Vector Contamination List

At PlantGDB, efforts are undertaken to identify and remove all contaminant DNA so that a clean dataset is made available to researchers. Here, we use the Vmatch program (with options -l 50 -identity 90) to screen EST sequences against UniVec for vector contaminations as well as against E. coli genomes for bacterial sequences contaminations. The table lists the individual contaminated sequence. (Return to Vector Contamination menu)



Skip to page: 1 2 3 4 5 6 7 8 9 10 11 21 31 41 51 61 71 81 91 101 111 121 126
Sequence ID Organism Sequence Type Contamination Type
37426619Arabidopsis_thalianaESTVector
37426666Arabidopsis_thalianaESTVector
37426776Arabidopsis_thalianaESTVector
37426778Arabidopsis_thalianaESTVector
37426893Arabidopsis_thalianaESTVector
37426894Arabidopsis_thalianaESTVector
37426918Arabidopsis_thalianaESTVector
37426936Arabidopsis_thalianaESTVector
37426938Arabidopsis_thalianaESTVector
37426991Arabidopsis_thalianaESTVector
37426993Arabidopsis_thalianaESTVector
37427061Arabidopsis_thalianaESTVector
37427115Arabidopsis_thalianaESTVector
37427117Arabidopsis_thalianaESTVector
37427119Arabidopsis_thalianaESTVector
37427135Arabidopsis_thalianaESTVector
37427136Arabidopsis_thalianaESTVector
37427199Arabidopsis_thalianaESTVector
37427200Arabidopsis_thalianaESTVector
37427234Arabidopsis_thalianaESTVector
37427261Arabidopsis_thalianaESTVector
37427267Arabidopsis_thalianaESTVector
37427280Arabidopsis_thalianaESTVector
37427353Arabidopsis_thalianaESTVector
37427365Arabidopsis_thalianaESTVector
37427389Arabidopsis_thalianaESTVector
37427401Arabidopsis_thalianaESTVector
37427468Arabidopsis_thalianaESTVector
37427478Arabidopsis_thalianaESTVector
37427486Arabidopsis_thalianaESTVector
37427499Arabidopsis_thalianaESTVector
37427521Arabidopsis_thalianaESTVector
37427533Arabidopsis_thalianaESTVector
37427539Arabidopsis_thalianaESTVector
37427566Arabidopsis_thalianaESTVector
37427580Arabidopsis_thalianaESTVector
37427601Arabidopsis_thalianaESTVector
37427717Arabidopsis_thalianaESTVector
37427749Arabidopsis_thalianaESTVector
37427768Arabidopsis_thalianaESTVector
37427802Arabidopsis_thalianaESTVector
37427806Arabidopsis_thalianaESTVector
37427808Arabidopsis_thalianaESTVector
37427810Arabidopsis_thalianaESTVector
37427859Arabidopsis_thalianaESTVector
37427867Arabidopsis_thalianaESTVector
37427933Arabidopsis_thalianaESTVector
37427952Arabidopsis_thalianaESTVector
37427990Arabidopsis_thalianaESTVector
37428001Arabidopsis_thalianaESTVector
37428026Arabidopsis_thalianaESTVector
37428030Arabidopsis_thalianaESTVector
37428100Arabidopsis_thalianaESTVector
37428137Arabidopsis_thalianaESTVector
37428175Arabidopsis_thalianaESTVector
37428232Arabidopsis_thalianaESTVector
37428243Arabidopsis_thalianaESTVector
37428281Arabidopsis_thalianaESTVector
37428299Arabidopsis_thalianaESTVector
37428310Arabidopsis_thalianaESTVector
37428312Arabidopsis_thalianaESTVector
37428324Arabidopsis_thalianaESTVector
37428326Arabidopsis_thalianaESTVector
37428400Arabidopsis_thalianaESTVector
37428402Arabidopsis_thalianaESTVector
37428513Arabidopsis_thalianaESTVector
37428517Arabidopsis_thalianaESTVector
37428564Arabidopsis_thalianaESTVector
37428585Arabidopsis_thalianaESTVector
37428635Arabidopsis_thalianaESTVector
37428723Arabidopsis_thalianaESTVector
37428725Arabidopsis_thalianaESTVector
37428806Arabidopsis_thalianaESTVector
37428808Arabidopsis_thalianaESTVector
37428822Arabidopsis_thalianaESTVector
37428958Arabidopsis_thalianaESTVector
37428961Arabidopsis_thalianaESTVector
37429017Arabidopsis_thalianaESTVector
37429050Arabidopsis_thalianaESTVector
37429081Arabidopsis_thalianaESTVector
37429091Arabidopsis_thalianaESTVector
37429122Arabidopsis_thalianaESTVector
37429132Arabidopsis_thalianaESTVector
37429136Arabidopsis_thalianaESTVector
37429145Arabidopsis_thalianaESTVector
37429153Arabidopsis_thalianaESTVector
37429157Arabidopsis_thalianaESTVector
37429169Arabidopsis_thalianaESTVector
37429175Arabidopsis_thalianaESTVector
37429203Arabidopsis_thalianaESTVector
37429205Arabidopsis_thalianaESTVector
37429207Arabidopsis_thalianaESTVector
37429249Arabidopsis_thalianaESTVector
37429271Arabidopsis_thalianaESTVector
37429277Arabidopsis_thalianaESTVector
37429281Arabidopsis_thalianaESTVector
37429325Arabidopsis_thalianaESTVector
37429386Arabidopsis_thalianaESTVector
37429418Arabidopsis_thalianaESTVector
37429434Arabidopsis_thalianaESTVector

Loading Help Page...Thanks for your patience!

Loading Video...Thanks for your patience!

Loading Image...Thanks for your patience!