Vector Contamination List

At PlantGDB, efforts are undertaken to identify and remove all contaminant DNA so that a clean dataset is made available to researchers. Here, we use the Vmatch program (with options -l 50 -identity 90) to screen EST sequences against UniVec for vector contaminations as well as against E. coli genomes for bacterial sequences contaminations. The table lists the individual contaminated sequence. (Return to Vector Contamination menu)



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Sequence ID Organism Sequence Type Contamination Type
107954515Arachis_hypogaeaESTVector
107954525Arachis_hypogaeaESTVector
107954530Arachis_hypogaeaESTVector
107954532Arachis_hypogaeaESTVector
107954565Arachis_hypogaeaESTVector
107954566Arachis_hypogaeaESTVector
107954577Arachis_hypogaeaESTVector
107954581Arachis_hypogaeaESTVector
107954588Arachis_hypogaeaESTVector
107954591Arachis_hypogaeaESTVector
107954605Arachis_hypogaeaESTVector
107954607Arachis_hypogaeaESTVector
107954620Arachis_hypogaeaESTVector
107954622Arachis_hypogaeaESTVector
107954629Arachis_hypogaeaESTVector
107954641Arachis_hypogaeaESTVector
107954643Arachis_hypogaeaESTVector
107954648Arachis_hypogaeaESTVector
107954652Arachis_hypogaeaESTVector
107954658Arachis_hypogaeaESTVector
107954661Arachis_hypogaeaESTVector
107954663Arachis_hypogaeaESTVector
107954665Arachis_hypogaeaESTVector
107954667Arachis_hypogaeaESTVector
107954668Arachis_hypogaeaESTVector
107954669Arachis_hypogaeaESTVector
107954697Arachis_hypogaeaESTVector
107954711Arachis_hypogaeaESTVector
107954713Arachis_hypogaeaESTVector
107954722Arachis_hypogaeaESTVector
107954733Arachis_hypogaeaESTVector
107954737Arachis_hypogaeaESTVector
107954764Arachis_hypogaeaESTVector
107954768Arachis_hypogaeaESTVector
107954776Arachis_hypogaeaESTVector
107954777Arachis_hypogaeaESTVector
107954779Arachis_hypogaeaESTVector
107954782Arachis_hypogaeaESTVector
107954784Arachis_hypogaeaESTVector
107954786Arachis_hypogaeaESTVector
107954793Arachis_hypogaeaESTVector
107954800Arachis_hypogaeaESTVector
107954802Arachis_hypogaeaESTVector
107954804Arachis_hypogaeaESTVector
107954808Arachis_hypogaeaESTVector
107954815Arachis_hypogaeaESTVector
107954826Arachis_hypogaeaESTVector
107954835Arachis_hypogaeaESTVector
107954842Arachis_hypogaeaESTVector
107954844Arachis_hypogaeaESTVector
107954867Arachis_hypogaeaESTVector
107954869Arachis_hypogaeaESTVector
107954871Arachis_hypogaeaESTVector
107954873Arachis_hypogaeaESTVector
107954875Arachis_hypogaeaESTVector
107954878Arachis_hypogaeaESTVector
107954880Arachis_hypogaeaESTVector
107954913Arachis_hypogaeaESTVector
107954954Arachis_hypogaeaESTVector
107954955Arachis_hypogaeaESTVector
107954972Arachis_hypogaeaESTVector
107954975Arachis_hypogaeaESTVector
107954980Arachis_hypogaeaESTVector
107954993Arachis_hypogaeaESTVector
107955016Arachis_hypogaeaESTVector
107955026Arachis_hypogaeaESTVector
107955028Arachis_hypogaeaESTVector
107955033Arachis_hypogaeaESTVector
107955035Arachis_hypogaeaESTVector
108954650Arachis_hypogaeaESTVector
108954652Arachis_hypogaeaESTVector
108954655Arachis_hypogaeaESTVector
108954657Arachis_hypogaeaESTVector
108954658Arachis_hypogaeaESTVector
108954665Arachis_hypogaeaESTVector
108954667Arachis_hypogaeaESTVector
108954692Arachis_hypogaeaESTVector
108954697Arachis_hypogaeaESTVector
108954711Arachis_hypogaeaESTVector
108954712Arachis_hypogaeaESTVector
108954714Arachis_hypogaeaESTVector
108954715Arachis_hypogaeaESTVector
108954717Arachis_hypogaeaESTVector
108954754Arachis_hypogaeaESTVector
108954759Arachis_hypogaeaESTVector
108954765Arachis_hypogaeaESTVector
108954797Arachis_hypogaeaESTVector
108954801Arachis_hypogaeaESTVector
108954803Arachis_hypogaeaESTVector
108954805Arachis_hypogaeaESTVector
108954806Arachis_hypogaeaESTVector
108954807Arachis_hypogaeaESTVector
108954817Arachis_hypogaeaESTVector
108954819Arachis_hypogaeaESTVector
108954826Arachis_hypogaeaESTVector
108954839Arachis_hypogaeaESTVector
108954840Arachis_hypogaeaESTVector
108954844Arachis_hypogaeaESTVector
108954852Arachis_hypogaeaESTVector
108954864Arachis_hypogaeaESTVector

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