1.6 Tri-snRNP specific proteins (U4/U6.U5)
Species |
CIWOG |
Gene |
hHomologs |
SeHomologs |
Gene Name |
Barta Name |
Chr |
str |
from |
to |
Txn |
Domains |
Transcripts |
|
| At | 399 | AT5G16780.1 | Tri-110KD | SAD1 | atTri110 | 5 | r | 5517490 | 5522258 | SART-1 1 | ||||
| At | 633 | AT5G57370.1 | (U4/U6.U5) | Tri-27kD/RY1 | atTri-27kD/RY1 | 5 | f | 23244734 | 23246420 | |||||
| At | 638 | AT4G22350.1 | Tri-65_KD | Snu66p | atTri65a | 4 | r | 11803834 | 11807178 | UCH 1; ZnF_UBP 1 | ||||
| At | 753 | AT3G05760.1 | hSnu23/FLJ31121 | Snu23p | atSnu23 | 3 | f | 1707900 | 1710038 | ZnF_U1 1 | ||||
| Gm | 399 | Glyma07g34600.1 | Tri-110KD | SAD1 | gmTri110-1 | 7 | f | 39615018 | 39634268 | SART-1 1 | ||||
| Gm | 399 | Glyma08g24660.1 | Tri-110KD | SAD1 | gmTri110-2 | 8 | r | 18821100 | 18836039 | SART-1 1 | ||||
| Gm | 399 | Glyma15g29960.1 | Tri-110KD | SAD1 | gmTri110-3 | 15 | r | 32980048 | 32987556 | SART-1 1 | ||||
| Gm | 399 | Glyma15g29960.2 | Tri-110KD | SAD1 | gmTri110-3 | 15 | r | 32978079 | 32982118 | SART-1 1 | ||||
| Gm | 634 | Glyma13g00900.1 | (U4/U6.U5) | Tri-27kD/RY1 | gmTri-27kD/RY1-1 | 13 | f | 621448 | 624361 | |||||
| Gm | 634 | Glyma17g06990.1 | (U4/U6.U5) | Tri-27kD/RY1 | gmTri-27kD/RY1-2 | 17 | f | 5049873 | 5052898 | |||||
| Gm | 638 | Glyma10g08500.1 | Tri-65_KD | Snu66p | gmTri65a-1 | 10 | f | 7359941 | 7365431 | UCH 1; ZnF_UBP 1 | ||||
| Gm | 638 | Glyma10g08500.2 | Tri-65_KD | Snu66p | gmTri65a-1 | 10 | f | 7359941 | 7365436 | UCH 1; ZnF_UBP 1 | ||||
| Gm | 638 | Glyma13g22190.1 | Tri-65_KD | Snu66p | gmTri65a-2 | 13 | f | 25771387 | 25778748 | UCH 1; ZnF_UBP 1 | ||||
| Gm | 753 | Glyma03g39120.1 | hSnu23/FLJ31121 | Snu23p | gmSnu23-1 | 3 | r | 45319110 | 45324034 | ZnF_U1 1 | ||||
| Gm | 753 | Glyma03g39120.2 | hSnu23/FLJ31121 | Snu23p | gmSnu23-1 | 3 | r | 45319110 | 45323921 | ZnF_U1 1 | ||||
| Gm | 753 | Glyma19g41680.1 | hSnu23/FLJ31121 | Snu23p | gmSnu23-2 | 19 | r | 47892503 | 47895819 | ZnF_U1 1 | ||||
| Lj | 399 | LjSGA_024791.1 | Tri-110KD | SAD1 | ljTri110-1 | SART-1 1 | ||||||||
| Lj | 399 | LjSGA_035379.1 | Tri-110KD | SAD1 | ljTri110-2 | SART-1 1 | ||||||||
| Lj | 634 | LjSGA_146737.1 | (U4/U6.U5) | Tri-27kD/RY1 | ljTri-27kD/RY1 | |||||||||
| Lj | 638 | chr2.CM0249.1090.nc | Tri-65_KD | Snu66p | ljTri65a | 2 | r | 53311584 | 53315817 | UCH 1; ZnF_UBP 1 | ||||
| Lj | 753 | chr1.CM0206.120.nd | hSnu23/FLJ31121 | Snu23p | ljSnu23 | 1 | f | 79791270 | 79794370 | ZnF_U1 1 | ||||
| Os | 399 | LOC_Os02g30730.1 | Tri-110KD | SAD1 | osTri110 | 2 | r | 18305661 | 18311428 | SART-1 1 | ||||
| Os | 399 | LOC_Os02g30730.2 | Tri-110KD | SAD1 | osTri110 | 2 | r | 18305663 | 18311428 | SART-1 1 | ||||
| Os | 634 | LOC_Os02g26349.1 | (U4/U6.U5) | Tri-27kD/RY1 | osTri-27kD/RY1 | 2 | r | 15462135 | 15471529 | |||||
| Os | 634 | LOC_Os02g26349.2 | (U4/U6.U5) | Tri-27kD/RY1 | osTri-27kD/RY1 | 2 | r | 15462135 | 15471529 | |||||
| Os | 638 | LOC_Os09g24250.1 | Tri-65_KD | Snu66p | osTri65a | 9 | r | 14393486 | 14398473 | UCH 1; ZnF_UBP 1 | ||||
| Os | 753 | LOC_Os03g61640.1 | hSnu23/FLJ31121 | Snu23p | osSnu23 | 3 | f | 34934472 | 34937525 | ZnF_U1 1 | ||||
| Pp | 399 | estExt_fgenesh2_pg.C_990065 | Tri-110KD | SAD1 | ppTri110 | 99 | f | 1249896 | 1256253 | SART-1 1 | ||||
| Pp | 634 | estExt_fgenesh1_pg.C_870028 | (U4/U6.U5) | Tri-27kD/RY1 | ppTri-27kD/RY1 | 87 | r | 386165 | 388147 | |||||
| Pp | 638 | gw1.7.83.1 | Tri-65_KD | Snu66p | ppTri65a | 7 | r | 230987 | 234731 | UCH 1; ZnF_UBP 1 | ||||
| Pp | 753 | estExt_gwp_gw1.C_2010100 | hSnu23/FLJ31121 | Snu23p | ppSnu23 | 201 | f | 457076 | 457687 | ZnF_U1 1 | ||||
| Pt | 399 | jgi|Poptr1_1|413030|gw1.III.133.1 | Tri-110KD | SAD1 | ptTri110-1 | 3 | r | 13550664 | 13556473 | SART-1 1 | ||||
| Pt | 399 | jgi|Poptr1_1|640254|grail3.0008027801 | Tri-110KD | SAD1 | ptTri110-2 | 1 | f | 5955911 | 5958963 | SART-1 1 | ||||
| Pt | 634 | jgi|Poptr1_1|578585|eugene3.00180809 | (U4/U6.U5) | Tri-27kD/RY1 | ptTri-27kD/RY1 | 18 | f | 9407688 | 9408275 | |||||
| Pt | 638 | jgi|Poptr1_1|254809|gw1.XVI.748.1 | Tri-65_KD | Snu66p | ptTri65a-1 | 16 | f | 676642 | 680102 | UCH 1; ZnF_UBP 1 | ||||
| Pt | 638 | jgi|Poptr1_1|560149|eugene3.00060108 | Tri-65_KD | Snu66p | ptTri65a-2 | 6 | r | 641302 | 645196 | UCH 1; ZnF_UBP 1 | ||||
| Pt | 753 | jgi|Poptr1_1|729449|estExt_Genewise1_v1.C_LG_XIII0652 | hSnu23/FLJ31121 | Snu23p | ptSnu23 | ZnF_U1 1 | ||||||||
| Sb | 399 | Sb02g040460.1 | Tri-110KD | SAD1 | sbTri110 | 2 | r | 74386506 | 74389007 | SART-1 1 | ||||
| Sb | 634 | Sb02g039630.1 | (U4/U6.U5) | Tri-27kD/RY1 | sbTri-27kD/RY1 | 2 | r | 73684503 | 73685148 | |||||
| Sb | 638 | Sb10g027800.1 | Tri-65_KD | Snu66p | sbTri65a | 10 | f | 57664857 | 57669791 | UCH 1; ZnF_UBP 1 | ||||
| Sb | 753 | Sb03g003400.1 | hSnu23/FLJ31121 | Snu23p | sbSnu23 | 3 | f | 3620918 | 3623916 | ZnF_U1 1 | ||||
| Vv | 399 | GSVIVT00007133001 | Tri-110KD | SAD1 | vvTri110 | 0 | f | 45264113 | 45283528 | SART-1 1 | ||||
| Vv | 633 | GSVIVT00031353001 | (U4/U6.U5) | Tri-27kD/RY1 | vvTri-27kD/RY1 | 11 | f | 12522357 | 12522965 | |||||
| Vv | 638 | GSVIVT00010886001 | Tri-65_KD | Snu66p | vvTri65a | 0 | f | 67861535 | 67867373 | UCH 1; ZnF_UBP 1 | ||||
| Vv | 753 | GSVIVT00022628001 | hSnu23/FLJ31121 | Snu23p | vvSnu23 | 3 | r | 45319110 | 45324034 | ZnF_U1 1 | ||||
| Zm | 399 | GRMZM2G109284_T01 | Tri-110KD | SAD1 | zmTri110 | 3 | r | 143934248 | 143941600 | SART-1 1 | ||||
| Zm | 633 | GRMZM2G097593_T01 | (U4/U6.U5) | Tri-27kD/RY1 | zmTri-27kD/RY1 | 7 | f | 160546021 | 160555984 | |||||
| Zm | 633 | GRMZM2G097593_T02 | (U4/U6.U5) | Tri-27kD/RY1 | zmTri-27kD/RY1 | 7 | f | 160546021 | 160555422 | |||||
| Zm | 638 | GRMZM2G091151_T01 | Tri-65_KD | Snu66p | zmTri65a | 5 | f | 48821841 | 48826206 | UCH 1; ZnF_UBP 1 | ||||
| Zm | 753 | GRMZM2G051458_T01 | hSnu23/FLJ31121 | Snu23p | zmSnu23 | 3 | r | 8344676 | 8348540 | ZnF_U1 1 |