Vector Contamination List

At PlantGDB, efforts are undertaken to identify and remove all contaminant DNA so that a clean dataset is made available to researchers. Here, we use the Vmatch program (with options -l 50 -identity 90) to screen EST sequences against UniVec for vector contaminations as well as against E. coli genomes for bacterial sequences contaminations. The table lists the individual contaminated sequence. (Return to Vector Contamination menu)



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Sequence ID Organism Sequence Type Contamination Type
51452795Camellia_sinensisESTVector
51452951Camellia_sinensisESTVector
51453056Camellia_sinensisESTVector
51453123Camellia_sinensisESTVector
51453218Camellia_sinensisESTVector
51453221Camellia_sinensisESTVector
51453327Camellia_sinensisESTVector
51453368Camellia_sinensisESTVector
51453376Camellia_sinensisESTVector
51453598Camellia_sinensisESTVector
51453813Camellia_sinensisESTVector
51530115Camellia_sinensisESTVector
206583670Camellia_sinensisESTVector
206583673Camellia_sinensisESTVector
328683786Camellia_sinensisESTVector
328683890Camellia_sinensisESTVector
328683891Camellia_sinensisESTVector
328683899Camellia_sinensisESTVector
328683903Camellia_sinensisESTVector
328683920Camellia_sinensisESTVector
328683928Camellia_sinensisESTVector
328683929Camellia_sinensisESTVector
328683932Camellia_sinensisESTVector
328683950Camellia_sinensisESTVector
328683962Camellia_sinensisESTVector
328683970Camellia_sinensisESTVector
328683972Camellia_sinensisESTVector
328683995Camellia_sinensisESTVector
328683998Camellia_sinensisESTVector
328684021Camellia_sinensisESTVector
328684024Camellia_sinensisESTVector
328684029Camellia_sinensisESTVector
328684049Camellia_sinensisESTVector
328684060Camellia_sinensisESTVector
328684064Camellia_sinensisESTVector
347360404Camellia_sinensisESTVector
347360428Camellia_sinensisESTVector
347360461Camellia_sinensisESTVector
284026212Camellia_sinensisESTVector
145309132Camellia_sinensisESTVector
145309133Camellia_sinensisESTVector
145309134Camellia_sinensisESTVector
145309137Camellia_sinensisESTVector
145309143Camellia_sinensisESTVector
145309158Camellia_sinensisESTVector
145309167Camellia_sinensisESTVector
145309175Camellia_sinensisESTVector
145309178Camellia_sinensisESTVector
145309179Camellia_sinensisESTVector
145309183Camellia_sinensisESTVector
290775571Camellia_sinensisESTVector
327360532Camellia_sinensisESTVector
327360534Camellia_sinensisESTVector
327360571Camellia_sinensisESTVector
327360575Camellia_sinensisESTVector
327360599Camellia_sinensisESTVector
327360623Camellia_sinensisESTVector
327360630Camellia_sinensisESTVector
327360649Camellia_sinensisESTVector
327360702Camellia_sinensisESTVector
327360711Camellia_sinensisESTVector
327360724Camellia_sinensisESTVector
327361151Camellia_sinensisESTVector
327361021Camellia_sinensisESTVector
327361023Camellia_sinensisESTVector
327361026Camellia_sinensisESTVector
327361031Camellia_sinensisESTVector
327361136Camellia_sinensisESTVector
215399004Camellia_sinensisESTVector
215399013Camellia_sinensisESTVector
215399036Camellia_sinensisESTVector
305638124Camellia_sinensisESTVector
259016607Camellia_sinensisESTVector
259016620Camellia_sinensisESTVector
259016621Camellia_sinensisESTVector
259016635Camellia_sinensisESTVector
259016644Camellia_sinensisESTVector
64075584Camellia_sinensisESTVector
64075662Camellia_sinensisESTVector
55282080Camellia_sinensisESTVector
212379433Camellia_sinensisESTVector
343702883Camellia_sinensisESTVector
343702999Camellia_sinensisESTVector
343702581Camellia_sinensisESTVector
343702705Camellia_sinensisESTVector
171355348Camellia_sinensisESTVector
171355089Camellia_sinensisESTVector
171355148Camellia_sinensisESTVector
289526379Camellia_sinensisESTVector
224708693Camellia_sinensisESTVector
224708721Camellia_sinensisESTVector
224708729Camellia_sinensisESTVector
224708732Camellia_sinensisESTVector
224708740Camellia_sinensisESTVector
224708761Camellia_sinensisESTVector
295345450Camellia_sinensisESTVector
295345451Camellia_sinensisESTVector
295345452Camellia_sinensisESTVector
295345453Camellia_sinensisESTVector
295345455Camellia_sinensisESTVector

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