Vector Contamination List

At PlantGDB, efforts are undertaken to identify and remove all contaminant DNA so that a clean dataset is made available to researchers. Here, we use the Vmatch program (with options -l 50 -identity 90) to screen EST sequences against UniVec for vector contaminations as well as against E. coli genomes for bacterial sequences contaminations. The table lists the individual contaminated sequence. (Return to Vector Contamination menu)



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Sequence ID Organism Sequence Type Contamination Type
15428073Beta_vulgarisESTVector
15545336Beta_vulgarisESTVector
120448569Beta_vulgarisESTVector
120448311Beta_vulgarisESTVector
120448360Beta_vulgarisESTVector
120448678Beta_vulgarisESTVector
120448372Beta_vulgarisESTVector
120448385Beta_vulgarisESTVector
120448395Beta_vulgarisESTVector
120448402Beta_vulgarisESTVector
120448425Beta_vulgarisESTVector
120448718Beta_vulgarisESTVector
120448719Beta_vulgarisESTVector
120448726Beta_vulgarisESTVector
120448451Beta_vulgarisESTVector
120448740Beta_vulgarisESTVector
120448745Beta_vulgarisESTVector
120448461Beta_vulgarisESTVector
120448750Beta_vulgarisESTVector
120448481Beta_vulgarisESTVector
120448793Beta_vulgarisESTVector
120448798Beta_vulgarisESTVector
120448504Beta_vulgarisESTVector
58225851Beta_vulgarisESTVector
58225859Beta_vulgarisESTVector
58225889Beta_vulgarisESTVector
62895940Beta_vulgarisESTVector
62895956Beta_vulgarisESTVector
62895972Beta_vulgarisESTVector
62895986Beta_vulgarisESTVector
62896027Beta_vulgarisESTVector
62896037Beta_vulgarisESTVector
62896083Beta_vulgarisESTVector
62896085Beta_vulgarisESTVector
62896086Beta_vulgarisESTVector
62896087Beta_vulgarisESTVector
62896111Beta_vulgarisESTVector
62896113Beta_vulgarisESTVector
62896120Beta_vulgarisESTVector
62896125Beta_vulgarisESTVector
62896146Beta_vulgarisESTVector
62896152Beta_vulgarisESTVector
62896157Beta_vulgarisESTVector
62896163Beta_vulgarisESTVector
62896165Beta_vulgarisESTVector
62896177Beta_vulgarisESTVector
62896180Beta_vulgarisESTVector
62896182Beta_vulgarisESTVector
62896186Beta_vulgarisESTVector
62896190Beta_vulgarisESTVector
62896193Beta_vulgarisESTVector
62896201Beta_vulgarisESTVector
62896204Beta_vulgarisESTVector
62896232Beta_vulgarisESTVector
14522307Beta_vulgarisESTVector
52597688Beta_vulgarisESTVector
52597931Beta_vulgarisESTVector
52598405Beta_vulgarisESTVector
52598492Beta_vulgarisESTVector
52598642Beta_vulgarisESTVector
31250049Beta_vulgarisESTVector
31250067Beta_vulgarisESTVector
31250068Beta_vulgarisESTVector
31250074Beta_vulgarisESTVector
21332177Beta_vulgarisESTVector
21332186Beta_vulgarisESTVector
21332191Beta_vulgarisESTVector
21332195Beta_vulgarisESTVector
21332201Beta_vulgarisESTVector
21332237Beta_vulgarisESTVector
21332241Beta_vulgarisESTVector
21332249Beta_vulgarisESTVector
21332257Beta_vulgarisESTVector
21332282Beta_vulgarisESTVector
21332286Beta_vulgarisESTVector
21332545Beta_vulgarisESTVector
21332945Beta_vulgarisESTVector
26111879Beta_vulgarisESTVector
26112089Beta_vulgarisESTVector
26112117Beta_vulgarisESTVector
26112533Beta_vulgarisESTVector
26112901Beta_vulgarisESTVector
26113131Beta_vulgarisESTVector
26113310Beta_vulgarisESTVector
26113323Beta_vulgarisESTVector
26113550Beta_vulgarisESTVector
26113799Beta_vulgarisESTVector
26114540Beta_vulgarisESTVector
26114572Beta_vulgarisESTVector
26114640Beta_vulgarisESTVector
26114726Beta_vulgarisESTVector
26115101Beta_vulgarisESTVector
26115113Beta_vulgarisESTVector
26115274Beta_vulgarisESTVector
26115370Beta_vulgarisESTVector
26115376Beta_vulgarisESTVector
26115999Beta_vulgarisESTVector
26116013Beta_vulgarisESTVector
26116070Beta_vulgarisESTVector
26116078Beta_vulgarisESTVector

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