Vector Contamination List

At PlantGDB, efforts are undertaken to identify and remove all contaminant DNA so that a clean dataset is made available to researchers. Here, we use the Vmatch program (with options -l 50 -identity 90) to screen EST sequences against UniVec for vector contaminations as well as against E. coli genomes for bacterial sequences contaminations. The table lists the individual contaminated sequence. (Return to Vector Contamination menu)



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Sequence ID Organism Sequence Type Contamination Type
51366909Amborella_trichopodaESTVector
51367831Amborella_trichopodaESTVector
51367867Amborella_trichopodaESTVector
51371792Amborella_trichopodaESTVector
42636716Amborella_trichopodaESTVector
42637728Amborella_trichopodaESTVector
42642823Amborella_trichopodaESTVector
42644340Amborella_trichopodaESTVector
42647795Amborella_trichopodaESTVector
42648778Amborella_trichopodaESTVector
42650108Amborella_trichopodaESTVector
42651090Amborella_trichopodaESTVector
42651272Amborella_trichopodaESTVector
42654418Amborella_trichopodaESTVector
42654538Amborella_trichopodaESTVector
51357429Amborella_trichopodaESTVector
164614914Amborella_trichopodaESTVector
164615356Amborella_trichopodaESTVector
164615821Amborella_trichopodaESTVector
164615165Amborella_trichopodaESTVector
164615540Amborella_trichopodaESTVector
164615576Amborella_trichopodaESTVector
164615694Amborella_trichopodaESTVector
164615235Amborella_trichopodaESTVector
164616627Amborella_trichopodaESTVector
164616519Amborella_trichopodaESTVector
164617159Amborella_trichopodaESTVector
164617504Amborella_trichopodaESTVector
164617613Amborella_trichopodaESTVector
164617044Amborella_trichopodaESTVector
164617911Amborella_trichopodaESTVector
164618481Amborella_trichopodaESTVector
164619109Amborella_trichopodaESTVector
164619125Amborella_trichopodaESTVector
164619287Amborella_trichopodaESTVector
164619444Amborella_trichopodaESTVector
164620122Amborella_trichopodaESTVector
164620243Amborella_trichopodaESTVector
164619803Amborella_trichopodaESTVector
164620261Amborella_trichopodaESTVector
164620676Amborella_trichopodaESTVector
164620691Amborella_trichopodaESTVector
164621265Amborella_trichopodaESTVector
164621669Amborella_trichopodaESTVector
164621680Amborella_trichopodaESTVector
164622506Amborella_trichopodaESTVector
164623655Amborella_trichopodaESTVector
164623458Amborella_trichopodaESTVector
164623459Amborella_trichopodaESTVector
164623489Amborella_trichopodaESTVector
164623669Amborella_trichopodaESTVector
164623762Amborella_trichopodaESTVector
164623856Amborella_trichopodaESTVector
164623866Amborella_trichopodaESTVector
164623940Amborella_trichopodaESTVector
164623943Amborella_trichopodaESTVector
164623800Amborella_trichopodaESTVector
164624143Amborella_trichopodaESTVector
164624194Amborella_trichopodaESTVector
164624244Amborella_trichopodaESTVector
164624260Amborella_trichopodaESTVector
164624262Amborella_trichopodaESTVector
164624124Amborella_trichopodaESTVector
164624340Amborella_trichopodaESTVector
164624380Amborella_trichopodaESTVector
164624392Amborella_trichopodaESTVector
164624443Amborella_trichopodaESTVector
164624487Amborella_trichopodaESTVector
164624562Amborella_trichopodaESTVector
164624599Amborella_trichopodaESTVector
164624635Amborella_trichopodaESTVector
164624640Amborella_trichopodaESTVector
164624712Amborella_trichopodaESTVector
164624725Amborella_trichopodaESTVector
164624524Amborella_trichopodaESTVector
164624941Amborella_trichopodaESTVector
164624962Amborella_trichopodaESTVector
164625018Amborella_trichopodaESTVector
164625063Amborella_trichopodaESTVector
164625193Amborella_trichopodaESTVector
164625357Amborella_trichopodaESTVector
164625385Amborella_trichopodaESTVector
164625460Amborella_trichopodaESTVector
164625470Amborella_trichopodaESTVector
164625603Amborella_trichopodaESTVector
164625605Amborella_trichopodaESTVector
164625753Amborella_trichopodaESTVector
164625768Amborella_trichopodaESTVector
164625823Amborella_trichopodaESTVector
164625831Amborella_trichopodaESTVector
164625852Amborella_trichopodaESTVector
164626166Amborella_trichopodaESTVector
164626040Amborella_trichopodaESTVector
164626766Amborella_trichopodaESTVector
164626990Amborella_trichopodaESTVector
164627063Amborella_trichopodaESTVector
164626419Amborella_trichopodaESTVector
164626423Amborella_trichopodaESTVector
164626683Amborella_trichopodaESTVector
164626274Amborella_trichopodaESTVector

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