Vector Contamination List

At PlantGDB, efforts are undertaken to identify and remove all contaminant DNA so that a clean dataset is made available to researchers. Here, we use the Vmatch program (with options -l 50 -identity 90) to screen EST sequences against UniVec for vector contaminations as well as against E. coli genomes for bacterial sequences contaminations. The table lists the individual contaminated sequence. (Return to Vector Contamination menu)

Sequence ID Organism Sequence Type Contamination Type
33526508Acetabularia_acetabulumESTVector
106775684Acetabularia_acetabulumESTVector
106775695Acetabularia_acetabulumESTVector
106775697Acetabularia_acetabulumESTVector
106775698Acetabularia_acetabulumESTVector
106775699Acetabularia_acetabulumESTVector
106775700Acetabularia_acetabulumESTVector
106775703Acetabularia_acetabulumESTVector
106775704Acetabularia_acetabulumESTVector
106775705Acetabularia_acetabulumESTVector
106775706Acetabularia_acetabulumESTVector
106775707Acetabularia_acetabulumESTVector
106775709Acetabularia_acetabulumESTVector
106775710Acetabularia_acetabulumESTVector
106775711Acetabularia_acetabulumESTVector
106775712Acetabularia_acetabulumESTVector
106775713Acetabularia_acetabulumESTVector
106775714Acetabularia_acetabulumESTVector
106775715Acetabularia_acetabulumESTVector
106775716Acetabularia_acetabulumESTVector
106775717Acetabularia_acetabulumESTVector
106775718Acetabularia_acetabulumESTVector
106775719Acetabularia_acetabulumESTVector
106775720Acetabularia_acetabulumESTVector
106775722Acetabularia_acetabulumESTVector
106775723Acetabularia_acetabulumESTVector
106775725Acetabularia_acetabulumESTVector
106775726Acetabularia_acetabulumESTVector
106775728Acetabularia_acetabulumESTVector
106775729Acetabularia_acetabulumESTVector
106775730Acetabularia_acetabulumESTVector
106775731Acetabularia_acetabulumESTVector
106775732Acetabularia_acetabulumESTVector
106775733Acetabularia_acetabulumESTVector
106775734Acetabularia_acetabulumESTVector
106775736Acetabularia_acetabulumESTVector
106775737Acetabularia_acetabulumESTVector
106775738Acetabularia_acetabulumESTVector
106775739Acetabularia_acetabulumESTVector
106775740Acetabularia_acetabulumESTVector
106775741Acetabularia_acetabulumESTVector
106775742Acetabularia_acetabulumESTVector
106775744Acetabularia_acetabulumESTVector
106775745Acetabularia_acetabulumESTVector
106775747Acetabularia_acetabulumESTVector
106775749Acetabularia_acetabulumESTVector
106775750Acetabularia_acetabulumESTVector
106775751Acetabularia_acetabulumESTVector
106775753Acetabularia_acetabulumESTVector
106775760Acetabularia_acetabulumESTVector
106775761Acetabularia_acetabulumESTVector
106775763Acetabularia_acetabulumESTVector
106775766Acetabularia_acetabulumESTVector
106775769Acetabularia_acetabulumESTVector
106775770Acetabularia_acetabulumESTVector
106775775Acetabularia_acetabulumESTVector
106775776Acetabularia_acetabulumESTVector
106775777Acetabularia_acetabulumESTVector
106775779Acetabularia_acetabulumESTVector
106775786Acetabularia_acetabulumESTVector
106775811Acetabularia_acetabulumESTVector
106775823Acetabularia_acetabulumESTVector
106775885Acetabularia_acetabulumESTVector
106775909Acetabularia_acetabulumESTVector
106775976Acetabularia_acetabulumESTVector
106776039Acetabularia_acetabulumESTVector
106776049Acetabularia_acetabulumESTVector
106776081Acetabularia_acetabulumESTVector
106776095Acetabularia_acetabulumESTVector
106776118Acetabularia_acetabulumESTVector
106776208Acetabularia_acetabulumESTVector
106776342Acetabularia_acetabulumESTVector
106777181Acetabularia_acetabulumESTVector
106777235Acetabularia_acetabulumESTVector
106777908Acetabularia_acetabulumESTVector
106777968Acetabularia_acetabulumESTVector
106778021Acetabularia_acetabulumESTVector
106778091Acetabularia_acetabulumESTVector
106778156Acetabularia_acetabulumESTVector
106779038Acetabularia_acetabulumESTVector

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