C_2180031	p14	Snu17p	ppSAP61	218	r	353439	357853		C2H2 1
1.3	466	estExt_gwp_gw1.C_2150124	SF3b_10		ppSF3b10a	215	f	839026	840286		SF3b10 1
1.3	470	estExt_gwp_gw1.C_700168	SF3b53/SAP49_Subunit	Hsh49p	ppSAP49a	70	r	1574737	1577928		RRM 2
1.3	758	gw1.29.96.1	SF3a66/SAP62_Subunit	Prp11p	ppSAP62-1	29	f	928076	930862		C2H2 1
1.3	758	fgenesh1_pg.scaffold_318000042	SF3a66/SAP62_Subunit	Prp11p	ppSAP62-2	318	f	427519	430488		C2H2 1
1.4	44	estExt_fgenesh1_pm.C_4310002	116kD_Subunit/elonga	Snu114p	ppU5-116-2a	431	f	60560	64010		EFG_C 1; GTP_EFTU
1.4	44	estExt_gwp_gw1.C_1380085	116kD_Subunit/elonga	Snu114p	ppU5-116-2b	138	f	367820	370409		EFG_C 1; GTP_EFTU
1.4	44	estExt_Genewise1.C_1380094	116kD_Subunit/elonga	Snu114p	ppU5-116-2c	138	r	414217	417476		EFG_C 1; GTP_EFTU
1.4	44	estExt_Genewise1.C_1380097	116kD_Subunit/elonga	Snu114p	ppU5-116-2d	3495	f	108	2674		EFG_C 1; GTP_EFTU
1.4	44	estExt_Genewise1.C_4310001	116kD_Subunit/elonga	Snu114p	ppU5-116-2e	431	r	43342	46996		EFG_C 1; GTP_EFTU
1.4	44	estExt_Genewise1.C_34950001	116kD_Subunit/elonga	Snu114p	ppU5-116-2f	138	r	340853	344652		EFG_C 1; GTP_EFTU
1.4	75	e_gw1.84.11.1	200kD_Subunit/Helica	Brr2p	ppU5-200-1	84	f	698434	716030		DEAD 1; Helicase_C
1.4	75	estExt_Genewise1.C_280123	200kD_Subunit/Helica	Brr2p	ppU5-200-2	28	f	957712	965188		DEAD 1; Helicase_C
1.4	182	estExt_gwp_gw1.C_4380024	220kD_Subunit	Prp8p	ppU5-220/Prp8a-1	438	r	126689	134523		Mov34 1
1.4	182	estExt_Genewise1.C_1010009	220kD_Subunit	Prp8p	ppU5-220/Prp8a-2	101	f	58682	66750		Mov34 1
1.4	259	e_gw1.11.51.1	100kD_Subunit	Prp28p	ppU5-100KD-1	11	r	1445195	1450617		DEAD 1; Helicase_C
1.4	259	estExt_Genewise1.C_760056	100kD_Subunit	Prp28p	ppU5-100KD-2	76	f	591177	597116		DEAD 1; Helicase_C
1.4	402	estExt_Genewise1.C_160130	102KD/Prp6-like	Prp6p	ppU5-102KD-1	16	f	2194179	2196995		Ubiquitin 1; TPR 3
1.4	402	estExt_Genewise1.C_2120013	102KD/Prp6-like	Prp6p	ppU5-102KD-2	212	r	51187	54027		Ubiquitin 1; TPR 3
1.4	405	estExt_gwp_gw1.C_680076	116kD_Subunit/elonga	Snu114p	ppU5-116-3	68	f	314528	318386		EFG_C 1; GTP_EFTU
1.4	413	estExt_fgenesh1_pm.C_1170010	116kD_Subunit/elonga	Snu114p	ppU5-116-1a-1	117	f	917911	923392		EFG_C 1; GTP_EFTU 1
1.4	413	estExt_fgenesh1_pm.C_2140004	116kD_Subunit/elonga	Snu114p	ppU5-116-1a-2	214	f	242136	247564		EFG_C 1; GTP_EFTU 1
1.4	637	estExt_Genewise1.C_1410065	15kD_Subunit	Dib1p	ppU5-15	141	r	732592	733344		DIMI 1; Thioredoxin
1.4	755	e_gw1.72.72.1	40kD_Subunit		ppU5-40-1	72	f	1289233	1291550		WD-40 7
1.4	755	estExt_gwp_gw1.C_1170033	40kD_Subunit		ppU5-40-2	117	f	546198	548940		WD-40 7
1.4	1099	e_gw1.41.16.1	200kD_Subunit/Helica	Brr2p	ppU5-200-3	41	r	2121072	2127790		DEAD 1; Sec63 1; Ru
1.5	223	estExt_gwp_gw1.C_280040	U4/U6-15.5K	Snu13p	ppTri15.5-1a-1	28	r	313617	314003		Ribosomal_L7Ae 1
1.5	223	estExt_gwp_gw1.C_650023	U4/U6-15.5K	Snu13p	ppTri15.5-1a-2	65	r	150885	151271		Ribosomal_L7Ae 1
1.5	223	estExt_Genewise1.C_340284	U4/U6-15.5K	Snu13p	ppTri15.5-1a-3	34	r	1728383	1728769		Ribosomal_L7Ae 1
1.5	223	estExt_Genewise1.C_650018	U4/U6-15.5K	Snu13p	ppTri15.5-1a-4	65	f	136621	137007		Ribosomal_L7Ae 1
1.5	260	fgenesh1_pm.scaffold_154000005	U4/U6-61KD	Prp31	ppU5-61/Prp31a	154	f	295513	298831		Nop 1
1.5	411	estExt_fgenesh1_pg.C_2690063	U4/U6-90K/SAP90	Prp3p	ppSAP90-1	269	f	583553	585615
1.5	756	e_gw1.29.46.1	U4/U6-60K/SAP60	Prp4p	ppSAP60	29	r	1575117	1577898		WD-40 7;SFM 1;WD40
1.6	399	estExt_fgenesh2_pg.C_990065	Tri-110KD	SAD1	ppTri110	99	f	1249896	1256253		SART-1 1
1.6	634	estExt_fgenesh1_pg.C_870028	(U4/U6.U5)	Tri-27kD/RY1	ppTri-27kD/RY1	87	r	386165	388147
1.6	638	gw1.7.83.1	Tri-65_KD	Snu66p	ppTri65a	7	r	230987	234731		UCH 1; ZnF_UBP 1
1.6	753	estExt_gwp_gw1.C_2010100	hSnu23/FLJ31121	Snu23p	ppSnu23	201	f	457076	457687		ZnF_U1 1
1.7	225	e_gw1.3.614.1	U11/U12-25K	(-99_protein)	ppU11/U12-25K-1	3	f	2895181	2896614		C2H2 1
1.7	225	e_gw1.278.27.1	U11/U12-25K	(-99_protein)	ppU11/U12-25K-2	278	f	297573	299014		C2H2 1
1.7	225	estExt_Genewise1.C_1090004	U11/U12-25K	(-99_protein)	ppU11/U12-25K-3	109	f	339126	340449		C2H2 1
1.7	346	e_gw1.116.32.1	U11/U12-65K		ppU11/U12-65K	116	r	422145	426259		RRM 2;PHOSPHOPANTET
1.7	982	fgenesh1_pg.scaffold_70000045	U11/U12-35K		ppU11/U12-35kD	70	r	604891	608378		RRM 1
1.7	1101	e_gw1.43.74.1	U11/U12-31K	(MADP1)	ppU11/U12-31K	43	r	1672187	1673946		RRM 1; CCHC 1

2. Splicing factors

Group	CIWOG	Gene	hHomologs	SeHomologs	Gene Name	Chr	str	from	to	Txn	Domains	Transcripts
2.1	49	estExt_gwp_gw1.C_2150084	U2AF35		ppU2AF35/AUS-1	215	r	564606	566014		RRM 1; CCHC 2;
2.1	49	gw1.15.161.1	U2AF35		ppU2AF35/AUS-2	15	r	105309	106599		RRM 1; CCHC 2;
2.1	55	e_gw1.58.41.1	U2AF65		ppU2AF65a/AULb	270	f	300774	307499		RRM 3;
2.1	55	e_gw1.79.119.1	U2AF65		ppU2AF65a/AULb	58	r	1593546	1599364		RRM 3;
2.1	55	e_gw1.98.112.1	U2AF65		ppU2AF65a/AULb	79	f	457158	462571		RRM 3;
2.1	55	estExt_gwp_gw1.C_2700027	U2AF65		ppU2AF65a/AULb	98	r	755039	761402		RRM 3;
2.1	55	gw1.88.127.1	U2AF65		ppU2AF65a/AULb	88	r	247836	253280		RRM 3;
2.1	72	e_gw1.81.40.1	PTB/hnRNP_I		ppPTB2a	81	r	1038130	1043282		RRM 2
2.1	72	gw1.326.8.1	PTB/hnRNP_I		ppPTB2b	326	r	6755	11733		RRM 2
2.1	169	e_gw1.48.34.1	PTB/hnRNP_I		ppPTB1-1	48	f	1130882	1135269		RRM 4
2.1	169	estExt_Genewise1.C_360029	PTB/hnRNP_I		ppPTB1-2	36	f	221418	225624		RRM 4
2.1	398	estExt_gwp_gw1.C_870043	SF1/BBP		ppSF1/BBP-1	87	r	795948	798464		RRM 1; CCHC 2; KH
2.1	398	estExt_gwp_gw1.C_1380136	SF1/BBP		ppSF1/BBP-2	138	f	917195	919699		RRM 1; CCHC 2; KH
2.1	409	e_gw1.126.58.1	U2AF65		ppAUL2	126	f	1210112	1212702		RRM 1
2.1	481	estExt_fgenesh1_pm.C_140014	CBP80	Cbc2p	ppCBP80-1	14	f	819495	822140		MIF4G 1; ARM 3
2.1	481	estExt_Genewise1.C_410020	CBP80	Cbc2p	ppCBP80-2	41	f	124451	127075		MIF4G 1; ARM 3
2.1	553	e_gw1.333.45.1	U2AF35_related_prote		ppUrp	333	r	161452	163391		RRM 1; CCCH 2
2.2	25	e_gw1.7.233.1	SF2/ASF		ppSRp30-1	7	r	37344	39382		RRM 2
2.2	25	e_gw1.173.63.1	SF2/ASF		ppSRp30-2	173	f	96833	99067		RRM 2
2.2	25	estExt_Genewise1.C_280136	SF2/ASF		ppSRp30-3	28	f	1041898	1044004		RRM 2
2.2	31	e_gw1.207.127.1	9G8		ppRSZp22-1	207	r	660710	662592		RRM 1; CCHC 1
2.2	31	e_gw1.332.33.1	9G8		ppRSZp22-2	332	r	113811	115934		RRM 1; CCHC 1
2.2	61	122960\|e_gw1.42.218.1	SC35		ppSC35-1						RRM 1;
2.2	61	172957\|estExt_fgenesh1_pg.C_3970019	SC35		ppSC35-2						RRM 1;
2.2	151	estExt_fgenesh1_pm.C_2700006	TASR-2	-	ppSCL30a-1	270	r	377098	379191		RRM 1
2.2	151	e_gw1.183.81.1	TASR-2		ppSCL30a-2	183	r	326969	330456		RRM 1
2.2	204	estExt_fgenesh1_pg.C_1440043	Plant_Novel_SR_prote		ppRSp40	144	f	725791	728662		RRM 2
2.3	255	estExt_gwp_gw1.C_1960080	SR140		ppSR140-1a	196	f	705282	712687		Surp 1;RRM 1;RPR 1
2.3	255	estExt_fgenesh2_pg.C_1370031	SR140		ppSR140-1b	137	r	433522	441080		Surp 1;RRM 1;RPR 1
2.3	549	e_gw1.51.85.1	SPF30		ppSPF30-1	51	f	1514814	1517436		Tudor 1
2.3	549	e_gw1.79.70.1	SPF30		ppSPF30-2	79	f	580145	582812		Tudor 1
2.3	549	estExt_fgenesh1_pg.C_590212	SPF30		ppSPF30-3	59	f	1891011	1893581		Tudor 1
2.3	647	estExt_fgenesh1_pg.C_2810007	SPF45		ppSPF45	281	f	26632	28259		DIII/G-patch domain
2.4	1	estExt_fgenesh1_pg.C_20112	HSP73/HSPA8		PpHSP73-1	2	r	1082753	1085179		Hsp70 1;
2.4	1	estExt_Genewise1.C_390053	HSP73/HSPA8		PpHSP73-2	39	r	465010	467220		Hsp70 1;
2.4	1	estExt_Genewise1.C_1810001	HSP73/HSPA8		PpHSP73-3	181	f	24602	26590		Hsp70 1;
2.4	1	estExt_Genewise1.C_3510021	HSP73/HSPA8		PpHSP73-4	351	f	142870	145202		Hsp70 1;
2.4	1	estExt_Genewise1.C_5260001	HSP73/HSPA8		PpHSP73-5	526	r	2066	4440		Hsp70 1;
2.4	1	fgenesh2_pg.scaffold_97000105	HSP73/HSPA8		PpHSP73-6	97	f	1326347	1328786		Hsp70 1;
2.4	1	fgenesh1_pm.scaffold_91000017	HSP73/HSPA8		PpHSP73-7	91	f	688564	690522		Hsp70 1;
2.4	1	fgenesh1_pg.scaffold_288000014	HSP73/HSPA8		PpHSP73-8	288	f	209151	211139		Hsp70 1;
2.4	1	fgenesh1_pg.scaffold_298000015	HSP73/HSPA8		PpHSP73-9	298	f	231753	233702		Hsp70 1;
2.4	134	estExt_fgenesh1_pm.C_1390014	G10	Cwc14p	ppG10-1	139	f	737986	739245		G10 1;
2.4	134	estExt_gwp_gw1.C_220243	G10	Cwc14p	ppG10-2	22	f	1855154	1856562		G10 1;
2.4	167	estExt_fgenesh1_pm.C_740015	hSyf3/CRN	Clf1/Syf3p	ppCRN1a-1	74	r	842597	846465		TPR 1; HAT 14; TPR
2.4	167	estExt_fgenesh1_pg.C_50158	hSyf3/CRN	Clf1/Syf3p	ppCRN1a-2	5	f	2950295	2954125		TPR 1; HAT 14; TPR
2.4	168	estExt_fgenesh1_pg.C_2490037	hSyf3/CRN	Clf1/Syf3p	ppCypE1a	249	f	345599	346114		Pro_isomerase 1
2.4	288	estExt_fgenesh2_pg.C_1390014	hSyf1	Syf1p	ppSyf1	139	r	296968	300504		TPR 1;HAT 10;TPRli
2.4	297	estExt_gwp_gw1.C_840209	hECM2	Ecm2p	ppECM2-1a	84	r	1489507	1491789		RRM 1; CCCH 1
2.4	407	estExt_fgenesh2_kg.C_780006	SPF27/BCAS2		ppSPF27	78	r	212826	214998		BCAS2 1
2.4	414	estExt_gwp_gw1.C_640096	hPrp19	Prp19p	ppPrp19a-1	64	f	1590975	1596813		WD-40 7; Ubox 1
2.4	414	estExt_Genewise1.C_140201	hPrp19	Prp19p	ppPrp19a-2	14	r	1519985	1525470		WD-40 7; Ubox 1
2.4	467	e_gw1.169.38.1	PRL1	Prp46p	ppPRL1-1	169	r	412481	415770		WD-40 2;WD40like 1
2.4	467	estExt_fgenesh1_pg.C_4020035	PRL1	Prp46p	ppPRL1-2	402	r	289490	294080		WD-40 2;WD40like 1
2.4	471	e_gw1.19.97.1	GCIP_p29	Syf2	ppGCIPp29	19	f	183162	185141
2.4	546	fgenesh1_pg.scaffold_169000061	AD-002	Cwc15p	ppAD-002	169	f	595530	597355		Cwf_Cwc_15 1
2.4	559	estExt_Genewise1.C_6410001	CDC5	Cef1	ppCDC5	641	f	3918	8205		SANT 2
2.4	640	fgenesh1_pg.scaffold_294000001	beta_catenin-like_1		ppCTNNNBL1	294	f	5153	8300		Armadillo 1; ARM 1
2.4	642	estExt_gwp_gw1.C_4750024	KIAA0560		ppAquarius	475	r	84819	88994
2.4	645	estExt_gwp_gw1.C_560076	SKIP	Prp45p	ppSKIP	56	f	851837	853651		SKIP/SNW 1
2.4	866	gw1.290.18.1	MGC23918		ppMGC23918	290	r	329021	329510
2.4	983	estExt_fgenesh1_pm.C_120049	PPIase-like_1		ppPPIase-like1	12	r	2863520	2865700		Pro_isomerase 1
2.4	1100	estExt_fgenesh1_pm.C_1580013	hIsy1	Isy1p	ppIsy1	158	r	580883	582187		Lsy1 1
2.5	122	e_gw1.213.69.1	hPrp4	kinase	ppPRP4K-1a	213	f	659148	662022		Pkinase 1;TyrKc 1;
2.5	122	146901\|e_gw1.250.5.1	hPrp4	kinase	ppPRP4K-1b						Pkinase 1;TyrKc 1;
2.5	220	estExt_gwp_gw1.C_1820056	TBL1-rp_1		ppTBL1-rp1	182	f	809468	814771		WD-40 5; Peptidease
2.5	464	fgenesh1_pg.scaffold_2000404	N-CoR1		ppN-CoR1-1	2	f	4721694	4732222		SANT 2;Homeodomain_
2.5	464	fgenesh1_pg.scaffold_61000017	N-CoR1		ppN-CoR1-2	61	r	145321	159194		SANT 2;Homeodomain_
2.5	474	e_gw1.269.82.1	FBP-21		ppFBP21	269	r	91025	93195		C2H2 1
2.5	543	e_gw1.91.14.1	Smc-1		ppSmc1	91	r	260241	267810		ATP_GTP_A_BS 1;SMC_
2.5	868	e_gw1.245.68.1	NPW38		ppNPW38	245	f	495251	499847		WW 2
2.6	65	e_gw1.4.224.1	ALY		ppALY-1a	390	r	264808	267174		RRM 1;
2.6	65	e_gw1.77.52.1	ALY		ppALY-1b	4	r	584076	586052		RRM 1;
2.6	65	estExt_fgenesh1_pg.C_3900014	ALY		ppALY-1c	77	r	856758	859065		RRM 1;
2.6	65	fgenesh1_pm.scaffold_57000010	ALY		ppALY-1d	57	r	1390892	1393092		RRM 1;
2.6	80	estExt_gwp_gw1.C_1230109	UAP56		ppUAP56-1	123	r	945417	949418		DEAD 1; Helicase_C
2.6	80	fgenesh1_pg.scaffold_311000013	UAP56		ppUAP56-2	311	r	165483	169303		DEAD 1; Helicase_C
2.6	342	estExt_gwp_gw1.C_550077	Srm160-like		ppSRM102-1	55	r	825998	827430		PWI 1
2.6	342	estExt_gwp_gw1.C_1810080	Srm160-like		ppSRM102-2	181	f	821166	823230		PWI 1
2.6	345	estExt_fgenesh1_pm.C_350034	RNPS1		ppSR45/ppRNPS1-1	35	f	1512369	1516130		RRM 1
2.6	345	estExt_fgenesh1_pg.C_1180104	RNPS1		ppSR45/ppRNPS1-2	118	f	839466	843208		RRM 1
2.6	345	fgenesh1_pg.scaffold_157000058	RNPS1		ppSR45/ppRNPS1-3	157	r	694381	698212		RRM 1
2.6	348	estExt_fgenesh1_kg.C_630004	Magoh		ppMagoh-1	63	r	932277	933474		Mago_nashi 1
2.6	348	estExt_gwp_gw1.C_1250022	Magoh		ooMagoh-2	125	f	301327	302498		Mago_nashi 1
2.6	417	estExt_fgenesh1_pm.C_5190002	Nuk-34/eIF4A3/DDX48		ppDDX48/eIF4A3-1a	519	r	88686	92001		DEAD 1; Helicase_C
2.6	417	fgenesh1_pm.scaffold_275000006	Nuk-34/eIF4A3/DDX48		ppDDX48/eIF4A3-1b	275	r	365287	368197		DEAD 1; Helicase_C
2.6	480	e_gw1.31.212.1	Y14		ppY14-1	31	r	1403612	1404960		RRM 1; RBMB 4
2.6	480	e_gw1.136.78.1	Y14		ppY14-2	136	f	705516	707029		RRM 1; RBMB 4
2.6	650	e_gw1.313.11.1	pinin		ppPinin-1	313	f	53586	57717		Pinin/SDK/memA 1
2.6	650	estExt_gwp_gw1.C_360097	pinin		ppPinin-2	36	f	1040085	1044398		Pinin/SDK/memA 1
2.7	415	estExt_gwp_gw1.C_3420016	Prp18	Prp18	ppPrp18-1	342	r	245577	247397		Prp18 1; SFM 1
2.7	416	fgenesh1_pg.scaffold_390000001	Prp18	Prp18	ppPrp17-1	390	f	93283	95016		WD-40 7;
2.7	551	estExt_gwp_gw1.C_200137	Slu7	Slu7p	ppSLU7-1a	20	r	1805349	1808953
2.7	747	e_gw1.39.102.1	Prp17	Prp17p	ppPrp17	39	f	398582	400662		WD-40 6
2.7	1102	estExt_gwp_gw1.C_1240010	Prp22	Prp22	ppPrp22-3	124	f	23997	25406		DEAD 1;Helicase_C
2.7	1103	e_gw1.89.8.1	Prp22	Prp22	ppPrp22-2	89	f	1105669	1109669		DEAD 1;Helicase_C
2.8	13	estExt_fgenesh1_pg.C_3310026	Prp2		ppPrp2-1a	331	f	358628	365754		DEAD 1; Helicase_C
2.8	13	estExt_gwp_gw1.C_180152	Prp2		ppPrp2-1a	18	f	2082679	2086845		DEAD 1; Helicase_C
2.8	13	estExt_gwp_gw1.C_430071	Prp2		ppPrp2-1a	43	f	420112	428868		DEAD 1; Helicase_C
2.8	13	estExt_Genewise1.C_180147	Prp2		ppPrp2-1a	18	f	2019778	2023944		DEAD 1; Helicase_C
2.8	13	estExt_Genewise1.C_4270010	Prp2		ptPrp2-1a	427	r	45465	49721		DEAD 1; Helicase_C
2.8	293	estExt_fgenesh1_pg.C_180039	SRm300		ppSRM300like-1	18	f	288582	296204		RRM 1; Filamin/ABP28
2.8	293	fgenesh1_pg.scaffold_8000015	SRm300		ppSRM300like-2	8	r	115341	120140		RRM 1; Filamin/ABP28
2.8	296	e_gw1.307.20.1	Prp5		ppPrp5-1a	307	r	316428	320683		DEAD 1; Helicase_C
2.8	478	e_gw1.234.40.1	hTra-2/SFRS10		ppTra/SFRS1-1	234	f	40746	42621		RRM 1
2.8	478	gw1.3.275.1	hTra-2/SFRS10		ppTra/SFRS1-2	3	r	1100441	1100797		RRM 1
2.8	478	gw1.27.117.1	hTra-2/SFRS10		ppTra/SFRS1-3	27	r	962774	963742		RRM 1
2.8	478	gw1.21.172.1	hTra-2/SFRS10		ppTra/SFRS1-4	21	r	1415637	1417797		RRM 1
2.8	754	e_gw1.257.4.1	Prp5		ppPrp5	257	f	385636	389501		DEAD 1;Helicase_C
2.8	979	e_gw1.101.51.1	hDbr1	dbr1	ppDbr1	101	f	725681	727583		Metallophos 1;DBRI

3. Splicing regulation

Group	CIWOG	Gene	hHomologs	SeHomologs	Gene Name	Chr	str	from	to	Txn	Domains	Transcripts
3.1	135	gw1.29.50.1	Kinase	SRPK2	ppSRPK2a-1	29	r	2409560	2411650		Pkinase 1; TyrKc 1
3.1	135	gw1.38.75.1	Kinase	SRPK2	ppSRPK2a-2	38	f	1563384	1564784		Pkinase 1; TyrKc 1
3.1	135	gw1.248.16.1	Kinase	SRPK2	ppSRPK2a-3	248	r	673494	675531		Pkinase 1; TyrKc 1
3.1	290	e_gw1.100.30.1	Kinase	Lammer/CLK_kinase	ppAFC3-1	100	r	591655	595053		Pkinase 1;TyrKc 1;S
3.1	290	e_gw1.132.89.1	Kinase	Lammer/CLK_kinase	ppAFC3-2	132	f	503753	507181		Pkinase 1;TyrKc 1;S
3.1	290	estExt_Genewise1.C_4250007	Kinase	Lammer/CLK_kinase	ppAFC3-3	425	f	76976	80304		Pkinase 1;TyrKc 1;S
3.2	45	estExt_fgenesh1_pg.C_1430007	Glycine-Rich_RBD		ppGRBP1d/GRBP1c/GRBP1e-1	143	r	54847	56176		RRM 1
3.2	45	estExt_Genewise1.C_450174	Glycine-Rich_RBD		ppGRBP1d/GRBP1c/GRBP1e-2	45	f	2248437	2249710		RRM 1
3.2	45	gw1.118.111.1	Glycine-Rich_RBD		ppGRBP1d/GRBP1c/GRBP1e-3	118	f	541819	543040		RRM 1
3.2	45	gw1.118.113.1	Glycine-Rich_RBD		ppGRBP1d/GRBP1c/GRBP1e-4	118	r	540077	541062		RRM 1
3.2	109	gw1.123.70.1	Glycine-Rich_RBD		ppGRP7/ppGRBP3a-1	123	r	506271	506588		RRM 1
3.2	109	gw1.136.87.1	Glycine-Rich_RBD		ppGRP7/ppGRBP3a-2	136	f	456800	457060		RRM 1
3.2	109	fgenesh1_pg.scaffold_42000167	Glycine-Rich_RBD		ppGRP7/ppGRBP3a-3	42	f	2080023	2080511		RRM 1
3.3	29	e_gw1.6.161.1	hnRNP_A/B		PpRNPA/B-1	6	f	1470452	1471863		RRM 2
3.3	29	e_gw1.13.176.1	hnRNP_A/B		PpRNPA/B-2	13	r	1114271	1115615		RRM 2
3.3	29	e_gw1.13.177.1	hnRNP_A/B		PpRNPA/B-3	13	r	1185977	1187321		RRM 2
3.3	29	e_gw1.159.40.1	hnRNP_A/B		PpRNPA/B-4	159	f	199838	201341		RRM 2
3.3	257	gw1.70.172.1	hnRNP_A/B		ppUBA2c-1	70	r	1403463	1404360		RRM 2
3.3	257	gw1.188.84.1	hnRNP_A/B		ppUBA2c-2	188	f	379310	379810		RRM 2
3.4	93	e_gw1.118.143.1	hnRNP_R/Q		hnRNP-R3/ppPA/B-1	118	r	304566	305955		RRM 3
3.4	93	e_gw1.164.69.1	hnRNP_R/Q		hnRNP-R3/ppPA/B-2	164	f	722020	723572		RRM 3
3.4	93	e_gw1.327.24.1	hnRNP_R/Q		hnRNP-R3/ppPA/B-3	327	f	176051	177733		RRM 3
3.4	179	estExt_Genewise1.C_1480019	hnRNP_R/Q		pp-hnRNP-R1	148	f	261645	264518		RRM 3
3.4	183	estExt_fgenesh1_pm.C_1750001	CUG-BP		ppCUG-BP1-1	175	f	54224	58619		RRM 3; HUDSXLRNA 4
3.4	183	e_gw1.12.73.1	CUG-BP		ppCUG-BP1-1	12	f	1396900	1400857		RRM 3; HUDSXLRNA 4
3.4	337	e_gw1.158.95.1	_		ppFCA1-1	158	r	774869	778691		RRM 2; WW 1
3.4	337	gw1.47.198.1	_		ppFCA1-2	47	r	1533656	1536982		RRM 2; WW 1
3.4	350	e_gw1.26.120.1	hnRNP_G		pp-hnRNP-G2-1	26	f	2001055	2001738		RRM 1; CCHC 1
3.4	350	e_gw1.128.62.1	hnRNP_G		pp-hnRNP-G2-2	128	f	464595	465269		RRM 1; CCHC 1
3.4	555	estExt_fgenesh2_pg.C_1480033	hnRNP_P2		pp-hnRNP-P	148	r	382821	386203		RRM 1; ZnF_RBZ 2
3.4	639	gw1.150.78.1	hnRNP_E1/E2		pp-hnRNP-E-1	150	f	699212	701999		KH 3
3.4	639	gw1.51.212.1	hnRNP_E1/E2		pp-hnRNP-E-2	51	f	922906	925235		KH 3
3.4	746	e_gw1.462.8.1	hnRNP_F/hnRNP_H		pp-hnRNP-F/AtRNPH/F_	462	r	26355	27074		RRM 2
3.5	107	estExt_fgenesh1_kg.C_4560001	hnRNP-like_5		ppAth1	456	r	162674	164791		HANP4_PAI-RBP! 1
3.5	107	estExt_fgenesh1_pg.C_450162	hnRNP-like_5		ppAth2	45	r	2134602	2137105		HANP4_PAI-RBP! 1
3.5	107	estExt_fgenesh2_pg.C_970090	hnRNP-like_5		ppAth3	97	f	1191621	1193767		HANP4_PAI-RBP! 1
3.5	107	fgenesh1_pm.scaffold_22000005	hnRNP-like_5		ppAth4	22	f	116531	118998		HANP4_PAI-RBP! 1
3.5	636	estExt_Genewise1.C_3910068	hnRNP-like_3		ppRBP45d-1	391	f	323784	328551		RRM 3
3.5	636	gw1.219.6.1	hnRNP-like_3		ppRBP45d-2	219	f	754638	759678		RRM 3
3.5	636	gw1.339.2.1	hnRNP-like_3		ppRBP45d-3	339	r	44492	49529		RRM 3

4. Novel spliceosome proteins

Group	CIWOG	Gene	hHomologs	SeHomologs	Gene Name	Chr	str	from	to	Txn	Domains	Transcripts
4.1	148	estExt_fgenesh1_pm.C_650013	eIF3	sub2	pp-eIF3sub2a-1	65	f	773628	776114		WD40 4
4.1	148	estExt_fgenesh1_pg.C_340208	eIF3	sub2	pp-eIF3sub2a-2	34	r	2016544	2019265		WD40 4
4.1	148	estExt_gwp_gw1.C_280017	eIF3	sub2	pp-eIF3sub2a-3	28	r	134507	137266		WD40 4
4.1	206	e_gw1.80.9.1	hTHO2		ppTHO2	80	f	550645	564780		Tho2
4.1	254	estExt_gwp_gw1.C_970072	KIAA0983		ppKIAA0983-1	97	f	748389	750729		Fimp 1
4.1	291	estExt_fgenesh1_pm.C_90013	eIF3_sub6		pp-eIF3sub6-1	9	f	896185	899978
4.1	291	estExt_fgenesh1_pm.C_730006	eIF3_sub6		pp-eIF3sub6-2	73	r	93872	96687
4.1	291	estExt_gwp_gw1.C_3630017	eIF3_sub6		pp-eIF3sub6-3	363	f	121106	124168
4.1	335	estExt_Genewise1.C_930098	C21orf66		ppC21orf66	93	r	1240947	1244951
4.1	400	estExt_gwp_gw1.C_70184	hHPR1		ppHPR1	7	r	1392833	1394533
4.1	483	estExt_gwp_gw1.C_180167	HsKin17	Rts2p	ppKin17-1	18	f	2399490	2401099
4.1	541	e_gw1.35.320.1	CF_I-25kD		ppCFI-25kD-1	35	r	1386567	1388704
4.1	976	fgenesh1_pm.scaffold_61000005	CPSF_160K		ppCPSF-160k	61	f	163091	173918
4.2	32	estExt_fgenesh1_pm.C_2810008	PAB1/PAB2		ppPABP1/ppPAB1-1	257	f	432088	435809		RRM 4
4.2	32	e_gw1.51.213.1	PAB1/PAB2		ppPABP1/ppPAB1-2	281	f	215557	219043		RRM 4
4.2	32	estExt_fgenesh1_pg.C_2570045	PAB1/PAB2		ppPABP1/ppPAB1-3	126	r	867910	871406		RRM 4
4.2	32	estExt_Genewise1.C_1260120	PAB1/PAB2		ppPABP1/ppPAB1-4	51	f	798945	801163		RRM 4
4.3	69	estExt_fgenesh1_pm.C_1380026	p72		p72-4/p72-3/p72-5	138	r	845052	848948		DEAD 1; Helicase_C
4.3	69	estExt_gwp_gw1.C_420049	p72		p72-4/p72-3/p72-5	42	r	725119	729001		DEAD 1; Helicase_C
4.3	100	estExt_gwp_gw1.C_590062	p72		p72-1	59	f	333236	339104		DEAD 1; Helicase 1
4.3	136	estExt_gwp_gw1.C_580012	KIAA0052		ppKIAA0052a-1	58	r	162370	170050		DEAD 1; DSHCT 1; H
4.3	136	estExt_gwp_gw1.C_690013	KIAA0052		ppKIAA0052a-2	69	f	124320	131904		DEAD 1; DSHCT 1; H
4.3	339	e_gw1.135.21.1	hDbp5	Dbp5p	ppDbp5-1	135	f	278904	281993
4.3	339	e_gw1.492.1.1	hDbp5	Dbp5p	ppDbp5-2	492	f	99770	103001
4.3	462	estExt_Genewise1.C_2150004	Abstrakt	(Ded1p)	ppAbstrakt-a	215	f	13858	15708
4.3	654	estExt_fgenesh1_pm.C_2680003	DDX35		ppDDX35	268	f	32241	34295
4.4	404	fgenesh1_pg.scaffold_131000018	KIAA0073		ppKIA0073	131	r	128055	132685
4.4	652	estExt_Genewise1.C_1500031	PPIase-like_3		ppPPIL3	150	r	331819	333422
4.4	745	estExt_fgenesh1_pm.C_330010	Cyp-60		ppCYP-60	33	f	420757	423405
4.4	751	e_gw1.170.62.1	SDCCAG10		ppSDCCAG10	170	r	648152	651525
4.5	54	gw1.11.54.1	CDCL2_p110		ppCDCL2p110-1	11	f	340348	341679		Pkinase_Tyr 1; Pkin
4.5	70	estExt_fgenesh1_pg.C_2070055	RNPC2		ppNPC2a/ppNPC2b	207	r	681387	685260		RRM 2
4.5	70	estExt_gwp_gw1.C_3320014	RNPC2		ppNPC2a/ppNPC2b	332	f	121216	124132		RRM 2
4.5	99	gw1.36.181.1	IMP3		ppIMP3/KOC	36	r	561485	563794		KH 4
4.5	180	estExt_fgenesh1_pg.C_320174	RBM5		ppRBM5-1	32	r	2191695	2198982		G-patch 1; RRM 2;
4.5	180	fgenesh1_pm.scaffold_40000018	RBM5		ppRBM5-2	40	f	466837	472406		G-patch 1; RRM 2;
4.5	184	e_gw1.430.3.1	PMSCL2		ppPMSCL2-1	430	r	188391	192329		3_5_exonuc 1; HRDC
4.5	207	e_gw1.58.172.1	DKFZP586O0120		ppDKFZP586O0120-1	58	f	499477	499830		DUF1754 1
4.5	207	jgi\|Phypa1_1\|39455\|gw1.59.213.1	DKFZP586O0120		ppDKFZP586O0120-2						DUF1754 1
4.5	261	estExt_fgenesh1_pg.C_150112	RACK1	Asc1p	ppRACK1a-1	15	r	1302768	1303718		WD40 5
4.5	261	estExt_Genewise1.C_2590023	RACK1	Asc1p	ppRACK1a-2	259	f	424857	425807		WD40 5
4.5	261	estExt_Genewise1.C_2760003	RACK1	Asc1p	ppRACK1a-3	276	f	12595	13545		WD40 5
4.5	289	estExt_fgenesh1_pg.C_2710053	AcinusL		ppAcinusL-1	271	r	480875	484183		SAP 1
4.5	289	estExt_fgenesh2_pg.C_890063	AcinusL		ppAcinusL-2	89	f	869687	873173		SAP 1
4.5	294	estExt_gwp_gw1.C_1360127	hSmu-1/FLJ10805		ppSmu-1a	136	f	914214	919627
4.5	294	estExt_Genewise1.C_310051	hSmu-1/FLJ10805		ppSmu-1b	31	f	370847	376153
4.5	334	fgenesh1_pg.scaffold_4000037	TIP-49	Rvb1p	ppTIP49	4	r	600396	604200
4.5	340	estExt_Genewise1.C_3760042	UBL5p	Hub1p	ppUBL5a	376	f	285312	285533
4.5	343	estExt_fgenesh1_pg.C_730012	KIAA1604		ppKIAA1604	73	r	59211	61322
4.5	406	estExt_Genewise1.C_390200	CA150		ppCA150-1	39	f	1662813	1669758
4.5	406	fgenesh1_pg.scaffold_2000159	CA150		ppCA150-2	2	f	1558304	1565992
4.5	408	estExt_fgenesh1_pg.C_2290024	DGSI_protein		ppDGCR14	229	r	346646	348829
4.5	465	e_gw1.2.614.1	SF4/F23858		ppSF4	2	f	907869	910543
4.5	473	estExt_fgenesh1_pm.C_2200004	NOSIP		ppNOSIP-1	220	r	386595	388103
4.5	473	estExt_gwp_gw1.C_2580008	NOSIP		ppNOSIP-2	258	f	100076	101280
4.5	476	e_gw1.162.15.1	TFIP11/TIP39		ppTFIP11/TIP39a-1	162	r	519978	522539
4.5	476	estExt_gwp_gw1.C_2920010	TFIP11/TIP39		ppTFIP11/TIP39a-2	292	r	77280	79862
4.5	484	estExt_fgenesh1_pg.C_2550039	TIP-48		ppRuvB/TIP48a-1	255	r	558789	560924
4.5	484	fgenesh1_pm.scaffold_402000007	TIP-48		ppRuvB/TIP48a-2	402	r	169250	171181
4.5	552	fgenesh1_pm.scaffold_299000002	Ku70		ppKu70	299	f	10843	16519
4.5	554	estExt_gwp_gw1.C_1140075	ZNF183		ppZNF183a	114	r	473523	475000
4.5	556	estExt_fgenesh1_pg.C_140117	MFAP1		ppMFAP1a	14	r	1227063	1228883
4.5	633	fgenesh1_pm.scaffold_427000004	MGC4238		ppMORG1	427	r	73428	76066
4.5	643	gw1.17.31.1	PMSCL2		ppPMSCL2-3	17	r	2203328	2208154
4.5	644	estExt_gwp_gw1.C_3000034	PMSCL2		ppRED	300	r	336183	340430
4.5	646	estExt_fgenesh1_pg.C_620092	FLJ90157/DKFZp434E22		ppPSP1	62	r	1311981	1315204
4.5	649	e_gw1.294.23.1	FLJ10374		ppCWF16-1	294	r	527858	529975
4.5	651	estExt_gwp_gw1.C_2800025	Cactin		ppCactin	280	f	251350	253236
4.5	749	gw1.8.103.1	FLJ10634		ppCAJ1/FLJ10634	8	r	2695315	2697010
4.5	750	estExt_fgenesh1_pg.C_3090029	FLJ10206		ppFLJ10206	309	f	298414	306614
4.5	871	fgenesh1_pm.scaffold_74000006	MGC13125	Cwc26p	ppMGC13125	74	f	313690	315387
4.5	977	estExt_fgenesh1_pg.C_3600017	SPF31		ppSPF31/Jiv	360	f	292674	293408

5. Possible splicing related proteins

Group	CIWOG	Gene	hHomologs	SeHomologs	Gene Name	Chr	str	from	to	Txn	Domains	Transcripts
5.1	205	fgenesh1_pg.scaffold_1052000001	Splicing_factor_like		ppSFL3-1	1052	f	14599	15481		KH_1 2
5.1	205	estExt_fgenesh1_pg.C_800041	Splicing_factor_like		ppSFL3-2	80	r	333788	338507		KH_1 2
5.1	205	fgenesh1_pg.scaffold_87000102	Splicing_factor_like		ppSFL3-3	87	r	1176885	1181389		KH_1 2
5.1	224	e_gw1.41.217.1	Splicing_factor_like		ppSFL6a-1	41	r	489446	492910		Pro_isomerase 1
5.1	224	e_gw1.279.48.1	Splicing_factor_like		ppSFL6a-2	279	r	150335	153520		Pro_isomerase 1
5.1	547	estExt_gwp_gw1.C_1010073	Splicing_factor_like		ppSFL5	101	f	715729	723488
5.1	641	e_gw1.28.128.1	Splicing_factor_like		ppSFL4	28	f	1298166	1301876
5.2	121	estExt_fgenesh1_pm.C_220029	DNA_binding_protein_		ppDBP1a-1	22	r	1429859	1432633		NOP5NT 1; NOSIC 1;
5.2	121	estExt_fgenesh1_pg.C_110141	DNA_binding_protein_		ppDBP1a-2	11	f	1957649	1960330		NOP5NT 1; NOSIC 1;
5.2	333	estExt_fgenesh1_pg.C_4620015	RNA_binding_2		ppRBD2b-1	462	r	139658	141801
5.2	333	fgenesh2_pg.scaffold_148000004	RNA_binding_2		ppRBD2b-2	148	r	43432	44442
5.2	338	fgenesh1_pg.scaffold_458000001	DNA_binding_protein_		ppDBP2a-1	458	f	28362	36918
5.2	338	estExt_Genewise1.C_2030018	DNA_binding_protein_		ppDBP2a-2	203	f	490994	499247
5.3	258	e_gw1.50.8.1	SPT5		ppSPT5a-1	50	f	1782082	1789596		KOW 1; Supt5 2
5.3	258	e_gw1.144.2.1	SPT5		ppSPT5a-2	144	r	165349	173788		KOW 1; Supt5 2
5.3	295	e_gw1.100.7.1	Elongation_Factor(M)		ppEFMa-1	100	r	200942	208040
5.3	295	estExt_Genewise1.C_200056	Elongation_Factor(M)		ppEFMa-2	20	r	583685	590843
5.3	759	fgenesh1_pm.scaffold_352000002	Elongation_Factor		ppEF1	352	r	20387	23681

Database

10 Plant Species

Species Comparisons

Gene Groups

Novel Splicing-related Proteins

Specific Proteins

Physcomitrella patens (Pp)

1. Small nuclear Ribonucleoprotein (snRNP)

Group

CIWOG

Gene

hHomologs

SeHomologs

Gene Name

Chr

str

from

to

Txn

Domains

Transcripts

2. Splicing factors

Group

CIWOG

Gene

hHomologs

SeHomologs

Gene Name

Chr

str

from

to

Txn

Domains

Transcripts

3. Splicing regulation

Group

CIWOG

Gene

hHomologs

SeHomologs

Gene Name

Chr

str

from

to

Txn

Domains

Transcripts

4. Novel spliceosome proteins

Group

CIWOG

Gene

hHomologs

SeHomologs

Gene Name

Chr

str

from

to

Txn

Domains

Transcripts

5. Possible splicing related proteins

Group

CIWOG

Gene

hHomologs

SeHomologs

Gene Name

Chr

str

from

to

Txn

Domains

Transcripts

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