Vector Contamination List

At PlantGDB, efforts are undertaken to identify and remove all contaminant DNA so that a clean dataset is made available to researchers. Here, we use the Vmatch program (with options -l 50 -identity 90) to screen EST sequences against UniVec for vector contaminations as well as against E. coli genomes for bacterial sequences contaminations. The table lists the individual contaminated sequence. (Return to Vector Contamination menu)



Skip to page: 1 2 3
Sequence ID Organism Sequence Type Contamination Type
240347742Avena_barbataESTVector
240345959Avena_barbataESTVector
240347307Avena_barbataESTVector
240347308Avena_barbataESTVector
240338530Avena_barbataESTVector
240340749Avena_barbataESTVector
240352535Avena_barbataESTVector
240357971Avena_barbataESTVector
240357994Avena_barbataESTVector
240358514Avena_barbataESTVector
240358676Avena_barbataESTVector
240351909Avena_barbataESTVector
240354877Avena_barbataESTVector
240350689Avena_barbataESTVector
240357246Avena_barbataESTVector
240357512Avena_barbataESTVector
240357621Avena_barbataESTVector
240354004Avena_barbataESTVector
240371895Avena_barbataESTVector
240372412Avena_barbataESTVector
240372499Avena_barbataESTVector
240361640Avena_barbataESTVector
240361641Avena_barbataESTVector
240364020Avena_barbataESTVector
240364026Avena_barbataESTVector
240369068Avena_barbataESTVector
240370775Avena_barbataESTVector
240371231Avena_barbataESTVector
240371247Avena_barbataESTVector
240364653Avena_barbataESTVector
240364836Avena_barbataESTVector
240364875Avena_barbataESTVector
240365109Avena_barbataESTVector
240365144Avena_barbataESTVector
240365145Avena_barbataESTVector
240371639Avena_barbataESTVector
240361756Avena_barbataESTVector
240365902Avena_barbataESTVector
240367344Avena_barbataESTVector
240367414Avena_barbataESTVector
240367948Avena_barbataESTVector
240368138Avena_barbataESTVector
240368550Avena_barbataESTVector
240359050Avena_barbataESTVector
240360610Avena_barbataESTVector
240360621Avena_barbataESTVector
240375304Avena_barbataESTVector
240375679Avena_barbataESTVector
240374613Avena_barbataESTVector
240377357Avena_barbataESTVector
240290211Avena_barbataESTVector
240290364Avena_barbataESTVector
240290429Avena_barbataESTVector
240290556Avena_barbataESTVector
240286655Avena_barbataESTVector
240287130Avena_barbataESTVector
240287201Avena_barbataESTVector
240287378Avena_barbataESTVector
240287458Avena_barbataESTVector
240290112Avena_barbataESTVector
240292810Avena_barbataESTVector
240292880Avena_barbataESTVector
240293463Avena_barbataESTVector
240293499Avena_barbataESTVector
240293536Avena_barbataESTVector
240293690Avena_barbataESTVector
240287525Avena_barbataESTVector
240287587Avena_barbataESTVector
240287801Avena_barbataESTVector
240288271Avena_barbataESTVector
240290817Avena_barbataESTVector
240290867Avena_barbataESTVector
240290969Avena_barbataESTVector
240291068Avena_barbataESTVector
240291179Avena_barbataESTVector
240291249Avena_barbataESTVector
240291371Avena_barbataESTVector
240291404Avena_barbataESTVector
240292737Avena_barbataESTVector
240293704Avena_barbataESTVector
240293723Avena_barbataESTVector
240293974Avena_barbataESTVector
240294155Avena_barbataESTVector
240298820Avena_barbataESTVector
240298881Avena_barbataESTVector
240298905Avena_barbataESTVector
240298944Avena_barbataESTVector
240299346Avena_barbataESTVector
240299360Avena_barbataESTVector
240299418Avena_barbataESTVector
240299488Avena_barbataESTVector
240299573Avena_barbataESTVector
240299639Avena_barbataESTVector
240299640Avena_barbataESTVector
240299687Avena_barbataESTVector
240302763Avena_barbataESTVector
240302829Avena_barbataESTVector
240302851Avena_barbataESTVector
240302883Avena_barbataESTVector
240302905Avena_barbataESTVector

Loading Help Page...Thanks for your patience!

Loading Video...Thanks for your patience!

Loading Image...Thanks for your patience!