Vector Contamination List

At PlantGDB, efforts are undertaken to identify and remove all contaminant DNA so that a clean dataset is made available to researchers. Here, we use the Vmatch program (with options -l 50 -identity 90) to screen EST sequences against UniVec for vector contaminations as well as against E. coli genomes for bacterial sequences contaminations. The table lists the individual contaminated sequence. (Return to Vector Contamination menu)

Sequence ID Organism Sequence Type Contamination Type
225595414Arachis_hypogaeaESTBacteria
225607704Arachis_hypogaeaESTBacteria
110815108Arachis_hypogaeaESTBacteria
110813052Arachis_hypogaeaESTBacteria
339652940Arachis_hypogaeaESTBacteria
339653329Arachis_hypogaeaESTBacteria
339653810Arachis_hypogaeaESTBacteria
339651091Arachis_hypogaeaESTBacteria
339652094Arachis_hypogaeaESTBacteria
339650592Arachis_hypogaeaESTBacteria
339659659Arachis_hypogaeaESTBacteria
339661325Arachis_hypogaeaESTBacteria
339661442Arachis_hypogaeaESTBacteria
339662534Arachis_hypogaeaESTBacteria
339656177Arachis_hypogaeaESTBacteria
339654967Arachis_hypogaeaESTBacteria
339656618Arachis_hypogaeaESTBacteria
339658142Arachis_hypogaeaESTBacteria
339658602Arachis_hypogaeaESTBacteria
339666889Arachis_hypogaeaESTBacteria
339668136Arachis_hypogaeaESTBacteria
339669055Arachis_hypogaeaESTBacteria
339669330Arachis_hypogaeaESTBacteria
339669668Arachis_hypogaeaESTBacteria
339688097Arachis_hypogaeaESTBacteria
339691307Arachis_hypogaeaESTBacteria
339694723Arachis_hypogaeaESTBacteria
339695043Arachis_hypogaeaESTBacteria
339699679Arachis_hypogaeaESTBacteria
339696721Arachis_hypogaeaESTBacteria
339699995Arachis_hypogaeaESTBacteria
339700562Arachis_hypogaeaESTBacteria
339704008Arachis_hypogaeaESTBacteria
292398258Arachis_hypogaeaESTBacteria
339708707Arachis_hypogaeaESTBacteria
339711379Arachis_hypogaeaESTBacteria
339711466Arachis_hypogaeaESTBacteria
339709714Arachis_hypogaeaESTBacteria
339709858Arachis_hypogaeaESTBacteria
339714076Arachis_hypogaeaESTBacteria
224927012Arachis_hypogaeaESTBacteria
224927737Arachis_hypogaeaESTBacteria
224929570Arachis_hypogaeaESTBacteria
224928367Arachis_hypogaeaESTBacteria
224928052Arachis_hypogaeaESTBacteria
224929094Arachis_hypogaeaESTBacteria
224928249Arachis_hypogaeaESTBacteria
224930478Arachis_hypogaeaESTBacteria
224927199Arachis_hypogaeaESTBacteria
224927243Arachis_hypogaeaESTBacteria
224927908Arachis_hypogaeaESTBacteria
224929643Arachis_hypogaeaESTBacteria
224934533Arachis_hypogaeaESTBacteria
224935132Arachis_hypogaeaESTBacteria
224932837Arachis_hypogaeaESTBacteria
224934590Arachis_hypogaeaESTBacteria
224933661Arachis_hypogaeaESTBacteria
224934837Arachis_hypogaeaESTBacteria
224933093Arachis_hypogaeaESTBacteria
224934699Arachis_hypogaeaESTBacteria
224934725Arachis_hypogaeaESTBacteria
224931828Arachis_hypogaeaESTBacteria
224932090Arachis_hypogaeaESTBacteria
224933885Arachis_hypogaeaESTBacteria
224933900Arachis_hypogaeaESTBacteria
224930640Arachis_hypogaeaESTBacteria
224931528Arachis_hypogaeaESTBacteria
224934028Arachis_hypogaeaESTBacteria
224931666Arachis_hypogaeaESTBacteria
224938955Arachis_hypogaeaESTBacteria
224936676Arachis_hypogaeaESTBacteria
224937619Arachis_hypogaeaESTBacteria
224937220Arachis_hypogaeaESTBacteria
224935681Arachis_hypogaeaESTBacteria
224935357Arachis_hypogaeaESTBacteria
149649416Arachis_hypogaeaESTBacteria
149652523Arachis_hypogaeaESTBacteria
149655600Arachis_hypogaeaESTBacteria
207494920Arachis_hypogaeaESTBacteria
207491089Arachis_hypogaeaESTBacteria
207462969Arachis_hypogaeaESTBacteria
207441329Arachis_hypogaeaESTBacteria
207389283Arachis_hypogaeaESTBacteria
207395715Arachis_hypogaeaESTBacteria
207422646Arachis_hypogaeaESTBacteria
30419439Arachis_hypogaeaESTBacteria

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