1.2 U1 snRNP specific proteins
Species |
CIWOG |
Gene |
hHomologs |
SeHomologs |
Gene Name |
Barta Name |
Chr |
str |
from |
to |
Txn |
Domains |
Transcripts |
|
| At | 92 | AT3G03340.1 | Luc7 | atLuc7a | 3 | f | 786320 | 790077 | DUF259 1 | |||||
| At | 92 | AT5G17440.1 | Luc7 | atLuc7b | 5 | f | 5749762 | 5753643 | DUF259 1 | |||||
| At | 208 | AT1G04080.1 | Prp39 | atPrp39a | 1 | f | 1051343 | 1056751 | HAT 7; TPR-like 1 | |||||
| At | 403 | AT3G50670.1 | U1-70K | Snp1 | atU1-70K | 3 | r | 18826300 | 18829618 | RRM 1 | ||||
| At | 463 | AT4G03120.1 | U1C_Subunit | Yhc1 | atU1C | 4 | f | 1385660 | 1387739 | C2H2 1; mrCtermi 3 | ||||
| At | 475 | AT1G44910.1 | FBP11 | Prp40 | atPrp40a | 1 | f | 16975604 | 16982965 | WW 2; FF 5 | ||||
| At | 538 | AT5G51410.1 | Related_to_Luc7-like | Luc7 | atLuc7-rl | 5 | r | 20881367 | 20883704 | DUF259 1 | ||||
| At | 981 | AT2G47580.1 | U1A_Subunit | Mud1 | atU1A | 2 | f | 19517187 | 19518871 | RRM 2 | ||||
| At | 1097 | AT5G46400.1 | Prp39 | atPrp39b | 5 | f | 18820032 | 18824650 | HAT 4 | |||||
| Gm | 92 | Glyma09g38430.1 | Luc7 | gmLuc7a | 9 | f | 43797271 | 43803422 | DUF259 1 | |||||
| Gm | 92 | Glyma18g47910.1 | Luc7 | gmLuc7b | 18 | r | 57447619 | 57453060 | DUF259 1 | |||||
| Gm | 208 | Glyma03g32410.1 | Prp39 | gmPrp39a-1 | 3 | f | 40153529 | 40163823 | HAT 7; TPR-like 1 | |||||
| Gm | 208 | Glyma19g35140.1 | Prp39 | gmPrp39a-2 | 19 | f | 42693678 | 42703477 | HAT 7; TPR-like 1 | |||||
| Gm | 208 | Glyma19g35140.2 | Prp39 | gmPrp39a-2 | 19 | f | 42696399 | 42703446 | HAT 7; TPR-like 1 | |||||
| Gm | 208 | Glyma19g35140.3 | Prp39 | gmPrp39a-2 | 19 | f | 42696923 | 42703446 | HAT 7; TPR-like 1 | |||||
| Gm | 403 | Glyma01g38120.1 | U1-70K | Snp1 | gmU1-70K-1 | 1 | f | 50277071 | 50282016 | RRM 1 | ||||
| Gm | 403 | Glyma11g07200.1 | U1-70K | Snp1 | gmU1-70K-2 | 11 | f | 5028704 | 5034147 | RRM 1 | ||||
| Gm | 403 | Glyma11g07200.2 | U1-70K | Snp1 | gmU1-70K-2 | 11 | f | 5028704 | 5034147 | RRM 1 | ||||
| Gm | 463 | Glyma02g17120.1 | U1C_Subunit | Yhc1 | gmU1C-1 | 2 | f | 15435538 | 15438473 | C2H2 1; mrCtermi 3 | ||||
| Gm | 463 | Glyma02g17120.2 | U1C_Subunit | Yhc1 | gmU1C-1 | 2 | f | 15435528 | 15438473 | C2H2 1; mrCtermi 3 | ||||
| Gm | 463 | Glyma10g02680.1 | U1C_Subunit | Yhc1 | gmU1C-2 | 10 | r | 1906274 | 1910779 | C2H2 1; mrCtermi 3 | ||||
| Gm | 475 | Glyma14g10070.2 | FBP11 | Prp40 | gmPrp40a-1 | 14 | r | 8140673 | 8149005 | WW 2; FF 5 | ||||
| Gm | 475 | Glyma17g35120.1 | FBP11 | Prp40 | gmPrp40a-2 | 17 | f | 39114255 | 39128614 | WW 2; FF 5 | ||||
| Gm | 538 | Glyma09g35800.1 | Related_to_Luc7-like | Luc7 | gmLuc7-rl-1 | 9 | r | 41709461 | 41712601 | DUF259 1 | ||||
| Gm | 538 | Glyma09g35800.2 | Related_to_Luc7-like | Luc7 | gmLuc7-rl-1 | 9 | r | 41709461 | 41712601 | DUF259 1 | ||||
| Gm | 538 | Glyma12g01550.1 | Related_to_Luc7-like | Luc7 | gmLuc7-rl-2 | 12 | f | 923556 | 926259 | DUF259 1 | ||||
| Gm | 981 | Glyma03g41400.1 | U1A_Subunit | Mud1 | gmU1A-1 | 3 | f | 46890750 | 46893552 | RRM 2 | ||||
| Gm | 981 | Glyma19g43990.1 | U1A_Subunit | Mud1 | gmU1A-2 | 19 | f | 49554316 | 49557826 | RRM 2 | ||||
| Gm | 981 | Glyma19g43990.2 | U1A_Subunit | Mud1 | gmU1A-2 | 19 | f | 49554316 | 49557826 | RRM 2 | ||||
| Gm | 1097 | Glyma08g12860.1 | Prp39 | gmPrp39b | 8 | f | 9405314 | 9416952 | HAT 4 | |||||
| Lj | 92 | LjT30N18.130.nd | Luc7 | ljLuc7 | DUF259 1 | |||||||||
| Lj | 208 | LjSGA_023088.1 | Prp39 | ljPrp39a-1 | HAT 7; TPR-like 1 | |||||||||
| Lj | 208 | LjSGA_083272.1 | Prp39 | ljPrp39a-2 | HAT 7; TPR-like 1 | |||||||||
| Lj | 403 | chr4.CM0165.550.nd | U1-70K | Snp1 | ljU1-70K | 4 | r | 18375306 | 18380565 | RRM 1 | ||||
| Lj | 463 | LjSGA_022586.1 | U1C_Subunit | Yhc1 | ljU1C | C2H2 1; mrCtermi 3 | ||||||||
| Lj | 538 | chr3.CM0127.780.nd | Related_to_Luc7-like | Luc7 | ljLuc7-rl | 3 | r | 87738242 | 87740865 | DUF259 1 | ||||
| Lj | 1097 | LjSGA_039796.1 | Prp39 | ljPrp39b | HAT 4 | |||||||||
| Mt | 92 | IMGA|AC186678_23.2 | Luc7 | mtLuc7a | 7 | f | 17379774 | 17385759 | DUF259 1 | |||||
| Mt | 208 | IMGA|AC147517_33.2 | Prp39 | mtPrp39a-1 | 7 | r | 27005506 | 27014213 | HAT 7; TPR-like 1 | |||||
| Mt | 208 | IMGA|AC148607_56.2 | Prp39 | mtPrp39a-2 | 7 | r | 26944705 | 26953411 | HAT 7; TPR-like 1 | |||||
| Mt | 403 | IMGA|AC148484_33.2 | U1-70K | Snp1 | mtU1-70K | 8 | f | 19709444 | 19714984 | RRM 1 | ||||
| Mt | 1097 | IMGA|AC144608_48.2 | Prp39 | mtPrp39b | HAT 4 | |||||||||
| Os | 92 | LOC_Os02g39300.1 | Luc7 | osLuc7a | 2 | f | 23723380 | 23728528 | DUF259 1 | |||||
| Os | 92 | LOC_Os03g62640.2 | Luc7 | osLuc7b | 3 | r | 35439310 | 35445340 | DUF259 1 | |||||
| Os | 92 | LOC_Os03g62640.3 | Luc7 | osLuc7b | 3 | r | 35439307 | 3544534 | DUF259 1 | |||||
| Os | 92 | LOC_Os03g62640.4 | Luc7 | osLuc7b | 3 | r | 35439307 | 3544534 | DUF259 1 | |||||
| Os | 208 | LOC_Os03g11200.1 | Prp39 | osPrp39a | 3 | r | 5759804 | 5766440 | HAT 7; TPR-like 1 | |||||
| Os | 403 | LOC_Os10g02630.1 | U1-70K | Snp1 | osU1-70K | 10 | r | 1006562 | 1011920 | RRM 1 | ||||
| Os | 463 | LOC_Os02g16640.1 | U1C_Subunit | Yhc1 | osU1C | 2 | r | 9505790 | 9509900 | C2H2 1; mrCtermi 3 | ||||
| Os | 475 | LOC_Os01g34780.1 | FBP11 | Prp40 | osPrp40a | 1 | r | 19176691 | 19184701 | WW 2; FF 5 | ||||
| Os | 475 | LOC_Os01g34780.2 | FBP11 | Prp40 | osPrp40a | 1 | r | 19176692 | 19184701 | WW 2; FF 5 | ||||
| Os | 538 | LOC_Os07g27300.1 | Related_to_Luc7-like | Luc7 | osLuc7-rl | 7 | r | 15867936 | 15873107 | DUF259 1 | ||||
| Os | 538 | LOC_Os07g27300.2 | Related_to_Luc7-like | Luc7 | osLuc7-rl | 7 | r | 15868787 | 15873107 | DUF259 1 | ||||
| Os | 1097 | LOC_Os08g29124.1 | Prp39 | osPrp39b | 8 | r | 17819654 | 17835422 | HAT 4 | |||||
| Pp | 92 | e_gw1.88.197.1 | Luc7 | ppLuc7a | 88 | f | 201511 | 205155 | DUF259 1 | |||||
| Pp | 92 | e_gw1.402.25.1 | Luc7 | ppLuc7b | 402 | f | 249094 | 254156 | DUF259 1 | |||||
| Pp | 208 | e_gw1.30.35.1 | Prp39 | ppPrp39a-1 | 30 | r | 1290890 | 1295673 | HAT 7; TPR-like 1 | |||||
| Pp | 208 | e_gw1.164.9.1 | Prp39 | ppPrp39a-2 | 164 | r | 78638 | 83221 | HAT 7; TPR-like 1 | |||||
| Pp | 208 | estExt_Genewise1.C_590198 | Prp39 | ppPrp39a-3 | 59 | r | 1253771 | 1259456 | HAT 7; TPR-like 1 | |||||
| Pp | 403 | e_gw1.42.134.1 | U1-70K | Snp1 | ppU1-70K-1 | 42 | f | 2162695 | 2165062 | RRM 1 | ||||
| Pp | 403 | e_gw1.332.23.1 | U1-70K | Snp1 | ppU1-70K-2 | 332 | r | 267376 | 269534 | RRM 1 | ||||
| Pp | 463 | estExt_fgenesh1_pg.C_1550066 | U1C_Subunit | Yhc1 | ppU1C-1 | 155 | f | 925114 | 929005 | C2H2 1; mrCtermi 3 | ||||
| Pp | 463 | fgenesh1_pg.scaffold_267000046 | U1C_Subunit | Yhc1 | ppU1C-2 | 267 | r | 563816 | 566347 | C2H2 1; mrCtermi 3 | ||||
| Pp | 475 | estExt_fgenesh1_pg.C_1740055 | FBP11 | Prp40 | ppPrp40a | 174 | f | 642693 | 653028 | WW 2; FF 5 | ||||
| Pp | 538 | e_gw1.22.82.1 | Related_to_Luc7-like | Luc7 | ppLuc7-rl | 22 | r | 1345379 | 1349634 | DUF259 1 | ||||
| Pt | 92 | jgi|Poptr1_1|249129|gw1.XIX.1529.1 | Luc7 | ptLuc7a | 19 | r | 7358598 | 7362127 | DUF259 1 | |||||
| Pt | 92 | jgi|Poptr1_1|742740|estExt_Genewise1_v1.C_870092 | Luc7 | ptLuc7b | 87 | f | 554234 | 557822 | DUF259 1 | |||||
| Pt | 208 | jgi|Poptr1_1|730568|estExt_Genewise1_v1.C_LG_XIV0085 | Prp39 | ptPrp39a-1 | 14 | f | 12650756 | 12657227 | HAT 7; TPR-like 1 | |||||
| Pt | 208 | jgi|Poptr1_1|816978|estExt_fgenesh4_pg.C_LG_II2553 | Prp39 | ptPrp39a-2 | 2 | r | 23762748 | 23771899 | HAT 7; TPR-like 1 | |||||
| Pt | 403 | jgi|Poptr1_1|219158|gw1.VII.3463.1 | U1-70K | Snp1 | ptU1-70K | 7 | f | 10625068 | 10626477 | RRM 1 | ||||
| Pt | 463 | jgi|Poptr1_1|712203|estExt_Genewise1_v1.C_LG_III1414 | U1C_Subunit | Yhc1 | ptU1C | 3 | r | 4483108 | 4484444 | C2H2 1; mrCtermi 3 | ||||
| Pt | 475 | jgi|Poptr1_1|572009|eugene3.00140054 | FBP11 | Prp40 | ptPrp40a-1 | 14 | f | 429028 | 442109 | WW 2; FF 5 | ||||
| Pt | 475 | jgi|Poptr1_1|767717|fgenesh4_pg.C_LG_IX000768 | FBP11 | Prp40 | ptPrp40a-2 | 9 | r | 4902986 | 4908345 | WW 2; FF 5 | ||||
| Pt | 475 | jgi|Poptr1_1|829855|estExt_fgenesh4_pm.C_LG_I1075 | FBP11 | Prp40 | ptPrp40a-3 | 1 | r | 27492319 | 27503272 | WW 2; FF 5 | ||||
| Pt | 538 | jgi|Poptr1_1|817271|estExt_fgenesh4_pg.C_LG_III0864 | Related_to_Luc7-like | Luc7 | ptLuc7-rl-1 | 3 | r | 10491966 | 10494228 | DUF259 1 | ||||
| Pt | 538 | jgi|Poptr1_1|836384|estExt_fgenesh4_pm.C_290170 | Related_to_Luc7-like | Luc7 | ptLuc7-rl-2 | 29 | r | 3497564 | 3499906 | DUF259 1 | ||||
| Pt | 981 | jgi|Poptr1_1|807512|fgenesh4_pm.C_LG_XIV000322 | U1A_Subunit | Mud1 | ptU1A-1 | 14 | f | 5698111 | 5701179 | RRM 2 | ||||
| Pt | 981 | jgi|Poptr1_1|816688|estExt_fgenesh4_pg.C_LG_II1730 | U1A_Subunit | Mud1 | ptU1A-2 | 2 | r | 15165534 | 15168709 | RRM 2 | ||||
| Sb | 92 | Sb01g001640.1 | Luc7 | sbc7a | 1 | f | 1475109 | 1480625 | DUF259 1 | |||||
| Sb | 92 | Sb04g025450.1 | Luc7 | sbc7b | 4 | r | 55185906 | 55190950 | DUF259 1 | |||||
| Sb | 208 | Sb01g043300.1 | Prp39 | sbPrp39a | 1 | f | 66519441 | 66527462 | HAT 7; TPR-like 1 | |||||
| Sb | 403 | Sb01g039540.1 | U1-70K | Snp1 | sbU1-70K | 1 | r | 62939704 | 62944925 | RRM 1 | ||||
| Sb | 463 | Sb04g009880.1 | U1C_Subunit | Yhc1 | sbU1C-1 | 4 | r | 12581088 | 12584390 | C2H2 1; mrCtermi 3 | ||||
| Sb | 463 | Sb04g028260.1 | U1C_Subunit | Yhc1 | sbU1C-2 | 4 | f | 58344204 | 58347428 | C2H2 1; mrCtermi 3 | ||||
| Sb | 475 | Sb03g023440.2 | FBP11 | Prp40 | sbPrp40a | 3 | r | 46624051 | 46646447 | WW 2; FF 5 | ||||
| Sb | 538 | Sb02g010960.1 | Related_to_Luc7-like | Luc7 | sbLuc7-rl | 2 | r | 17544103 | 17547377 | DUF259 1 | ||||
| Sb | 981 | Sb09g004270.1 | U1A_Subunit | Mud1 | sbU1A | 9 | f | 5060151 | 5063515 | RRM 2 | ||||
| Sb | 1097 | Sb07g019230.1 | Prp39 | sbPrp39b | 7 | r | 49150386 | 49160602 | HAT 4 | |||||
| Vv | 92 | GSVIVT00025042001 | Luc7 | vvLuc7 | 4 | r | 12034976 | 12045039 | DUF259 1 | |||||
| Vv | 208 | GSVIVT00028510001 | Prp39 | vvPrp39a | 7 | f | 7797619 | 7816149 | HAT 7; TPR-like 1 | |||||
| Vv | 403 | GSVIVT00024956001 | U1-70K | Snp1 | vvU1-70K | 4 | f | 12949347 | 12959171 | RRM 1 | ||||
| Vv | 475 | GSVIVT00014992001 | FBP11 | Prp40 | vvPrp40a | 18 | f | 7016256 | 7052875 | WW 2; FF 5 | ||||
| Vv | 538 | GSVIVT00029930001 | Related_to_Luc7-like | Luc7 | vvLuc7-rl | 0 | r | 115024336 | 115033537 | DUF259 1 | ||||
| Vv | 981 | GSVIVT00028024001 | U1A_Subunit | Mud1 | vvU1A | 7 | r | 3675740 | 3680305 | RRM 2 | ||||
| Vv | 1097 | GSVIVT00003390001 | Prp39 | vvPrp39b | 0 | r | 23119159 | 23178082 | HAT 4 | |||||
| Zm | 92 | GRMZM2G028096_T02 | Luc7 | zmLuc7a | 5 | r | 181751942 | 181758352 | DUF259 1 | |||||
| Zm | 92 | GRMZM2G028096_T04 | Luc7 | zmLuc7a | 5 | r | 181751976 | 181758352 | DUF259 1 | |||||
| Zm | 92 | GRMZM2G069916_T01 | Luc7 | zmLuc7b | 5 | f | 1318949 | 1326711 | DUF259 1 | |||||
| Zm | 92 | GRMZM2G069916_T02 | Luc7 | zmLuc7b | 5 | f | 1318949 | 1326711 | DUF259 1 | |||||
| Zm | 92 | GRMZM2G069916_T03 | Luc7 | zmLuc7b | 5 | f | 1318949 | 1326711 | DUF259 1 | |||||
| Zm | 92 | GRMZM2G069916_T04 | Luc7 | zmLuc7b | 5 | f | 1319034 | 1326711 | DUF259 1 | |||||
| Zm | 92 | GRMZM2G069916_T05 | Luc7 | zmLuc7b | 5 | f | 1318949 | 1326700 | DUF259 1 | |||||
| Zm | 92 | GRMZM2G118014_T01 | Luc7 | zmLuc7c | 1 | r | 295928049 | 295934046 | DUF259 1 | |||||
| Zm | 92 | GRMZM2G118014_T02 | Luc7 | zmLuc7c | 1 | r | 295928054 | 295934046 | DUF259 1 | |||||
| Zm | 92 | GRMZM2G118014_T04 | Luc7 | zmLuc7c | 1 | r | 295928267 | 295934046 | DUF259 1 | |||||
| Zm | 92 | GRMZM2G118014_T05 | Luc7 | zmLuc7c | 1 | r | 295928267 | 295934046 | DUF259 1 | |||||
| Zm | 208 | GRMZM2G178294_T01 | Prp39 | zmPrp39a | 9 | f | 143027379 | 143037967 | HAT 7; TPR-like 1 | |||||
| Zm | 208 | GRMZM2G178294_T02 | Prp39 | zmPrp39a | 9 | f | 143027379 | 143037967 | HAT 7; TPR-like 1 | |||||
| Zm | 208 | GRMZM2G178294_T04 | Prp39 | zmPrp39a | 9 | f | 143027379 | 143036608 | HAT 7; TPR-like 1 | |||||
| Zm | 403 | GRMZM2G113592_T01 | U1-70K | Snp1 | zmU1-70K | 5 | r | 40079055 | 40084203 | RRM 1 | ||||
| Zm | 403 | GRMZM2G113592_T02 | U1-70K | Snp1 | zmU1-70K | 5 | r | 40079071 | 40084256 | RRM 1 | ||||
| Zm | 403 | GRMZM2G113592_T03 | U1-70K | Snp1 | zmU1-70K | 5 | r | 40081012 | 40084203 | RRM 1 | ||||
| Zm | 463 | GRMZM2G413193_T01 | U1C_Subunit | Yhc1 | zmU1C | 4 | r | 229513297 | 229518360 | C2H2 1; mrCtermi 3 | ||||
| Zm | 463 | GRMZM2G413193_T02 | U1C_Subunit | Yhc1 | zmU1C | 4 | r | 229513498 | 229518360 | C2H2 1; mrCtermi 3 | ||||
| Zm | 463 | GRMZM2G413193_T03 | U1C_Subunit | Yhc1 | zmU1C | 4 | r | 229514770 | 229518360 | C2H2 1; mrCtermi 3 | ||||
| Zm | 475 | GRMZM2G075767_T01 | FBP11 | Prp40 | zmPrp40a | 3 | f | 226499645 | 226526192 | WW 2; FF 5 | ||||
| Zm | 475 | GRMZM2G075767_T02 | FBP11 | Prp40 | zmPrp40a | 3 | f | 226499645 | 226524499 | WW 2; FF 5 | ||||
| Zm | 475 | GRMZM2G075767_T03 | FBP11 | Prp40 | zmPrp40a | 3 | f | 226499645 | 226512800 | WW 2; FF 5 | ||||
| Zm | 538 | GRMZM2G177842_T01 | Related_to_Luc7-like | Luc7 | zmLuc7-rl | 7 | r | 44937258 | 44940539 | DUF259 1 | ||||
| Zm | 981 | GRMZM2G018020_T01 | U1A_Subunit | Mud1 | zmU1A | 6 | r | 127453237 | 127456600 | RRM 2 | ||||
| Zm | 1097 | GRMZM2G308713_T01 | Prp39 | zmPrp39b | 1 | f | 219128644 | 219141472 | HAT 4 |