Oryza sativa (Os)
1. Small nuclear Ribonucleoprotein (snRNP)
Group |
CIWOG |
Gene |
hHomologs |
SeHomologs |
Gene Name |
Chr |
str |
from |
to |
Txn |
Domains |
Transcripts |
|
1.1 | 108 | LOC_Os05g24970.1 | SmD2 | osSmD2-1 | 5 | r | 14392046 | 14394726 | Sm 1 | ||||
1.1 | 108 | LOC_Os05g24970.2 | SmD2 | osSmD2-2 | 5 | r | 14392046 | 14394854 | Sm 1 | ||||
1.1 | 147 | LOC_Os02g37430.1 | SmD1 | SmD1 | osSmD1-a1 | 2 | r | 22596458 | 22599889 | Sm 1 | |||
1.1 | 147 | LOC_Os04g39444.1 | SmD1 | SmD1 | osSmD1-a2 | 4 | r | 23312012 | 23314226 | Sm 1 | |||
1.1 | 181 | LOC_Os02g03440.1 | SmE | SmE | osSmE-a | 2 | r | 1399279 | 1401336 | Sm 1 | |||
1.1 | 221 | LOC_Os01g15310.1 | LSM4 | LSm4 | osLSM4 | 1 | r | 8569841 | 8573555 | Sm 1 | |||
1.1 | 336 | LOC_Os07g07220.1 | SmB | SmB1 | osSmB-a | 7 | f | 3573405 | 3575954 | Sm 1 | |||
1.1 | 344 | LOC_Os02g01250.1 | SmD3 | SmD3 | osSmD3-b1 | 2 | r | 135301 | 138097 | Sm 1 | |||
1.1 | 344 | LOC_Os03g13760.1 | SmD3 | SmD3 | osSmD3-b2 | 3 | f | 7448720 | 7451976 | Sm 1 | |||
1.1 | 469 | LOC_Os03g29740.1 | SmG | SmG | osSmG-a | 3 | f | 16940020 | 16942201 | Sm 1 | |||
1.1 | 472 | LOC_Os08g08040.1 | LSM7 | LSm7 | osLSM7 | 8 | f | 4561431 | 4564408 | Sm 1 | |||
1.1 | 479 | LOC_Os08g05850.1 | LSM2 | LSm2 | osLSM2 | 8 | f | 3145491 | 3149141 | Sm 1 | |||
1.1 | 539 | LOC_Os05g32310.1 | LSM5 | LSm5 | osLSM5/SAD1 | 5 | r | 18775817 | 18778305 | Sm 1 | |||
1.1 | 540 | LOC_Os11g43620.1 | SmF | SmF | osSmF | 11 | f | 25841490 | 25843568 | Sm 1 | |||
1.1 | 545 | LOC_Os04g36810.1 | LSM1 | LSm1 | osLSM1b | 4 | f | 22038604 | 22042099 | Sm 1 | |||
1.1 | 548 | LOC_Os02g30624.1 | LSM6 | LSm6 | osLSM6a-1 | 2 | r | 18225619 | 18229931 | Sm 1 | |||
1.1 | 548 | LOC_Os02g30624.2 | LSM6 | LSm6 | osLSM6a-1 | 2 | r | 18225256 | 18229931 | Sm 1 | |||
1.1 | 548 | LOC_Os04g31950.1 | LSM6 | LSm6 | osLSM6a-2 | 4 | r | 18962287 | 18967624 | Sm 1 | |||
1.1 | 550 | LOC_Os05g51650.1 | LSM8 | LSm8 | osLSM8 | 5 | f | 29560547 | 29562155 | Sm 1 | |||
1.1 | 561 | LOC_Os01g64690.1 | LSM3 | LSm3 | osLSM3a | 1 | r | 37526356 | 37528059 | Sm 1 | |||
1.2 | 92 | LOC_Os02g39300.1 | Luc7 | osLuc7a | 2 | f | 23723380 | 23728528 | DUF259 1 | ||||
1.2 | 92 | LOC_Os03g62640.2 | Luc7 | osLuc7b | 3 | r | 35439310 | 35445340 | DUF259 1 | ||||
1.2 | 92 | LOC_Os03g62640.3 | Luc7 | osLuc7b | 3 | r | 35439307 | 3544534 | DUF259 1 | ||||
1.2 | 92 | LOC_Os03g62640.4 | Luc7 | osLuc7b | 3 | r | 35439307 | 3544534 | DUF259 1 | ||||
1.2 | 208 | LOC_Os03g11200.1 | Prp39 | osPrp39a | 3 | r | 5759804 | 5766440 | HAT 7; TPR-like 1 | ||||
1.2 | 403 | LOC_Os10g02630.1 | U1-70K | Snp1 | osU1-70K | 10 | r | 1006562 | 1011920 | RRM 1 | |||
1.2 | 463 | LOC_Os02g16640.1 | U1C_Subunit | Yhc1 | osU1C | 2 | r | 9505790 | 9509900 | C2H2 1; mrCtermi 3 | |||
1.2 | 475 | LOC_Os01g34780.1 | FBP11 | Prp40 | osPrp40a | 1 | r | 19176691 | 19184701 | WW 2; FF 5 | |||
1.2 | 475 | LOC_Os01g34780.2 | FBP11 | Prp40 | osPrp40a | 1 | r | 19176692 | 19184701 | WW 2; FF 5 | |||
1.2 | 538 | LOC_Os07g27300.1 | Related_to_Luc7-like | Luc7 | osLuc7-rl | 7 | r | 15867936 | 15873107 | DUF259 1 | |||
1.2 | 538 | LOC_Os07g27300.2 | Related_to_Luc7-like | Luc7 | osLuc7-rl | 7 | r | 15868787 | 15873107 | DUF259 1 | |||
1.2 | 1097 | LOC_Os08g29124.1 | Prp39 | osPrp39b | 8 | r | 17819654 | 17835422 | HAT 4 | ||||
1.3 | 170 | LOC_Os02g14780.1 | SF3a120/SAP114_Subun | Prp21p | osSAP114-1a | 2 | f | 8196894 | 8199811 | SWAP/Surp 2 | |||
1.3 | 170 | LOC_Os02g14780.2 | SF3a120/SAP114_Subun | Prp21p | osSAP114-1a | 2 | f | 8196894 | 8200387 | SWAP/Surp 2 | |||
1.3 | 203 | LOC_Os02g04950.1 | SF3b160/SAP155_Subun | Hsh155 | osSAP155-1 | 2 | r | 2318089 | 2323335 | HEAT 1; ARM 2; SAP | |||
1.3 | 203 | LOC_Os02g05310.1 | SF3b160/SAP155_Subun | Hsh155 | osSAP155-2 | 2 | f | 2545982 | 2551064 | HEAT 1; ARM 2; SAP | |||
1.3 | 203 | LOC_Os02g05310.2 | SF3b160/SAP155_Subun | Hsh155 | osSAP155-2 | 2 | f | 2545982 | 2551064 | HEAT 1; ARM 2; SAP | |||
1.3 | 203 | LOC_Os02g05310.3 | SF3b160/SAP155_Subun | Hsh155 | osSAP155-2 | 2 | f | 2545982 | 2551238 | HEAT 1; ARM 2; SAP | |||
1.3 | 203 | LOC_Os02g05310.4 | SF3b160/SAP155_Subun | Hsh155 | osSAP155-2 | 2 | f | 2545982 | 2551064 | HEAT 1; ARM 2; SAP | |||
1.3 | 203 | LOC_Os02g05410.1 | SF3b160/SAP155_Subun | Hsh155 | osSAP155-3 | 2 | r | 2599189 | 2604031 | HEAT 1; ARM 2; SAP | |||
1.3 | 203 | LOC_Os02g27790.1 | SF3b160/SAP155_Subun | Hsh155 | osSAP155-4 | 2 | f | 16443666 | 16447615 | HEAT 1; ARM 2; SAP | |||
1.3 | 222 | LOC_Os02g58090.1 | SF3b150/SAP145_Subun | Cus1p | osSF3b150 | 2 | f | 35547983 | 35553043 | PSP 1; DUF382 1 | |||
1.3 | 222 | LOC_Os02g58090.2 | SF3b150/SAP145_Subun | Cus1p | osSF3b150 | 2 | f | 35547983 | 35550002 | PSP 1; DUF382 1 | |||
1.3 | 228 | LOC_Os04g56760.1 | SF3b_14b/PHP5A | Rds3p | osSF3b_14b/PHP5A-a-1 | 4 | r | 33669289 | 33671446 | UPF0123 1 | |||
1.3 | 228 | LOC_Os05g30410.1 | SF3b_14b/PHP5A | Rds3p | osSF3b_14b/PHP5A-a-2 | 5 | r | 17566686 | 17567018 | UPF0123 1 | |||
1.3 | 256 | LOC_Os02g04480.1 | SF3b120/SAP130_Subun | Rse1p | osSAP130a | 2 | f | 1979693 | 1983630 | CPSF_A 1; WD40-like | |||
1.3 | 347 | LOC_Os03g18720.1 | U2B''_Subunit | Msl1p | osU2B'' | 3 | r | 10477051 | 10481542 | RRM 2 | |||
1.3 | 347 | LOC_Os03g18720.2 | U2B''_Subunit | Msl1p | osU2B'' | 3 | r | 10477051 | 10481518 | RRM 2 | |||
1.3 | 412 | LOC_Os02g13990.1 | U2A'_Subunit | Lea1p | osU2A | 2 | r | 7630852 | 7635234 | LRR 4 | |||
1.3 | 460 | LOC_Os03g59710.1 | p14 | Snu17p | osP14-1 | 3 | f | 33991678 | 33992516 | RRM 1 | |||
1.3 | 461 | LOC_Os03g50850.1 | p14 | Snu17p | osSAP61 | 3 | r | 29032346 | 29038648 | C2H2 1 | |||
1.3 | 461 | LOC_Os03g50850.2 | p14 | Snu17p | osSAP61 | 3 | r | 29032346 | 29038618 | C2H2 1 | |||
1.3 | 466 | LOC_Os08g34480.1 | SF3b_10 | osSF3b10a | 8 | r | 21629340 | 21633614 | SF3b10 1 | ||||
1.3 | 470 | LOC_Os10g31900.1 | SF3b53/SAP49_Subunit | Hsh49p | osSAP49a | 10 | f | 16679518 | 16684010 | RRM 2 | |||
1.3 | 758 | LOC_Os03g15700.1 | SF3a66/SAP62_Subunit | Prp11p | osSAP62 | 3 | r | 8659062 | 8661959 | C2H2 1 | |||
1.4 | 44 | LOC_Os01g52470.1 | 116kD_Subunit/elonga | Snu114p | osU5-116-2a | 1 | r | 30142530 | 30145782 | EFG_C 1; GTP_EFTU | |||
1.4 | 44 | LOC_Os01g53900.1 | 116kD_Subunit/elonga | Snu114p | osU5-116-2b | 1 | f | 30991367 | 30996138 | EFG_C 1; GTP_EFTU | |||
1.4 | 44 | LOC_Os02g32030.1 | 116kD_Subunit/elonga | Snu114p | osU5-116-2c | 2 | f | 18911065 | 18916199 | EFG_C 1; GTP_EFTU | |||
1.4 | 44 | LOC_Os04g02820.1 | 116kD_Subunit/elonga | Snu114p | osU5-116-2d | 4 | f | 1089827 | 1094214 | EFG_C 1; GTP_EFTU | |||
1.4 | 44 | LOC_Os04g02820.2 | 116kD_Subunit/elonga | Snu114p | osU5-116-2d | 4 | f | 1089827 | 1094214 | EFG_C 1; GTP_EFTU | |||
1.4 | 44 | LOC_Os04g02820.3 | 116kD_Subunit/elonga | Snu114p | osU5-116-2d | 4 | f | 1089827 | 1094214 | EFG_C 1; GTP_EFTU | |||
1.4 | 75 | LOC_Os02g01740.1 | 200kD_Subunit/Helica | Brr2p | osU5-200-1 | 2 | f | 410661 | 418523 | DEAD 1; Helicase_C | |||
1.4 | 75 | LOC_Os03g11470.1 | 200kD_Subunit/Helica | Brr2p | osU5-200-2 | 3 | r | 5918915 | 5930373 | DEAD 1; Helicase_C | |||
1.4 | 75 | LOC_Os03g53220.1 | 200kD_Subunit/Helica | Brr2p | osU5-200-3 | 3 | r | 30515962 | 30523987 | DEAD 1; Helicase_C | |||
1.4 | 182 | LOC_Os05g07050.1 | 220kD_Subunit | Prp8p | osU5-220/Prp8a-1 | 5 | r | 3704156 | 3714490 | Mov34 1 | |||
1.4 | 182 | LOC_Os06g07080.1 | 220kD_Subunit | Prp8p | osU5-220/Prp8a-2 | 6 | r | 3362868 | 3367262 | Mov34 1 | |||
1.4 | 259 | LOC_Os03g50090.1 | 100kD_Subunit | Prp28p | osU5-100KD | 3 | r | 28561398 | 28564373 | DEAD 1; Helicase_C | |||
1.4 | 259 | LOC_Os03g50090.2 | 100kD_Subunit | Prp28p | osU5-100KD | 3 | r | 28561797 | 28564373 | DEAD 1; Helicase_C | |||
1.4 | 259 | LOC_Os03g50090.3 | 100kD_Subunit | Prp28p | osU5-100KD | 3 | r | 28560051 | 28564360 | DEAD 1; Helicase_C | |||
1.4 | 259 | LOC_Os03g50090.4 | 100kD_Subunit | Prp28p | osU5-100KD | 3 | r | 28560049 | 28564360 | DEAD 1; Helicase_C | |||
1.4 | 402 | LOC_Os01g15860.1 | 102KD/Prp6-like | Prp6p | osU5-102KD-1 | 1 | f | 8930593 | 8935683 | Ubiquitin 1; TPR 3 | |||
1.4 | 402 | LOC_Os10g35550.1 | 102KD/Prp6-like | Prp6p | osU5-102KD-2 | 10 | r | 18938237 | 18942831 | Ubiquitin 1; TPR 3 | |||
1.4 | 405 | LOC_Os02g33850.1 | 116kD_Subunit/elonga | Snu114p | osU5-116-3a | 2 | r | 20173145 | 20176162 | EFG_C 1; GTP_EFTU | |||
1.4 | 405 | LOC_Os03g44780.1 | 116kD_Subunit/elonga | Snu114p | osU5-116-3b | 3 | f | 25249048 | 25252404 | EFG_C 1; GTP_EFTU | |||
1.4 | 413 | LOC_Os06g40600.1 | 116kD_Subunit/elonga | Snu114p | osU5-116-1a | 6 | r | 24205618 | 24211572 | EFG_C 1; GTP_EFTU 1 | |||
1.4 | 637 | LOC_Os07g10256.1 | 15kD_Subunit | Dib1p | osU5-15-1 | 7 | r | 5507052 | 5509796 | DIMI 1; Thioredoxin | |||
1.4 | 637 | LOC_Os10g34520.1 | 15kD_Subunit | Dib1p | osU5-15-2 | 10 | f | 18340063 | 18342842 | DIMI 1; Thioredoxin | |||
1.4 | 755 | LOC_Os06g44370.1 | 40kD_Subunit | osU5-40 | 6 | r | 26777841 | 26780802 | WD-40 7 | ||||
1.4 | 1099 | LOC_Os02g40450.1 | 200kD_Subunit/Helica | Brr2p | osU5-200-3 | 2 | f | 24512358 | 24521364 | DEAD 1; Sec63 1; Ru | |||
1.5 | 223 | LOC_Os03g13800.1 | U4/U6-15.5K | Snu13p | osTri15.5-1a | 3 | f | 7475176 | 7477174 | Ribosomal_L7Ae 1 | |||
1.5 | 260 | LOC_Os04g46890.1 | U4/U6-61KD | Prp31 | osU5-61/Prp31a-1 | 4 | f | 27606661 | 27611264 | Nop 1 | |||
1.5 | 260 | LOC_Os04g46890.2 | U4/U6-61KD | Prp31 | osU5-61/Prp31a-1 | 4 | f | 27606661 | 27611264 | Nop 1 | |||
1.5 | 260 | LOC_Os04g46890.3 | U4/U6-61KD | Prp31 | osU5-61/Prp31a-1 | 4 | f | 27606661 | 27611264 | Nop 1 | |||
1.5 | 260 | LOC_Os07g04850.1 | U4/U6-61KD | Prp31 | osU5-61/Prp31a-2 | 7 | f | 2143151 | 2150825 | Nop 1 | |||
1.5 | 260 | LOC_Os07g04850.2 | U4/U6-61KD | Prp31 | osU5-61/Prp31a-2 | 7 | f | 2143164 | 2150800 | Nop 1 | |||
1.5 | 260 | LOC_Os07g04850.3 | U4/U6-61KD | Prp31 | osU5-61/Prp31a-2 | 7 | f | 2143161 | 2150800 | Nop 1 | |||
1.5 | 411 | LOC_Os09g07500.1 | U4/U6-90K/SAP90 | Prp3p | osSAP90-1 | 9 | r | 3750007 | 3752649 | ||||
1.5 | 411 | LOC_Os09g07500.2 | U4/U6-90K/SAP90 | Prp3p | osSAP90-1 | 9 | r | 3750007 | 3752652 | ||||
1.5 | 411 | LOC_Os09g07500.3 | U4/U6-90K/SAP90 | Prp3p | osSAP90-1 | 9 | r | 3750007 | 3753991 | ||||
1.5 | 756 | LOC_Os03g23909.1 | U4/U6-60K/SAP60 | Prp4p | osSAP60 | 3 | f | 13569721 | 13576074 | WD-40 7;SFM 1;WD40 | |||
1.6 | 399 | LOC_Os02g30730.1 | Tri-110KD | SAD1 | osTri110 | 2 | r | 18305661 | 18311428 | SART-1 1 | |||
1.6 | 399 | LOC_Os02g30730.2 | Tri-110KD | SAD1 | osTri110 | 2 | r | 18305663 | 18311428 | SART-1 1 | |||
1.6 | 634 | LOC_Os02g26349.1 | (U4/U6.U5) | Tri-27kD/RY1 | osTri-27kD/RY1 | 2 | r | 15462135 | 15471529 | ||||
1.6 | 634 | LOC_Os02g26349.2 | (U4/U6.U5) | Tri-27kD/RY1 | osTri-27kD/RY1 | 2 | r | 15462135 | 15471529 | ||||
1.6 | 638 | LOC_Os09g24250.1 | Tri-65_KD | Snu66p | osTri65a | 9 | r | 14393486 | 14398473 | UCH 1; ZnF_UBP 1 | |||
1.6 | 753 | LOC_Os03g61640.1 | hSnu23/FLJ31121 | Snu23p | osSnu23 | 3 | f | 34934472 | 34937525 | ZnF_U1 1 | |||
1.7 | 225 | LOC_Os04g56770.1 | U11/U12-25K | (-99_protein) | osU11/U12-25K | 4 | f | 33671620 | 33673950 | C2H2 1 | |||
1.7 | 346 | LOC_Os03g21020.1 | U11/U12-65K | osU11/U12-65K | 3 | r | 11923186 | 11928435 | RRM 2;PHOSPHOPANTET | ||||
1.7 | 982 | LOC_Os09g33870.1 | U11/U12-35K | osU11/U12-35kD | 9 | f | 19996519 | 19999313 | RRM 1 | ||||
1.7 | 1101 | LOC_Os09g37720.1 | U11/U12-31K | (MADP1) | osU11/U12-31K | 9 | r | 21742122 | 21743113 | RRM 1; CCHC 1 |
2. Splicing factors
Group |
CIWOG |
Gene |
hHomologs |
SeHomologs |
Gene Name |
Chr |
str |
from |
to |
Txn |
Domains |
Transcripts |
|
2.1 | 49 | LOC_Os05g48960.1 | U2AF35 | osU2AF35/AUS | 5 | f | 28017569 | 28020318 | RRM 1; CCHC 2; | ||||
2.1 | 49 | LOC_Os05g48960.2 | U2AF35 | osU2AF35/AUS | 5 | f | 28017569 | 28020318 | RRM 1; CCHC 2; | ||||
2.1 | 49 | LOC_Os05g48960.3 | U2AF35 | osU2AF35/AUS | 5 | f | 28017569 | 28020318 | RRM 1; CCHC 2; | ||||
2.1 | 49 | LOC_Os05g48960.4 | U2AF35 | osU2AF35/AUS | 5 | f | 28017569 | 28020318 | RRM 1; CCHC 2; | ||||
2.1 | 55 | LOC_Os11g41820.1 | U2AF65 | osU2AF65a/AULb | 11 | r | 24682543 | 24687296 | RRM 3; | ||||
2.1 | 55 | LOC_Os11g45590.1 | U2AF65 | osU2AF65a/AULb | 11 | f | 27119365 | 27124615 | RRM 3; | ||||
2.1 | 55 | LOC_Os11g45590.2 | U2AF65 | osU2AF65a/AULb | 11 | f | 27119365 | 27124615 | RRM 3; | ||||
2.1 | 55 | LOC_Os11g45590.3 | U2AF65 | osU2AF65a/AULb | 11 | f | 27119365 | 27124615 | RRM 3; | ||||
2.1 | 72 | LOC_Os01g43170.1 | PTB/hnRNP_I | osPTB2a | 1 | r | 24632700 | 24638232 | RRM 2 | ||||
2.1 | 72 | LOC_Os01g43170.2 | PTB/hnRNP_I | osPTB2a | 1 | r | 24632700 | 24638232 | RRM 2 | ||||
2.1 | 72 | LOC_Os01g43170.3 | PTB/hnRNP_I | osPTB2a | 1 | r | 24632721 | 24638232 | RRM 2 | ||||
2.1 | 72 | LOC_Os08g33830.1 | PTB/hnRNP_I | osPTB2b | 8 | r | 21170705 | 21176488 | RRM 2 | ||||
2.1 | 72 | LOC_Os08g33830.2 | PTB/hnRNP_I | osPTB2b | 8 | r | 21170705 | 21176488 | RRM 2 | ||||
2.1 | 169 | LOC_Os01g64770.1 | PTB/hnRNP_I | osPTB1-1 | 1 | f | 37579409 | 37584185 | RRM 4 | ||||
2.1 | 169 | LOC_Os01g64770.2 | PTB/hnRNP_I | osPTB1-1 | 1 | f | 37579409 | 37584185 | RRM 4 | ||||
2.1 | 169 | LOC_Os05g36120.1 | PTB/hnRNP_I | osPTB1-2 | 5 | r | 21352461 | 21358180 | RRM 4 | ||||
2.1 | 169 | LOC_Os05g36120.2 | PTB/hnRNP_I | osPTB1-2 | 5 | r | 21352461 | 21358180 | RRM 4 | ||||
2.1 | 169 | LOC_Os05g36120.3 | PTB/hnRNP_I | osPTB1-2 | 5 | r | 21352467 | 21356740 | RRM 4 | ||||
2.1 | 398 | LOC_Os04g31620.1 | SF1/BBP | osSF1/BBP | 4 | f | 18761835 | 18766210 | RRM 1; CCHC 2; KH | ||||
2.1 | 409 | LOC_Os01g72650.1 | U2AF65 | osAUL2-1 | 1 | f | 42148666 | 42155808 | RRM 1 | ||||
2.1 | 409 | LOC_Os03g04520.2 | U2AF65 | osAUL2-2 | 3 | r | 2102185 | 2111148 | RRM 1 | ||||
2.1 | 409 | LOC_Os03g04520.3 | U2AF65 | osAUL2-2 | 3 | r | 2103686 | 2111148 | RRM 1 | ||||
2.1 | 409 | LOC_Os03g04520.4 | U2AF65 | osAUL2-2 | 3 | f | 2102185 | 2111148 | RRM 1 | ||||
2.1 | 481 | LOC_Os03g22570.1 | CBP80 | Cbc2p | mtCBP80 | 3 | f | 12974849 | 12986966 | MIF4G 1; ARM 3 | |||
2.1 | 481 | LOC_Os03g22570.2 | CBP80 | Cbc2p | osCBP80 | 3 | f | 12974849 | 12986966 | MIF4G 1; ARM 3 | |||
2.1 | 553 | LOC_Os02g35150.1 | U2AF35_related_prote | osUrp | 2 | f | 21104860 | 21110616 | RRM 1; CCCH 2 | ||||
2.1 | 635 | LOC_Os02g39890.1 | CBP20 | Cbc1 | osCBP20 | 2 | r | 24094209 | 24097624 | RRM 1 | |||
2.2 | 25 | LOC_Os03g22380.1 | SF2/ASF | osSRp30-1 | 3 | f | 12813298 | 12818086 | RRM 2 | ||||
2.2 | 25 | LOC_Os03g22380.2 | SF2/ASF | osSRp30-1 | 3 | f | 12813298 | 12816444 | RRM 2 | ||||
2.2 | 25 | LOC_Os03g22380.3 | SF2/ASF | osSRp30-1 | 3 | f | 12813298 | 12816444 | RRM 2 | ||||
2.2 | 25 | LOC_Os05g30140.1 | SF2/ASF | osSRp34-2 | 5 | f | 17385770 | 17392938 | RRM 2 | ||||
2.2 | 25 | LOC_Os05g30140.2 | SF2/ASF | osSRp34-2 | 5 | f | 17385770 | 17392938 | RRM 2 | ||||
2.2 | 25 | LOC_Os07g47630.1 | SF2/ASF | osSRp30-3 | 7 | r | 28468080 | 28473190 | RRM 2 | ||||
2.2 | 25 | LOC_Os07g47630.2 | SF2/ASF | osSRp30-3 | 7 | r | 28468080 | 28472907 | RRM 2 | ||||
2.2 | 25 | LOC_Os07g47630.3 | SF2/ASF | osSRp30-3 | 7 | r | 28468080 | 28473164 | RRM 2 | ||||
2.2 | 25 | LOC_Os07g47630.4 | SF2/ASF | osSRp30-3 | 7 | r | 28468080 | 28473190 | RRM 2 | ||||
2.2 | 25 | LOC_Os07g47630.6 | SF2/ASF | osSRp30-3 | 7 | r | 28468080 | 28473190 | RRM 2 | ||||
2.2 | 25 | LOC_Os07g47630.7 | SF2/ASF | osSRp30-3 | 7 | r | 28468080 | 28473190 | RRM 2 | ||||
2.2 | 25 | LOC_Os07g47630.8 | SF2/ASF | osSRp30-3 | 7 | r | 28468080 | 28473164 | RRM 2 | ||||
2.2 | 31 | LOC_Os02g39720.2 | 9G8 | osRSZp22-1 | 2 | r | 23986317 | 23990524 | RRM 1; CCHC 1 | ||||
2.2 | 31 | LOC_Os02g39720.3 | 9G8 | osRSZp22-1 | 2 | r | 23986317 | 23990524 | RRM 1; CCHC 1 | ||||
2.2 | 31 | LOC_Os02g39720.4 | 9G8 | osRSZp22-1 | 2 | r | 23986256 | 23990524 | RRM 1; CCHC 1 | ||||
2.2 | 31 | LOC_Os02g39720.6 | 9G8 | osRSZp22-1 | 2 | r | 23986317 | 23990490 | RRM 1; CCHC 1 | ||||
2.2 | 31 | LOC_Os06g08840.1 | 9G8 | osRSZp22-2 | 6 | f | 4427675 | 4431310 | RRM 1; CCHC 1 | ||||
2.2 | 31 | LOC_Os06g08840.2 | 9G8 | osRSZp22-2 | 6 | f | 4427667 | 4431337 | RRM 1; CCHC 1 | ||||
2.2 | 31 | LOC_Os06g08840.3 | 9G8 | osRSZp22-2 | 6 | f | 4427667 | 4431315 | RRM 1; CCHC 1 | ||||
2.2 | 31 | LOC_Os06g08840.4 | 9G8 | osRSZp22-2 | 6 | f | 4427667 | 4431336 | RRM 1; CCHC 1 | ||||
2.2 | 31 | LOC_Os06g08840.5 | 9G8 | osRSZp22-2 | 6 | f | 4427667 | 4431337 | RRM 1; CCHC 1 | ||||
2.2 | 31 | LOC_Os06g08840.6 | 9G8 | osRSZp22-2 | 6 | f | 4427667 | 4431337 | RRM 1; CCHC 1 | ||||
2.2 | 31 | LOC_Os06g08840.7 | 9G8 | osRSZp22-2 | 6 | f | 4427667 | 4431337 | RRM 1; CCHC 1 | ||||
2.2 | 31 | LOC_Os06g08840.8 | 9G8 | osRSZp22-2 | 6 | f | 4427667 | 4431337 | RRM 1; CCHC 1 | ||||
2.2 | 61 | LOC_Os07g43050.1 | SC35 | osSC35-1 | 7 | f | 25792526 | 25796707 | RRM 1; | ||||
2.2 | 61 | LOC_Os07g43050.2 | SC35 | osSC35-1 | 7 | f | 25792526 | 25796707 | RRM 1; | ||||
2.2 | 61 | LOC_Os07g43050.3 | SC35 | osSC35-1 | 7 | f | 25792526 | 25796707 | RRM 1; | ||||
2.2 | 61 | LOC_Os08g37960.1 | SC35 | osSC35-2 | 8 | r | 24037435 | 24040588 | RRM 1; | ||||
2.2 | 61 | LOC_Os08g37960.2 | SC35 | osSC35-2 | 8 | r | 24037523 | 24040588 | RRM 1; | ||||
2.2 | 61 | LOC_Os08g37960.3 | SC35 | osSC35-2 | 8 | r | 24037526 | 24040588 | RRM 1; | ||||
2.2 | 151 | LOC_Os03g25770.1 | TASR-2 | osSCL33-1 | 3 | r | 14750052 | 14753591 | RRM 1 | ||||
2.2 | 151 | LOC_Os03g25770.2 | TASR-2 | osSCL33-1 | 3 | r | 14750052 | 14753600 | RRM 1 | ||||
2.2 | 151 | LOC_Os07g43950.1 | TASR-2 | osSCL33-2 | 7 | f | 26264500 | 26267679 | RRM 1 | ||||
2.2 | 204 | LOC_Os02g03040.1 | Plant_Novel_SR_prote | osRSp41 | 2 | r | 1193366 | 1197056 | RRM 2 | ||||
2.2 | 204 | LOC_Os02g03040.2 | Plant_Novel_SR_prote | osRSp41 | 2 | r | 1193388 | 1197056 | RRM 2 | ||||
2.2 | 204 | LOC_Os02g03040.3 | Plant_Novel_SR_prote | osRSp41 | 2 | r | 1193366 | 1197056 | RRM 2 | ||||
2.2 | 204 | LOC_Os02g03040.4 | Plant_Novel_SR_prote | osRSp40 | 2 | r | 1193366 | 1197056 | RRM 2 | ||||
2.2 | 226 | LOC_Os04g02870.1 | Plant_Novel_SR_prote | osRSp31 | 4 | r | 1116074 | 1120563 | RRM 2 | ||||
2.2 | 226 | LOC_Os04g02870.2 | Plant_Novel_SR_prote | osRSp31 | 4 | r | 1116159 | 1120473 | RRM 2 | ||||
2.2 | 226 | LOC_Os04g02870.3 | Plant_Novel_SR_prote | osRSp31 | 4 | r | 1116159 | 1120550 | RRM 2 | ||||
2.2 | 226 | LOC_Os04g02870.4 | Plant_Novel_SR_prote | osRSp31 | 4 | r | 1116159 | 1120560 | RRM 2 | ||||
2.2 | 292 | LOC_Os02g15310.1 | TASR-2 | osSCL30-1 | 2 | r | 8553856 | 8558163 | RRM 1 | ||||
2.2 | 292 | LOC_Os02g15310.2 | TASR-2 | osSCL30-1 | 2 | r | 8553856 | 8558164 | RRM 1 | ||||
2.2 | 292 | LOC_Os02g15310.3 | TASR-2 | osSCL30-1 | 2 | r | 8553856 | 8558163 | RRM 1 | ||||
2.2 | 292 | LOC_Os02g15310.4 | TASR-2 | osSCL30-1 | 2 | r | 8553856 | 8558164 | RRM 1 | ||||
2.2 | 292 | LOC_Os12g38430.1 | TASR-2 | osSCL30-2 | 12 | r | 23556090 | 23559945 | RRM 1 | ||||
2.2 | 978 | LOC_Os03g24890.1 | TASR-2 | osSCL28-1 | 3 | f | 14175086 | 14179731 | RRM 1 | ||||
2.2 | 978 | LOC_Os03g24890.2 | TASR-2 | osSCL28-1 | 3 | f | 14175086 | 14178083 | RRM 1 | ||||
2.3 | 13 | LOC_Os03g19960.1 | hPrp43 | Prp43p | osPrp43 | 3 | f | 11236504 | 11240322 | DEAD 1; Helicase_C | |||
2.3 | 13 | LOC_Os03g19960.2 | hPrp43 | Prp43p | osPrp43 | 3 | f | 11236504 | 11240322 | DEAD 1; Helicase_C | |||
2.3 | 255 | LOC_Os02g08360.1 | SR140 | osSR140-1 | 2 | f | 4440181 | 4448765 | Surp 1;RRM 1;RPR 1 | ||||
2.3 | 549 | LOC_Os08g01840.1 | SPF30 | osSPF30 | 8 | r | 512747 | 517277 | Tudor 1 | ||||
2.3 | 647 | LOC_Os01g34190.1 | SPF45 | osSPF45 | 1 | f | 18846925 | 18850770 | DIII/G-patch domain | ||||
2.4 | 1 | LOC_Os01g62290.1 | HSP73/HSPA8 | OsHSP73-1 | 1 | f | 36038663 | 36042467 | Hsp70 1; | ||||
2.4 | 1 | LOC_Os01g62290.2 | HSP73/HSPA8 | OsHSP73-1 | 1 | f | 36038663 | 36042467 | Hsp70 1; | ||||
2.4 | 1 | LOC_Os02g02410.1 | HSP73/HSPA8 | OsHSP73-2 | 2 | r | 838717 | 842672 | Hsp70 1; | ||||
2.4 | 1 | LOC_Os03g16860.1 | HSP73/HSPA8 | OsHSP73-3 | 3 | f | 9369095 | 9372019 | Hsp70 1; | ||||
2.4 | 1 | LOC_Os03g16860.2 | HSP73/HSPA8 | OsHSP73-3 | 3 | f | 9369095 | 9372018 | Hsp70 1; | ||||
2.4 | 1 | LOC_Os03g16880.1 | HSP73/HSPA8 | OsHSP73-4 | 3 | r | 9376828 | 9381528 | Hsp70 1; | ||||
2.4 | 1 | LOC_Os03g16920.1 | HSP73/HSPA8 | OsHSP73-5 | 3 | r | 9410430 | 9415018 | Hsp70 1; | ||||
2.4 | 1 | LOC_Os03g50250.1 | HSP73/HSPA8 | OsHSP73-6 | 3 | f | 28640139 | 28642623 | Hsp70 1; | ||||
2.4 | 1 | LOC_Os03g60620.1 | HSP73/HSPA8 | OsHSP73-7 | 3 | f | 34439193 | 34443814 | Hsp70 1; | ||||
2.4 | 1 | LOC_Os05g30480.1 | HSP73/HSPA8 | OsHSP73-8 | 5 | r | 17599238 | 17601247 | Hsp70 1; | ||||
2.4 | 1 | LOC_Os05g35400.1 | HSP73/HSPA8 | OsHSP73-9 | 5 | r | 20971210 | 20973482 | Hsp70 1; | ||||
2.4 | 1 | LOC_Os05g38530.1 | HSP73/HSPA8 | OsHSP73-10 | 5 | r | 22536798 | 22540022 | Hsp70 1; | ||||
2.4 | 1 | LOC_Os08g09770.1 | HSP73/HSPA8 | OsHSP73-11 | 8 | r | 5644680 | 5646796 | Hsp70 1; | ||||
2.4 | 1 | LOC_Os11g08440.1 | HSP73/HSPA8 | OsHSP73-12 | 11 | f | 4439066 | 4442368 | Hsp70 1; | ||||
2.4 | 1 | LOC_Os11g08445.1 | HSP73/HSPA8 | OsHSP73-13 | 11 | f | 4444544 | 4448126 | Hsp70 1; | ||||
2.4 | 1 | LOC_Os11g08460.1 | HSP73/HSPA8 | OsHSP73-14 | 11 | r | 4462201 | 4465255 | Hsp70 1; | ||||
2.4 | 1 | LOC_Os11g08460.2 | HSP73/HSPA8 | OsHSP73-14 | 11 | r | 4462186 | 4464216 | Hsp70 1; | ||||
2.4 | 1 | LOC_Os11g08470.1 | HSP73/HSPA8 | OsHSP73-15 | 11 | r | 4472523 | 4476556 | Hsp70 1; | ||||
2.4 | 1 | LOC_Os11g47760.1 | HSP73/HSPA8 | OsHSP73-16 | 11 | f | 28281027 | 28285329 | Hsp70 1; | ||||
2.4 | 1 | LOC_Os11g47760.2 | HSP73/HSPA8 | OsHSP73-16 | 11 | f | 28281027 | 28285329 | Hsp70 1; | ||||
2.4 | 1 | LOC_Os11g47760.3 | HSP73/HSPA8 | OsHSP73-16 | 11 | f | 28281027 | 28285329 | Hsp70 1; | ||||
2.4 | 1 | LOC_Os11g47760.4 | HSP73/HSPA8 | OsHSP73-16 | 11 | f | 28283211 | 28285329 | Hsp70 1; | ||||
2.4 | 1 | LOC_Os11g47760.5 | HSP73/HSPA8 | OsHSP73-16 | 11 | f | 28281027 | 28285329 | Hsp70 1; | ||||
2.4 | 1 | LOC_Os11g47760.6 | HSP73/HSPA8 | OsHSP73-16 | 11 | f | 28281027 | 28285329 | Hsp70 1; | ||||
2.4 | 134 | LOC_Os01g63890.1 | G10 | Cwc14p | osG10-1 | 1 | r | 37068351 | 37070869 | G10 1; | |||
2.4 | 134 | LOC_Os04g55290.1 | G10 | Cwc14p | osG10-2 | 4 | r | 32683002 | 32686508 | G10 1; | |||
2.4 | 134 | LOC_Os04g55290.2 | G10 | Cwc14p | osG10-2 | 4 | r | 32683002 | 32686508 | G10 1; | |||
2.4 | 134 | LOC_Os04g55290.5 | G10 | Cwc14p | osG10-2 | 4 | r | 32683002 | 32686508 | G10 1; | |||
2.4 | 134 | LOC_Os05g37390.1 | G10 | Cwc14p | osG10-3 | 5 | f | 21813379 | 21815895 | G10 1; | |||
2.4 | 134 | LOC_Os05g37390.2 | G10 | Cwc14p | osG10-3 | 5 | f | 21813379 | 21815897 | G10 1; | |||
2.4 | 167 | LOC_Os05g22260.1 | hSyf3/CRN | Clf1/Syf3p | osCRN1a-1 | 5 | r | 12544047 | 12549054 | TPR 1; HAT 14; TPR | |||
2.4 | 167 | LOC_Os05g22260.2 | hSyf3/CRN | Clf1/Syf3p | osCRN1a-1 | 5 | r | 12544047 | 12549054 | TPR 1; HAT 14; TPR | |||
2.4 | 167 | LOC_Os06g33250.1 | hSyf3/CRN | Clf1/Syf3p | osCRN1a-2 | 6 | f | 19356235 | 19359928 | TPR 1; HAT 14; TPR | |||
2.4 | 168 | LOC_Os02g02890.1 | hSyf3/CRN | Clf1/Syf3p | osCypE1a | 2 | f | 1116059 | 1117136 | Pro_isomerase 1 | |||
2.4 | 288 | LOC_Os01g49270.1 | hSyf1 | Syf1p | osSyf1-1 | 1 | f | 28321617 | 28323944 | TPR 1;HAT 10;TPRli | |||
2.4 | 288 | LOC_Os06g12910.1 | hSyf1 | Syf1p | osSyf1-2 | 6 | r | 7066118 | 7068523 | TPR 1;HAT 10;TPRli | |||
2.4 | 288 | LOC_Os07g44970.1 | hSyf1 | Syf1p | osSyf1-3 | 7 | r | 26818298 | 26823312 | TPR 1;HAT 10;TPRli | |||
2.4 | 297 | LOC_Os06g07350.1 | hECM2 | Ecm2p | osECM2-1a-1 | 6 | r | 3535683 | 3539239 | RRM 1; CCCH 1 | |||
2.4 | 297 | LOC_Os07g18050.1 | hECM2 | Ecm2p | osECM2-1a-2 | 7 | r | 10677648 | 10682117 | RRM 1; CCCH 1 | |||
2.4 | 407 | LOC_Os01g16010.1 | SPF27/BCAS2 | osSPF27 | 1 | f | 9012002 | 9015711 | BCAS2 1 | ||||
2.4 | 407 | LOC_Os01g16010.2 | SPF27/BCAS2 | osSPF27 | 1 | f | 9012002 | 9015711 | BCAS2 1 | ||||
2.4 | 414 | LOC_Os10g32880.1 | hPrp19 | Prp19p | osPrp19a | 10 | r | 17132649 | 17138899 | WD-40 7; Ubox 1 | |||
2.4 | 467 | LOC_Os03g21990.1 | PRL1 | Prp46p | osPRL1 | 3 | f | 12598185 | 12604518 | WD-40 2;WD40like 1 | |||
2.4 | 471 | LOC_Os06g49740.1 | GCIP_p29 | Syf2 | osGCIPp29 | 6 | f | 30086160 | 30088574 | ||||
2.4 | 546 | LOC_Os06g01700.1 | AD-002 | Cwc15p | osAD-002 | 6 | r | 412319 | 415045 | Cwf_Cwc_15 1 | |||
2.4 | 559 | LOC_Os04g28090.1 | CDC5 | Cef1 | osCDC5 | 4 | f | 16407910 | 16415223 | SANT 2 | |||
2.4 | 640 | LOC_Os02g58460.1 | beta_catenin-like_1 | osCTNNNBL1 | 2 | r | 35741361 | 35745423 | Armadillo 1; ARM 1 | ||||
2.4 | 642 | LOC_Os03g26960.1 | KIAA0560 | osAquarius | 3 | f | 15409079 | 15418249 | |||||
2.4 | 645 | LOC_Os02g52250.1 | SKIP | Prp45p | osSKIP | 2 | r | 31989349 | 31991828 | SKIP/SNW 1 | |||
2.4 | 866 | LOC_Os06g51420.1 | MGC23918 | osMGC23918 | 6 | f | 31146903 | 31149547 | |||||
2.4 | 983 | LOC_Os08g44520.2 | PPIase-like_1 | osPPIase-like1-1 | 8 | r | 27997051 | 27999634 | Pro_isomerase 1 | ||||
2.4 | 983 | LOC_Os08g44520.3 | PPIase-like_1 | osPPIase-like1-2 | 8 | r | 27997051 | 27999675 | Pro_isomerase 1 | ||||
2.4 | 1100 | LOC_Os02g39050.1 | hIsy1 | Isy1p | osIsy1 | 2 | r | 23572529 | 23574978 | Lsy1 1 | |||
2.5 | 122 | LOC_Os12g44330.1 | hPrp4 | kinase | osPRP4K-1 | 12 | r | 27446516 | 27452843 | Pkinase 1;TyrKc 1; | |||
2.5 | 122 | LOC_Os12g44330.2 | hPrp4 | kinase | osPRP4K-1 | 12 | r | 27447669 | 27452929 | Pkinase 1;TyrKc 1; | |||
2.5 | 220 | LOC_Os07g22220.1 | TBL1-rp_1 | osTBL1-rp1 | 7 | f | 12423067 | 12439493 | WD-40 5; Peptidease | ||||
2.5 | 464 | LOC_Os05g03550.1 | N-CoR1 | osN-CoR1 | 5 | r | 1501022 | 1507823 | SANT 2;Homeodomain_ | ||||
2.5 | 474 | LOC_Os06g11170.1 | FBP-21 | osFBP21 | 6 | r | 5856236 | 5860127 | C2H2 1 | ||||
2.5 | 474 | LOC_Os06g11170.2 | FBP-21 | osFBP21 | 6 | r | 5856236 | 5860127 | C2H2 1 | ||||
2.5 | 868 | LOC_Os01g68760.1 | NPW38 | osNPW38 | 1 | r | 39937710 | 39943845 | WW 2 | ||||
2.6 | 65 | LOC_Os03g17010.1 | ALY | osALY-1a | 3 | r | 9448241 | 9452039 | RRM 1; | ||||
2.6 | 65 | LOC_Os03g17010.2 | ALY | osALY-1a | 3 | r | 9448241 | 9452039 | RRM 1; | ||||
2.6 | 65 | LOC_Os03g17010.3 | ALY | osALY-1a | 3 | r | 9448241 | 9452039 | RRM 1; | ||||
2.6 | 65 | LOC_Os11g01020.1 | ALY | osALY-1b | 11 | f | 2948 | 6498 | RRM 1; | ||||
2.6 | 65 | LOC_Os11g01020.2 | ALY | osALY-1b | 11 | f | 2948 | 6498 | RRM 1; | ||||
2.6 | 65 | LOC_Os12g01010.1 | ALY | osALY-1c | 12 | f | 1682 | 4428 | RRM 1; | ||||
2.6 | 80 | LOC_Os01g36890.1 | UAP56 | osUAP56-1 | 1 | f | 20539784 | 20546067 | DEAD 1; Helicase_C | ||||
2.6 | 80 | LOC_Os01g36890.2 | UAP56 | osUAP56-1 | 1 | f | 20539784 | 20546067 | DEAD 1; Helicase_C | ||||
2.6 | 80 | LOC_Os01g36920.1 | UAP56 | osUAP56-2 | 1 | f | 20569908 | 20575176 | DEAD 1; Helicase_C | ||||
2.6 | 80 | LOC_Os01g36920.2 | UAP56 | osUAP56-2 | 1 | f | 20569908 | 20575176 | DEAD 1; Helicase_C | ||||
2.6 | 227 | LOC_Os08g33120.1 | ALY | osALY-2a | 8 | r | 20575999 | 20580783 | RRM 1 | ||||
2.6 | 227 | LOC_Os08g33120.2 | ALY | osALY-2a | 8 | r | 20575999 | 20579513 | RRM 1 | ||||
2.6 | 227 | LOC_Os08g33120.3 | ALY | osALY-2a | 8 | r | 20575999 | 20579513 | RRM 1 | ||||
2.6 | 227 | LOC_Os08g33120.5 | ALY | osALY-2a | 8 | r | 20575999 | 20579513 | RRM 1 | ||||
2.6 | 342 | LOC_Os03g16369.1 | Srm160-like | osSRM102 | 3 | r | 9028402 | 9034275 | PWI 1 | ||||
2.6 | 342 | LOC_Os03g16369.2 | Srm160-like | osSRM102 | 3 | r | 9027709 | 9034275 | PWI 1 | ||||
2.6 | 345 | LOC_Os01g72890.1 | RNPS1 | osSR45/osRNPS1 | 1 | f | 42274499 | 42279523 | RRM 1 | ||||
2.6 | 345 | LOC_Os01g72890.2 | RNPS1 | osSR45/osRNPS1 | 1 | f | 42274499 | 42279523 | RRM 1 | ||||
2.6 | 348 | LOC_Os12g18880.1 | Magoh | osMagoh | 12 | f | 10956867 | 10960042 | Mago_nashi 1 | ||||
2.6 | 417 | LOC_Os01g45190.1 | Nuk-34/eIF4A3/DDX48 | osDDX48/eIF4A3-1a | 1 | f | 25635906 | 25639519 | DEAD 1; Helicase_C | ||||
2.6 | 417 | LOC_Os03g36930.1 | Nuk-34/eIF4A3/DDX48 | osDDX48/eIF4A3-1b | 3 | r | 20490889 | 20495422 | DEAD 1; Helicase_C | ||||
2.6 | 480 | LOC_Os05g04850.1 | Y14 | osY14 | 5 | f | 2331034 | 2334253 | RRM 1; RBMB 4 | ||||
2.6 | 650 | LOC_Os03g49520.1 | pinin | osPinin | 3 | r | 28179255 | 28183169 | Pinin/SDK/memA 1 | ||||
2.7 | 13 | LOC_Os02g19860.1 | Prp22 | Prp22 | osPrp22 | 2 | f | 11668274 | 11673601 | DEAD 1; Helicase_C | |||
2.7 | 13 | LOC_Os06g23530.1 | Prp22 | Prp22 | osPrp22 | 6 | r | 13722595 | 13726111 | DEAD 1; Helicase_C | |||
2.7 | 415 | LOC_Os07g38420.1 | Prp18 | Prp18 | osPrp18-1 | 7 | r | 23086571 | 23089928 | Prp18 1; SFM 1 | |||
2.7 | 416 | LOC_Os03g27970.1 | Prp18 | Prp18 | osPrp17-1 | 3 | f | 16064517 | 16067956 | WD-40 7; | |||
2.7 | 416 | LOC_Os03g27970.2 | Prp18 | Prp18 | osPrp17-1 | 3 | f | 16064517 | 16068090 | WD-40 7; | |||
2.7 | 551 | LOC_Os08g03390.1 | Slu7 | Slu7p | osSLU7-1a | 8 | f | 1584128 | 1588010 | ||||
2.7 | 551 | LOC_Os08g03390.2 | Slu7 | Slu7p | osSLU7-1a | 8 | f | 1584128 | 1587229 | ||||
2.7 | 747 | LOC_Os02g21490.1 | Prp17 | Prp17p | osPrp17 | 2 | r | 12741599 | 12746532 | WD-40 6 | |||
2.7 | 1102 | LOC_Os11g20554.1 | Prp22 | Prp22 | osPrp22-3 | 11 | f | 11903086 | 11919239 | DEAD 1;Helicase_C | |||
2.7 | 1103 | LOC_Os06g09280.1 | Prp22 | Prp22 | osPrp22-2 | 6 | f | 4658378 | 4666062 | DEAD 1;Helicase_C | |||
2.8 | 13 | LOC_Os05g32370.1 | Prp2 | osPrp2 | 5 | r | 18809801 | 18813383 | DEAD 1; Helicase_C | ||||
2.8 | 13 | LOC_Os07g32430.1 | Prp2 | osPrp2-1a | 7 | r | 19289890 | 19298101 | DEAD 1; Helicase_C | ||||
2.8 | 13 | LOC_Os08g24760.1 | Prp2 | osPrp2 | 8 | r | 14978687 | 14989614 | DEAD 1; Helicase_C | ||||
2.8 | 293 | LOC_Os01g01150.1 | SRm300 | osSRM300like | 1 | f | 71775 | 76699 | RRM 1; Filamin/ABP28 | ||||
2.8 | 293 | LOC_Os01g01150.2 | SRm300 | osSRM300like | 1 | f | 71775 | 77702 | RRM 1; Filamin/ABP28 | ||||
2.8 | 293 | LOC_Os01g01150.3 | SRm300 | osSRM300like | 1 | f | 71775 | 78938 | RRM 1; Filamin/ABP28 | ||||
2.8 | 296 | LOC_Os08g05810.1 | Prp5 | osPrp5-1a-1 | 8 | r | 3112975 | 3116299 | DEAD 1; Helicase_C | ||||
2.8 | 296 | LOC_Os08g06344.1 | Prp5 | osPrp5-1a-2 | 8 | r | 3512831 | 3517779 | DEAD 1; Helicase_C | ||||
2.8 | 296 | LOC_Os08g06344.2 | Prp5 | osPrp5-1a-2 | 8 | r | 3512838 | 3517735 | DEAD 1; Helicase_C | ||||
2.8 | 296 | LOC_Os08g06344.3 | Prp5 | osPrp5-1a-2 | 8 | r | 3512923 | 3517735 | DEAD 1; Helicase_C | ||||
2.8 | 478 | LOC_Os03g15890.1 | hTra-2/SFRS10 | osTra/SFRS1 | 3 | r | 8766456 | 8769486 | RRM 1 | ||||
2.8 | 478 | LOC_Os03g15890.2 | hTra-2/SFRS10 | osTra/SFRS1 | 3 | r | 8766456 | 8769474 | RRM 1 | ||||
2.8 | 754 | LOC_Os03g19530.1 | Prp5 | osPrp5 | 3 | f | 10982928 | 10987117 | DEAD 1;Helicase_C | ||||
2.8 | 979 | LOC_Os03g51540.1 | hDbr1 | dbr1 | osDbr1 | 3 | f | 29473359 | 29477934 | Metallophos 1;DBRI |
3. Splicing regulation
Group |
CIWOG |
Gene |
hHomologs |
SeHomologs |
Gene Name |
Chr |
str |
from |
to |
Txn |
Domains |
Transcripts |
|
3.1 | 71 | LOC_Os01g62080.1 | Lammer/CLK | kinase | osAFC1/osAFC2 | 1 | r | 35922823 | 35928936 | Pkinase 1; TyrKc 1 | |||
3.1 | 71 | LOC_Os01g62080.2 | Lammer/CLK | kinase | osAFC1/osAFC2 | 1 | r | 35922757 | 35928936 | Pkinase 1; TyrKc 1 | |||
3.1 | 71 | LOC_Os12g27520.1 | Lammer/CLK | kinase | osAFC1/osAFC2 | 12 | r | 16193418 | 16196784 | Pkinase 1; TyrKc 1 | |||
3.1 | 135 | LOC_Os03g53720.1 | Kinase | SRPK2 | osSRPK2a | 3 | f | 30796201 | 30800304 | Pkinase 1; TyrKc 1 | |||
3.1 | 135 | LOC_Os03g53720.2 | Kinase | SRPK2 | osSRPK2a | 3 | f | 30796201 | 30800304 | Pkinase 1; TyrKc 1 | |||
3.1 | 209 | LOC_Os07g28930.1 | Kinase | SRPK1 | osSRPK1a-1 | 7 | f | 16965940 | 16968971 | Pkinase 1; TyrKc 1 | |||
3.1 | 209 | LOC_Os09g37949.1 | Kinase | SRPK1 | osSRPK1a-2 | 9 | r | 21880614 | 21884141 | Pkinase 1; TyrKc 1 | |||
3.1 | 290 | LOC_Os01g40840.1 | Kinase | Lammer/CLK_kinase | osAFC3 | 1 | f | 23089710 | 23094339 | Pkinase 1;TyrKc 1;S | |||
3.2 | 45 | LOC_Os01g68790.1 | Glycine-Rich_RBD | osGRBP1d/GRBP1c/GRBP1e-1 | 1 | f | 39953486 | 39955480 | RRM 1 | ||||
3.2 | 45 | LOC_Os01g68790.2 | Glycine-Rich_RBD | osGRBP1d/GRBP1c/GRBP1e-1 | 1 | f | 39953486 | 39955480 | RRM 1 | ||||
3.2 | 45 | LOC_Os01g68790.3 | Glycine-Rich_RBD | osGRBP1d/GRBP1c/GRBP1e-1 | 1 | f | 39953486 | 39955641 | RRM 1 | ||||
3.2 | 45 | LOC_Os07g41120.1 | Glycine-Rich_RBD | osGRBP1d/GRBP1c/GRBP1e-2 | 7 | r | 8715810 | 8725322 | RRM 1 | ||||
3.2 | 45 | LOC_Os10g17454.1 | Glycine-Rich_RBD | osGRBP1d/GRBP1c/GRBP1e-3 | 10 | r | 8715810 | 8725381 | RRM 1 | ||||
3.2 | 45 | LOC_Os10g17454.2 | Glycine-Rich_RBD | osGRBP1d/GRBP1c/GRBP1e-3 | 10 | r | 8715810 | 8725381 | RRM 1 | ||||
3.2 | 45 | LOC_Os10g17454.3 | Glycine-Rich_RBD | osGRBP1d/GRBP1c/GRBP1e-3 | 10 | r | 8715810 | 8725381 | RRM 1 | ||||
3.2 | 45 | LOC_Os12g31800.1 | Glycine-Rich_RBD | osGRBP1d/GRBP1c/GRBP1e-4 | 12 | f | 19101360 | 19105214 | RRM 1 | ||||
3.2 | 109 | LOC_Os03g46770.1 | Glycine-Rich_RBD | osGRP7/osGRBP3a-1 | 3 | f | 26453136 | 26454373 | RRM 1 | ||||
3.2 | 109 | LOC_Os12g43600.1 | Glycine-Rich_RBD | osGRP7/osGRBP3a-2 | 12 | f | 27026627 | 27027603 | RRM 1 | ||||
3.3 | 29 | LOC_Os07g39560.1 | hnRNP_A/B | OsRNPA/B-1 | 7 | f | 23703161 | 23707935 | RRM 2 | ||||
3.3 | 29 | LOC_Os07g39560.2 | hnRNP_A/B | OsRNPA/B-1 | 7 | f | 23703929 | 23707935 | RRM 2 | ||||
3.3 | 29 | LOC_Os07g39560.3 | hnRNP_A/B | OsRNPA/B-1 | 7 | f | 23703161 | 23707935 | RRM 2 | ||||
3.3 | 29 | LOC_Os11g41890.1 | hnRNP_A/B | OsRNPA/B-2 | 11 | f | 24726853 | 24731188 | RRM 2 | ||||
3.3 | 149 | LOC_Os01g16090.1 | hnRNP_A/B | osUBA2a | 1 | r | 9062968 | 9065787 | RRM 2 | ||||
3.3 | 257 | LOC_Os01g42820.1 | hnRNP_A/B | osUBA2c | 1 | r | 24368485 | 24371160 | RRM 2 | ||||
3.3 | 257 | LOC_Os01g42820.2 | hnRNP_A/B | osUBA2c | 1 | r | 24367680 | 24371112 | RRM 2 | ||||
3.3 | 257 | LOC_Os01g42820.3 | hnRNP_A/B | osUBA2c | 1 | r | 24367680 | 24371160 | RRM 2 | ||||
3.3 | 418 | LOC_Os10g33230.1 | hnRNP_A/B | osRNPA/B_1 | 10 | f | 17360036 | 17365373 | RRM 2 | ||||
3.3 | 648 | LOC_Os02g12850.1 | hnRNP_A/B | osRNPA/B_8b | 2 | r | 6784169 | 6788332 | RRM 2 | ||||
3.3 | 655 | LOC_Os08g23120.1 | hnRNP_A/B | osRNP_N1 | 8 | f | 13927737 | 13931996 | RRM 2;HUDSXLRNA 2 | ||||
3.4 | 93 | LOC_Os04g45930.1 | hnRNP_R/Q | hnRNP-R3/osPA/B-1 | 4 | f | 27015132 | 27020677 | RRM 3 | ||||
3.4 | 93 | LOC_Os04g45930.2 | hnRNP_R/Q | hnRNP-R3/osPA/B-2 | 4 | f | 27015132 | 27020677 | RRM 3 | ||||
3.4 | 93 | LOC_Os04g45930.3 | hnRNP_R/Q | hnRNP-R3/osPA/B-3 | 4 | f | 27015132 | 27021843 | RRM 3 | ||||
3.4 | 120 | LOC_Os11g04390.1 | hnRNP_R/Q | os-hnRNP-R2a | 11 | f | 1820360 | 1825094 | RRM 3 | ||||
3.4 | 120 | LOC_Os11g04390.2 | hnRNP_R/Q | os-hnRNP-R2a | 11 | f | 1820374 | 1825187 | RRM 3 | ||||
3.4 | 120 | LOC_Os12g04180.1 | hnRNP_R/Q | os-hnRNP-R2b | 12 | f | 1754561 | 1758698 | RRM 3 | ||||
3.4 | 120 | LOC_Os12g04180.2 | hnRNP_R/Q | os-hnRNP-R2b | 12 | f | 1754618 | 1758698 | RRM 3 | ||||
3.4 | 120 | LOC_Os12g04180.3 | hnRNP_R/Q | os-hnRNP-R2b | 12 | f | 1754619 | 1758698 | RRM 3 | ||||
3.4 | 120 | LOC_Os12g04180.4 | hnRNP_R/Q | os-hnRNP-R2b | 12 | f | 1754572 | 1758698 | RRM 3 | ||||
3.4 | 179 | LOC_Os10g06130.1 | hnRNP_R/Q | os-hnRNP-R1a | 10 | r | 3112799 | 3117851 | RRM 3 | ||||
3.4 | 179 | LOC_Os10g06130.2 | hnRNP_R/Q | os-hnRNP-R1a | 10 | r | 3112799 | 3117851 | RRM 3 | ||||
3.4 | 179 | LOC_Os10g06130.3 | hnRNP_R/Q | os-hnRNP-R1a | 10 | r | 3112799 | 3117851 | RRM 3 | ||||
3.4 | 179 | LOC_Os10g06130.4 | hnRNP_R/Q | os-hnRNP-R1a | 10 | r | 3112799 | 3117851 | RRM 3 | ||||
3.4 | 179 | LOC_Os10g06130.5 | hnRNP_R/Q | os-hnRNP-R1a | 10 | r | 3112799 | 3117851 | RRM 3 | ||||
3.4 | 179 | LOC_Os11g14430.1 | hnRNP_R/Q | os-hnRNP-R1b | 11 | r | 8096480 | 8101158 | RRM 3 | ||||
3.4 | 179 | LOC_Os11g14430.2 | hnRNP_R/Q | os-hnRNP-R1b | 11 | r | 8096480 | 8101158 | RRM 3 | ||||
3.4 | 183 | LOC_Os01g71200.1 | CUG-BP | osCUG-BP1-1 | 1 | f | 41192307 | 41197933 | RRM 3; HUDSXLRNA 4 | ||||
3.4 | 183 | LOC_Os05g30980.1 | CUG-BP | osCUG-BP1-2 | 5 | f | 17934689 | 17940498 | RRM 3; HUDSXLRNA 4 | ||||
3.4 | 183 | LOC_Os05g30980.2 | CUG-BP | osCUG-BP1-2 | 5 | f | 17935143 | 17940498 | RRM 3; HUDSXLRNA 4 | ||||
3.4 | 337 | LOC_Os09g03610.1 | _ | osFCA1 | 9 | f | 1789600 | 1798611 | RRM 2; WW 1 | ||||
3.4 | 337 | LOC_Os09g03610.2 | _ | osFCA1 | 9 | f | 1789446 | 1798611 | RRM 2; WW 1 | ||||
3.4 | 337 | LOC_Os09g03610.3 | _ | osFCA1 | 9 | f | 1789608 | 1798611 | RRM 2; WW 1 | ||||
3.4 | 337 | LOC_Os09g03610.4 | _ | osFCA1 | 9 | f | 1789608 | 1798611 | RRM 2; WW 1 | ||||
3.4 | 350 | LOC_Os03g61990.1 | hnRNP_G | os-hnRNP-G2 | 3 | r | 35126977 | 35130215 | RRM 1; CCHC 1 | ||||
3.4 | 350 | LOC_Os03g61990.2 | hnRNP_G | os-hnRNP-G2 | 3 | r | 35126977 | 35130215 | RRM 1; CCHC 1 | ||||
3.4 | 350 | LOC_Os03g61990.3 | hnRNP_G | os-hnRNP-G2 | 3 | r | 35126982 | 35130197 | RRM 1; CCHC 1 | ||||
3.4 | 350 | LOC_Os03g61990.4 | hnRNP_G | os-hnRNP-G2 | 3 | r | 35126982 | 35130215 | RRM 1; CCHC 1 | ||||
3.4 | 350 | LOC_Os03g61990.5 | hnRNP_G | os-hnRNP-G2 | 3 | r | 35126977 | 35130197 | RRM 1; CCHC 1 | ||||
3.4 | 555 | LOC_Os07g19560.1 | hnRNP_P2 | os-hnRNP-P-1 | 7 | r | 11591285 | 11595871 | RRM 1; ZnF_RBZ 2 | ||||
3.4 | 555 | LOC_Os07g19560.2 | hnRNP_P2 | os-hnRNP-P-1 | 7 | r | 11591285 | 11595841 | RRM 1; ZnF_RBZ 2 | ||||
3.4 | 555 | LOC_Os09g12800.1 | hnRNP_P2 | os-hnRNP-P-2 | 9 | r | 7346438 | 7353032 | RRM 1; ZnF_RBZ 2 | ||||
3.4 | 639 | LOC_Os03g42900.1 | hnRNP_E1/E2 | os-hnRNP-E | 3 | f | 23923751 | 23932379 | KH 3 | ||||
3.4 | 639 | LOC_Os03g42900.2 | hnRNP_E1/E2 | os-hnRNP-E | 3 | f | 23923793 | 23932379 | KH 3 | ||||
3.4 | 746 | LOC_Os11g03890.1 | hnRNP_F/hnRNP_H | os-hnRNP-F/AtRNPH/F_1 | 11 | f | 1550980 | 1553325 | RRM 2 | ||||
3.4 | 746 | LOC_Os12g03710.1 | hnRNP_F/hnRNP_H | os-hnRNP-F/AtRNPH/F_2 | 12 | f | 1496364 | 1498413 | RRM 2 | ||||
3.4 | 869 | LOC_Os03g47800.1 | _ | hnRNP_G | 3 | r | 27127218 | 27131780 | RRM 1; CCHC 1 | ||||
3.5 | 107 | LOC_Os01g52390.1 | hnRNP-like_5 | osAth1 | 1 | r | 30094375 | 30097752 | HANP4_PAI-RBP! 1 | ||||
3.5 | 107 | LOC_Os05g51180.1 | hnRNP-like_5 | osAth2 | 5 | f | 29293328 | 29296564 | HANP4_PAI-RBP! 1 | ||||
3.5 | 137 | LOC_Os07g42380.1 | hnRNP-like_1 | osUBP1b-1 | 7 | f | 25356847 | 25361773 | RRM 3 | ||||
3.5 | 137 | LOC_Os11g40510.1 | hnRNP-like_1 | osUBP1b-2 | 11 | r | 23704511 | 23709491 | RRM 3 | ||||
3.5 | 137 | LOC_Os11g40510.2 | hnRNP-like_1 | osUBP1b-3 | 11 | r | 23704511 | 23709491 | RRM 3 | ||||
3.5 | 146 | LOC_Os03g37270.1 | hnRNP-like_3 | osRBP45a-1 | 8 | r | 34393689 | 34397955 | RRM 3 | ||||
3.5 | 146 | LOC_Os03g37270.2 | hnRNP-like_3 | osRBP45a-1 | 3 | r | 20653453 | 20659682 | RRM 3 | ||||
3.5 | 146 | LOC_Os08g09100.1 | hnRNP-like_3 | osRBP45a-2 | 8 | r | 5267013 | 5272174 | RRM 3 | ||||
3.5 | 410 | LOC_Os09g28810.1 | hnRNP-like_4 | osRBP47c | 9 | f | 17498162 | 17502055 | RRM 3 | ||||
3.5 | 636 | LOC_Os03g07800.1 | hnRNP-like_3 | osRBP45d | 3 | f | 3969212 | 3973528 | RRM 3 |
4. Novel spliceosome proteins
Group |
CIWOG |
Gene |
hHomologs |
SeHomologs |
Gene Name |
Chr |
str |
from |
to |
Txn |
Domains |
Transcripts |
|
4.1 | 148 | LOC_Os05g16660.1 | eIF3 | sub2 | os-eIF3sub2a-1 | 5 | f | 9448729 | 9454428 | WD40 4 | |||
4.1 | 148 | LOC_Os05g16660.2 | eIF3 | sub2 | os-eIF3sub2a-1 | 5 | f | 9448729 | 9454398 | WD40 4 | |||
4.1 | 148 | LOC_Os08g21660.1 | eIF3 | sub2 | os-eIF3sub2a-2 | 8 | r | 12904545 | 12911486 | WD40 4 | |||
4.1 | 206 | LOC_Os01g68810.1 | hTHO2 | osTHO2 | 1 | r | 39959242 | 39974874 | Tho2 | ||||
4.1 | 254 | LOC_Os02g52820.1 | KIAA0983 | osKIAA0983-1 | 2 | f | 32289451 | 32289451 | Fimp 1 | ||||
4.1 | 291 | LOC_Os07g07250.1 | eIF3_sub6 | os-eIF3sub6-1 | 7 | f | 3594697 | 3598708 | |||||
4.1 | 291 | LOC_Os07g12110.1 | eIF3_sub6 | os-eIF3sub6-2 | 7 | r | 6762485 | 6766334 | |||||
4.1 | 291 | LOC_Os07g32040.1 | eIF3_sub6 | os-eIF3sub6-3 | 7 | f | 19052636 | 19054962 | |||||
4.1 | 335 | LOC_Os03g63670.1 | C21orf66 | osC21orf66 | 3 | r | 35957730 | 35961273 | |||||
4.1 | 335 | LOC_Os03g63670.2 | C21orf66 | osC21orf66 | 3 | r | 35957734 | 35961273 | |||||
4.1 | 400 | LOC_Os03g01970.1 | hHPR1 | osHPR1 | 3 | f | 601459 | 608354 | |||||
4.1 | 483 | LOC_Os03g37330.1 | HsKin17 | Rts2p | osKin17-1 | 3 | r | 20689194 | 20691051 | ||||
4.1 | 541 | LOC_Os04g58640.1 | CF_I-25kD | osCFI-25kD-1 | 4 | r | 34692692 | 34696529 | |||||
4.1 | 976 | LOC_Os04g18010.1 | CPSF_160K | osCPSF-160k | 4 | r | 9879475 | 9906306 | |||||
4.1 | 1205 | LOC_Os08g30820.1 | CF_I-25kD | osCFI-25kD | 8 | r | 19028422 | 19030594 | |||||
4.2 | 32 | LOC_Os04g42600.1 | PAB1/PAB2 | osPABP1/osPAB1-1 | 4 | r | 25008886 | 25016133 | RRM 4 | ||||
4.2 | 32 | LOC_Os04g42600.2 | PAB1/PAB2 | osPABP1/osPAB1-1 | 4 | r | 25009651 | 25016133 | RRM 4 | ||||
4.2 | 32 | LOC_Os08g22354.1 | PAB1/PAB2 | osPABP1/osPAB1-2 | 8 | f | 13469297 | 13476757 | RRM 4 | ||||
4.2 | 32 | LOC_Os08g22354.2 | PAB1/PAB2 | osPABP1/osPAB1-2 | 8 | f | 13469297 | 13476757 | RRM 4 | ||||
4.2 | 32 | LOC_Os09g02700.1 | PAB1/PAB2 | osPABP1/osPAB1-3 | 9 | r | 1211856 | 1217011 | RRM 4 | ||||
4.2 | 468 | LOC_Os03g17030.1 | PAB1/PAB2 | osPABP6/osPAB7 | 3 | f | 9460077 | 9464449 | |||||
4.3 | 69 | LOC_Os01g07740.1 | p72 | p72-4/p72-3/p72-5 | 1 | r | 3712687 | 3717637 | DEAD 1; Helicase_C | ||||
4.3 | 69 | LOC_Os01g07740.2 | p72 | p72-4/p72-3/p72-5 | 1 | r | 3712702 | 3717631 | DEAD 1; Helicase_C | ||||
4.3 | 69 | LOC_Os01g07740.3 | p72 | p72-4/p72-3/p72-5 | 1 | r | 3712687 | 3717637 | DEAD 1; Helicase_C | ||||
4.3 | 69 | LOC_Os01g36860.1 | p72 | p72-4/p72-3/p72-5 | 1 | f | 20521402 | 20527198 | DEAD 1; Helicase_C | ||||
4.3 | 69 | LOC_Os01g36860.2 | p72 | p72-4/p72-3/p72-5 | 1 | f | 20522298 | 20527198 | DEAD 1; Helicase_C | ||||
4.3 | 69 | LOC_Os11g46240.1 | p72 | p72-4/p72-3/p72-5 | 11 | f | 27526751 | 27533537 | DEAD 1; Helicase_C | ||||
4.3 | 100 | LOC_Os01g10050.1 | p72 | p72-1 | 1 | r | 5246149 | 5250192 | DEAD 1; Helicase 1 | ||||
4.3 | 100 | LOC_Os01g10050.2 | p72 | p72-1 | 1 | r | 5245503 | 5250192 | DEAD 1; Helicase 1 | ||||
4.3 | 100 | LOC_Os01g68320.1 | p72 | p72-2 | 1 | r | 39687217 | 39692116 | DEAD 1; Helicase 1 | ||||
4.3 | 100 | LOC_Os01g68320.2 | p72 | p72-2 | 1 | r | 39687218 | 39692116 | DEAD 1; Helicase 1 | ||||
4.3 | 100 | LOC_Os01g68320.3 | p72 | p72-2 | 1 | r | 39687217 | 39692116 | DEAD 1; Helicase 1 | ||||
4.3 | 100 | LOC_Os01g68320.4 | p72 | p72-2 | 1 | r | 39687217 | 39692116 | DEAD 1; Helicase 1 | ||||
4.3 | 100 | LOC_Os01g68320.5 | p72 | p72-2 | 1 | r | 39687217 | 39692116 | DEAD 1; Helicase 1 | ||||
4.3 | 136 | LOC_Os11g07500.1 | KIAA0052 | osKIAA0052a-1 | 11 | r | 3797366 | 3804489 | DEAD 1; DSHCT 1; H | ||||
4.3 | 136 | LOC_Os11g07500.2 | KIAA0052 | osKIAA0052a-1 | 11 | r | 3797366 | 3804489 | DEAD 1; DSHCT 1; H | ||||
4.3 | 136 | LOC_Os12g18140.1 | KIAA0052 | osKIAA0052a-2 | 12 | f | 10456373 | 10463605 | DEAD 1; DSHCT 1; H | ||||
4.3 | 339 | LOC_Os03g06220.1 | hDbp5 | Dbp5p | osDbp5 | 3 | f | 3114962 | 3119763 | ||||
4.3 | 462 | LOC_Os02g05660.1 | Abstrakt | (Ded1p) | osAbstrakt-a1 | 2 | r | 2766215 | 2770019 | ||||
4.3 | 462 | LOC_Os06g48210.1 | Abstrakt | (Ded1p) | osAbstrakt-a2 | 6 | f | 29162791 | 29165836 | ||||
4.3 | 654 | LOC_Os01g11370.1 | DDX35 | osDDX35 | 1 | f | 6111801 | 6124531 | |||||
4.4 | 404 | LOC_Os08g44330.1 | KIAA0073 | osKIA0073 | 8 | f | 27890523 | 27896117 | |||||
4.4 | 404 | LOC_Os08g44330.2 | KIAA0073 | osKIA0073 | 8 | f | 27890630 | 27896117 | |||||
4.4 | 652 | LOC_Os06g04000.1 | PPIase-like_3 | osPPIL3 | 6 | f | 1634097 | 1635030 | |||||
4.4 | 745 | LOC_Os03g10400.2 | Cyp-60 | osCYP-60 | 3 | r | 5296334 | 5300353 | |||||
4.4 | 751 | LOC_Os01g40050.1 | SDCCAG10 | osSDCCAG10 | 1 | r | 22590389 | 22595120 | |||||
4.4 | 751 | LOC_Os01g40050.2 | SDCCAG10 | osSDCCAG10 | 1 | r | 22590305 | 22595120 | |||||
4.5 | 54 | LOC_Os02g39010.1 | CDCL2_p110 | osCDCL2p110-1 | 2 | f | 23556407 | 23560284 | Pkinase_Tyr 1; Pkin | ||||
4.5 | 54 | LOC_Os02g39010.2 | CDCL2_p110 | osCDCL2p110-1 | 2 | f | 23556407 | 23560284 | Pkinase_Tyr 1; Pkin | ||||
4.5 | 54 | LOC_Os02g39010.3 | CDCL2_p110 | osCDCL2p110-1 | 2 | f | 23556407 | 23560284 | Pkinase_Tyr 1; Pkin | ||||
4.5 | 54 | LOC_Os04g41100.1 | CDCL2_p110 | osCDCL2p110-1 | 4 | f | 24186653 | 24192932 | Pkinase_Tyr 1; Pkin | ||||
4.5 | 54 | LOC_Os04g41100.2 | CDCL2_p110 | osCDCL2p110-1 | 4 | f | 24186653 | 24192932 | Pkinase_Tyr 1; Pkin | ||||
4.5 | 54 | LOC_Os04g41100.3 | CDCL2_p110 | osCDCL2p110-1 | 4 | f | 24186653 | 24192932 | Pkinase_Tyr 1; Pkin | ||||
4.5 | 54 | LOC_Os04g41100.4 | CDCL2_p110 | osCDCL2p110-1 | 4 | f | 24186653 | 24192932 | Pkinase_Tyr 1; Pkin | ||||
4.5 | 54 | LOC_Os04g41100.5 | CDCL2_p110 | osCDCL2p110-1 | 4 | f | 24186653 | 24192932 | Pkinase_Tyr 1; Pkin | ||||
4.5 | 54 | LOC_Os04g41100.6 | CDCL2_p110 | osCDCL2p110-1 | 4 | f | 24186656 | 24192932 | Pkinase_Tyr 1; Pkin | ||||
4.5 | 70 | LOC_Os03g05830.1 | RNPC2 | osNPC2a/osNPC2b | 3 | r | 2921834 | 2930549 | RRM 2 | ||||
4.5 | 70 | LOC_Os10g30370.1 | RNPC2 | osNPC2a/osNPC2b | 10 | f | 15710850 | 15716786 | RRM 2 | ||||
4.5 | 70 | LOC_Os10g30370.2 | RNPC2 | osNPC2a/osNPC2b | 10 | f | 15709240 | 15716786 | RRM 2 | ||||
4.5 | 99 | LOC_Os03g25970.1 | IMP3 | osIMP3/KOC | 3 | r | 14870674 | 14875303 | KH 4 | ||||
4.5 | 99 | LOC_Os03g25970.2 | IMP3 | osIMP3/KOC | 3 | r | 14870674 | 14875303 | KH 4 | ||||
4.5 | 180 | LOC_Os02g07070.1 | RBM5 | osRBM5 | 2 | r | 3623605 | 3631548 | G-patch 1; RRM 2; | ||||
4.5 | 180 | LOC_Os02g07070.2 | RBM5 | osRBM5 | 2 | r | 3623647 | 3631548 | G-patch 1; RRM 2; | ||||
4.5 | 180 | LOC_Os02g07070.3 | RBM5 | osRBM5 | 2 | r | 3624825 | 3631548 | G-patch 1; RRM 2; | ||||
4.5 | 184 | LOC_Os03g06190.1 | PMSCL2 | osPMSCL2-1a | 3 | f | 3102830 | 3108799 | 3_5_exonuc 1; HRDC | ||||
4.5 | 184 | LOC_Os10g30100.1 | PMSCL2 | osPMSCL2-1b | 10 | r | 15566673 | 15573135 | 3_5_exonuc 1; HRDC | ||||
4.5 | 207 | LOC_Os02g49530.1 | DKFZP586O0120 | osDKFZP586O0120 | 2 | r | 30270471 | 30273458 | DUF1754 1 | ||||
4.5 | 207 | LOC_Os02g49530.2 | DKFZP586O0120 | osDKFZP586O0120 | 2 | r | 30270471 | 30273458 | DUF1754 1 | ||||
4.5 | 261 | LOC_Os01g49290.1 | RACK1 | Asc1p | osRACK1a | 1 | f | 28329756 | 28332348 | WD40 5 | |||
4.5 | 289 | LOC_Os03g26630.1 | AcinusL | osAcinusL | 3 | r | 15212860 | 15217717 | SAP 1 | ||||
4.5 | 289 | LOC_Os03g26630.2 | AcinusL | osAcinusL | 3 | r | 15212844 | 15217717 | SAP 1 | ||||
4.5 | 294 | LOC_Os01g21940.1 | hSmu-1/FLJ10805 | osSmu-1 | 1 | r | 12302144 | 12308409 | |||||
4.5 | 334 | LOC_Os01g62040.1 | TIP-49 | Rvb1p | osTIP49-1 | 1 | f | 35901917 | 35907283 | ||||
4.5 | 334 | LOC_Os01g62040.2 | TIP-49 | Rvb1p | osTIP49-1 | 1 | f | 35901929 | 35907283 | ||||
4.5 | 334 | LOC_Os07g08170.1 | TIP-49 | Rvb1p | osTIP49-2 | 7 | r | 4149688 | 4155067 | ||||
4.5 | 340 | LOC_Os02g41820.1 | UBL5p | Hub1p | osUBL5a-1 | 2 | r | 25141076 | 25143076 | ||||
4.5 | 340 | LOC_Os11g04880.1 | UBL5p | Hub1p | osUBL5a-2 | 11 | f | 2070410 | 2073046 | ||||
4.5 | 343 | LOC_Os11g05394.1 | KIAA1604 | osKIAA1604-1 | 11 | r | 2414381 | 2419267 | |||||
4.5 | 343 | LOC_Os12g15420.1 | KIAA1604 | osKIAA1604-1 | 11 | r | 2414381 | 2419269 | |||||
4.5 | 406 | LOC_Os10g34380.1 | CA150 | osCA150 | 10 | r | 18249679 | 18260338 | |||||
4.5 | 408 | LOC_Os06g30710.1 | DGSI_protein | osDGCR14 | 6 | f | 17811088 | 17815175 | |||||
4.5 | 408 | LOC_Os06g30710.2 | DGSI_protein | osDGCR14 | 6 | f | 17811061 | 17814617 | |||||
4.5 | 408 | LOC_Os06g30710.3 | DGSI_protein | osDGCR14 | 6 | f | 17811061 | 17815175 | |||||
4.5 | 465 | LOC_Os09g10930.1 | SF4/F23858 | osSF4 | 9 | f | 6015446 | 6019410 | |||||
4.5 | 465 | LOC_Os09g10930.2 | SF4/F23858 | osSF4 | 9 | f | 6015388 | 6019410 | |||||
4.5 | 473 | LOC_Os03g17170.1 | NOSIP | osNOSIP | 3 | f | 9552121 | 9554167 | |||||
4.5 | 476 | LOC_Os12g42140.1 | TFIP11/TIP39 | osTFIP11/TIP39a | 12 | r | 26090367 | 26093235 | |||||
4.5 | 484 | LOC_Os06g08770.1 | TIP-48 | osRuvB/TIP48a | 6 | r | 4387210 | 4390754 | |||||
4.5 | 544 | LOC_Os07g06450.1 | PUF60 | osCP33/PUF60like | 7 | r | 3121612 | 3123605 | |||||
4.5 | 552 | LOC_Os07g08729.1 | Ku70 | osKu70 | 7 | f | 4484207 | 4495252 | |||||
4.5 | 554 | LOC_Os02g19804.1 | ZNF183 | osZNF183a | 2 | f | 11578485 | 11583587 | |||||
4.5 | 556 | LOC_Os02g17870.1 | MFAP1 | osMFAP1a | 2 | r | 10351704 | 10354070 | |||||
4.5 | 633 | LOC_Os02g33860.1 | MGC4238 | osMORG1 | 2 | f | 20176345 | 20180268 | |||||
4.5 | 643 | LOC_Os07g32890.1 | PMSCL2 | osPMSCL2-3 | 7 | r | 19657126 | 19667113 | |||||
4.5 | 644 | LOC_Os11g04950.1 | PMSCL2 | osRED-1 | 11 | r | 2108008 | 2114673 | |||||
4.5 | 644 | LOC_Os12g04940.1 | PMSCL2 | osRED-2 | 12 | r | 2127574 | 2134180 | |||||
4.5 | 646 | LOC_Os06g30020.1 | FLJ90157/DKFZp434E22 | osPSP1 | 6 | f | 17271732 | 17279408 | |||||
4.5 | 649 | LOC_Os01g40610.1 | FLJ10374 | osCWF16-1 | 1 | f | 22930883 | 22936228 | |||||
4.5 | 651 | LOC_Os03g58590.1 | Cactin | osCactin | 3 | f | 33356856 | 33363499 | |||||
4.5 | 748 | LOC_Os01g46710.1 | KIAA0853 | osKIAA0853 | 1 | r | 26600860 | 26607432 | |||||
4.5 | 749 | LOC_Os03g04400.1 | FLJ10634 | osCAJ1/FLJ10634 | 3 | r | 2017672 | 2021076 | |||||
4.5 | 750 | LOC_Os06g29400.1 | FLJ10206 | osFLJ10206 | 6 | r | 16824603 | 16835212 | |||||
4.5 | 871 | LOC_Os08g08080.1 | MGC13125 | Cwc26p | osMGC13125-1 | 8 | f | 4585481 | 4590242 | ||||
4.5 | 871 | LOC_Os08g08080.2 | MGC13125 | Cwc26p | osMGC13125-2 | 8 | f | 4585486 | 4590236 | ||||
4.5 | 977 | LOC_Os03g15480.1 | SPF31 | osSPF31/Jiv | 3 | f | 8500302 | 8504614 |
5. Possible splicing related proteins
Group |
CIWOG |
Gene |
hHomologs |
SeHomologs |
Gene Name |
Chr |
str |
from |
to |
Txn |
Domains |
Transcripts |
|
5.1 | 106 | LOC_Os06g50890.1 | Splicing_factor_like | osSFL | 6 | f | 30778794 | 30783597 | RRM 1 | ||||
5.1 | 106 | LOC_Os06g50890.2 | Splicing_factor_like | osSFL | 6 | f | 30778794 | 30783597 | RRM 1 | ||||
5.1 | 106 | LOC_Os06g50890.4 | Splicing_factor_like | osSFL | 6 | f | 30778794 | 30783597 | RRM 1 | ||||
5.1 | 106 | LOC_Os06g50890.5 | Splicing_factor_like | osSFL | 6 | f | 30778794 | 30783597 | RRM 1 | ||||
5.1 | 205 | LOC_Os02g13130.1 | Splicing_factor_like | osSFL3 | 2 | f | 6979511 | 6985051 | KH_1 2 | ||||
5.1 | 205 | LOC_Os02g13130.2 | Splicing_factor_like | osSFL3 | 2 | f | 6979511 | 6985051 | KH_1 2 | ||||
5.1 | 205 | LOC_Os02g13130.3 | Splicing_factor_like | osSFL3 | 2 | f | 6979511 | 6985051 | KH_1 2 | ||||
5.1 | 224 | LOC_Os07g08190.1 | Splicing_factor_like | osSFL6a | 7 | f | 4174433 | 4180650 | Pro_isomerase 1 | ||||
5.1 | 542 | LOC_Os09g39780.1 | Splicing_factor_like | osSFL6b | 9 | f | 22809426 | 22810523 | |||||
5.1 | 542 | LOC_Os09g39780.2 | Splicing_factor_like | osSFL6b | 9 | f | 22809423 | 22810523 | |||||
5.1 | 547 | LOC_Os07g10390.1 | Splicing_factor_like | osSFL5 | 7 | r | 5566572 | 5575615 | |||||
5.1 | 641 | LOC_Os09g01630.1 | Splicing_factor_like | osSFL4 | 9 | r | 443788 | 450698 | |||||
5.1 | 641 | LOC_Os09g01630.2 | Splicing_factor_like | osSFL4 | 9 | r | 443788 | 450698 | |||||
5.2 | 121 | LOC_Os03g22730.1 | DNA_binding_protein_ | osDBP1a-1 | 3 | r | 13125169 | 13128611 | NOP5NT 1; NOSIC 1; | ||||
5.2 | 121 | LOC_Os03g22740.1 | DNA_binding_protein_ | osDBP1a-2 | 3 | r | 13132524 | 13135898 | NOP5NT 1; NOSIC 1; | ||||
5.2 | 333 | LOC_Os01g07070.1 | RNA_binding_2 | osRBD2b | 1 | f | 3321774 | 3326179 | |||||
5.2 | 333 | LOC_Os01g07070.2 | RNA_binding_2 | osRBD2b | 1 | f | 3321774 | 3326525 | |||||
5.2 | 333 | LOC_Os01g07070.3 | RNA_binding_2 | osRBD2b | 1 | f | 3321790 | 3327256 | |||||
5.2 | 333 | LOC_Os01g07070.4 | RNA_binding_2 | osRBD2b | 1 | f | 3321774 | 3326525 | |||||
5.2 | 338 | LOC_Os05g51480.1 | DNA_binding_protein_ | osDBP2a | 5 | f | 29449210 | 29457409 | |||||
5.2 | 338 | LOC_Os05g51480.2 | DNA_binding_protein_ | osDBP2a | 5 | f | 29449210 | 29457407 | |||||
5.2 | 341 | LOC_Os07g12490.1 | RNA_binding_1 | osRBD1b | 7 | f | 7119724 | 7125463 | |||||
5.2 | 401 | LOC_Os09g39180.1 | Chloroplast | RNA_Binding_31 | osCP31a | 9 | r | 22504522 | 22507074 | ||||
5.2 | 1204 | LOC_Os04g33810.1 | Similar_to_RNA_bindi | osRBD5 | 4 | f | 20312202 | 20313764 | |||||
5.3 | 258 | LOC_Os02g53230.1 | SPT5 | osSPT5a-1 | 2 | f | 32578698 | 32585503 | KOW 1; Supt5 2 | ||||
5.3 | 258 | LOC_Os06g10620.1 | SPT5 | osSPT5a-2 | 6 | r | 5522781 | 5527577 | KOW 1; Supt5 2 | ||||
5.3 | 295 | LOC_Os03g36780.1 | Elongation_Factor(M) | osEFMa | 3 | f | 20401513 | 20416037 | |||||
5.3 | 477 | LOC_Os01g66300.1 | Elongation_Factor | osEF2-1 | 1 | f | 38508080 | 38512573 | |||||
5.3 | 477 | LOC_Os05g34670.1 | Elongation_Factor | osEF2-2 | 5 | r | 20506360 | 20511108 | |||||
5.3 | 759 | LOC_Os04g45490.1 | Elongation_Factor | osEF1 | 4 | r | 26732755 | 26735520 | |||||
5.4 | 1096 | LOC_Os01g14990.1 | Glycine_Rich_Protein | osGRPs-4 | 1 | r | 8400311 | 8401406 |