ZmGDB	CoGe	Chr	FPC Contig	BAC Accn	fDs Clone	Rice/Sorghum Protein/Maize Gene ID	Start position	End position	Description	Arabidopsis blast hit	Evalue
ZmGDB	CoGe	Chr	FPC Contig	BAC Accn	fDs Clone	Rice/Sorghum Protein/Maize Gene ID	Start position	End position	Description	Arabidopsis blast hit	Evalue
		1	contig1	AC177838		Sb02g032730.1	3	1963	similar to Putative uncharacterized protein OJ1065_E04.23	AT1G78930.1	2e-133
	..	1	contig1	AC177838		GRMZM2G059865_T01 *	4854	9652	C0P8I2_MAIZE Putative uncharacterized protein n=1 (Zea mays) Exp=0
	..	1	contig1	AC177838		GRMZM2G059865_T03 *	4857	6355	C0P8I2_MAIZE Putative uncharacterized protein n=1 (Zea mays) Exp=3e-45
	..	1	contig1	AC177838		GRMZM2G059865_T02 *	4857	9652	C0P8I2_MAIZE Putative uncharacterized protein n=1 (Zea mays) Exp=0
	..	1	contig1	AC177838		GRMZM2G394757_T01 *	110765	111506
		1	contig1	AC177838		Sb09g001135.1	113222	114727	similar to Os08g0176000 protein	ATMG00820.1	7e-24
	..	1	contig1	AC177838		GRMZM2G093399_T01 *	136307	138929
	..	1	contig1	AC177838		GRMZM2G306216_T01 *	143273	148091
	..	1	contig1	AC177838		GRMZM2G306216_T02 *	144607	145660	B4FH26_MAIZE Putative uncharacterized protein n=1 (Zea mays) Exp=5e-11
	..	1	contig1	AC177838		GRMZM2G306216_T03 *	144743	145660	B4FH26_MAIZE Putative uncharacterized protein n=1 (Zea mays) Exp=1e-11
		1	contig1	AC177838		LOC_Os07g22930.4	156767	158965	protein starch synthase, putative, expressed	AT1G32900.1	0.0
		1	contig1	AC194120		LOC_Os12g33958.1	236082	240057	protein NADH-ubiquinone oxidoreductase 49 kDa subunit, putative
		1	contig1	AC194120	fDs ID:I.W06.0278_JSR05		243725	244118	Ds transposon flanking sequence (fDs)
		1	contig1	AC194120	fDs ID:I.W06.0221_JSR05		243725	244118	Ds transposon flanking sequence (fDs)
		1	contig1	AC194120	fDs ID:I.S06.0553_JSR05		243725	244118	Ds transposon flanking sequence (fDs)
		1	contig1	AC194120	fDs ID:I.W06.0161_JSR05		243725	244118	Ds transposon flanking sequence (fDs)
	..	1	contig1	AC194120		GRMZM2G023794_T01 *	264626	265087	B6TUT6_MAIZE Putative uncharacterized protein n=1 (Zea mays) Exp=2e-28
		1	contig1	AC194120		GRMZM2G023794_T02 *	264665	270895	B6TUT6_MAIZE Putative uncharacterized protein n=1 (Zea mays) Exp=7e-29
		1	contig1	AC194120		LOC_Os01g66970.4	267004	268305	protein zinc finger, C3HC4 type domain containing protein, expressed	AT2G02960.3	1e-20
		1	contig1	AC204887		GRMZM2G137648_T01 *	371975	375908	NU5C_SORBI NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic n=216 (Poaceae) Exp=0
		1				LOC_Os10g21418.1	374003	376207	protein NADPH-dependent oxidoreductase, putative
	..	1				AC204887.4_FGT004 *	387998	388676	B6T848_MAIZE Putative uncharacterized protein n=1 (Zea mays) Exp=2e-37
		1				Sb01g050690.1	520650	521833	similar to Putative uncharacterized protein	AT2G44530.1	7e-144
		1	contig1	AC204887		GRMZM2G471814_T01 *	520742	521836	C5WNP8_SORBI Putative uncharacterized protein Sb01g050690 n=1 (Sorghum bicolor) Exp=6e-90
		1	contig1	AC204887		Sb01g029385.1	522899	523823	weakly similar to Putative uncharacterized protein	AT5G33406.1	9e-36
	..	1	contig1	AC204887		GRMZM2G330436_T01 *	526397	526955	B6T848_MAIZE Putative uncharacterized protein n=1 (Zea mays) Exp=3e-46
	..	1	contig1	AC217168		GRMZM2G441647_T01 *	534214	535483	B6T848_MAIZE Putative uncharacterized protein n=1 (Zea mays) Exp=4e-83
		1	contig1	AC195936	fDs ID:B.S05.0392_JSR01		644004	644130	Ds transposon flanking sequence (fDs)
		1	contig1	AC195936	fDs ID:B.S05.0392_JSR01		644162	644706	Ds transposon flanking sequence (fDs)
		1	contig1	AC195936		GRMZM2G333069_T01 *	644182	644959	B6SHN1_MAIZE Oleosin n=1 (Zea mays) Exp=5e-57
		1	contig1	AC195936	fDs ID:B.S05.0392_Lc18_JSR01_dir	fDs Match:Sb01g050660.1	644732	645274	fDs Match: similar to RNA methyltransferase, TrmH family protein, expressed	AT4G17610.1	0.0
		1				Sb01g050660.1	645245	669617	similar to RNA methyltransferase, TrmH family protein, expressed	AT4G17610.1	0.0
		1	contig1	AC206949		GRMZM2G399700_T01 *	663953	669617	C5WNP5_SORBI Putative uncharacterized protein Sb01g050660 n=1 (Sorghum bicolor) Exp=0
	..	1	contig1	AC206949		GRMZM2G703460_T01 *	726996	727448
		1	contig1	AC177895		GRMZM2G172183_T02 *	967112	971417	C5WNP1_SORBI Putative uncharacterized protein Sb01g050620 n=1 (Sorghum bicolor) Exp=0
		1				Sb01g050620.1	967150	977912	similar to Cation-transporting ATPase	AT5G62670.1	0.0
		1				LOC_Os03g01120.1	967347	977912	protein E1-E2 ATPase domain containing protein, expressed	AT5G62670.1	0.0
		1				Sb02g005440.1	967350	977646	similar to Cation-transporting ATPase	AT5G62670.1	0.0
		1				LOC_Os07g09340.1	967350	977912	protein plasma membrane ATPase, putative, expressed	AT5G62670.1	0.0
		1				LOC_Os03g48310.1	967350	977912	protein plasma membrane ATPase, putative, expressed	AT5G62670.1	0.0
		1				Sb08g023070.1	967353	977912	similar to Plasma membrane ATPase 1	AT5G62670.1	0.0
		1				LOC_Os12g44150.1	967353	977912	protein plasma membrane ATPase, putative, expressed	AT5G62670.1	0.0
		1				LOC_Os05g25550.2	967672	977912	protein E1-E2 ATPase domain containing protein, expressed	AT1G80660.1	0.0
	..	1	contig1	AC177895		GRMZM2G172183_T01 *	970904	971417	C5WNP1_SORBI Putative uncharacterized protein Sb01g050620 n=1 (Sorghum bicolor) Exp=1e-41
		1	contig1	AC191595		GRMZM2G073979_T03 *	982044	983552	C4J2M3_MAIZE Putative uncharacterized protein n=1 (Zea mays) Exp=3e-123
		1	contig1	AC191595		GRMZM2G073979_T02 *	982044	983687	C4J2M3_MAIZE Putative uncharacterized protein n=1 (Zea mays) Exp=4e-99
		1	contig1	AC191595		GRMZM2G073979_T01 *	982044	984654	B4FKS4_MAIZE EREBP-4 like protein n=2 (Andropogoneae) Exp=1e-116
		1	contig1	AC191595		Sb01g050610.1	982248	984231	similar to UPF0326 protein CGI-146, putative, expressed	AT5G47310.1	3e-68
	..	1	contig1	AC191595		GRMZM2G374777_T01 *	984880	985619
		1	contig1	AC191595		GRMZM2G374779_T03 *	986315	989498	B6TEV5_MAIZE Palmitoyl-protein thioesterase 1 n=3 (Andropogoneae) Exp=4e-92
		1	contig1	AC191595		GRMZM2G374779_T02 *	986315	990067	B6TEV5_MAIZE Palmitoyl-protein thioesterase 1 n=3 (Andropogoneae) Exp=8e-138
		1	contig1	AC191595		GRMZM2G374779_T01 *	986315	990149	B6TEV5_MAIZE Palmitoyl-protein thioesterase 1 n=3 (Andropogoneae) Exp=9e-179
		1	contig1	AC191595		GRMZM2G374779_T04 *	986323	989236	B6TEV5_MAIZE Palmitoyl-protein thioesterase 1 n=3 (Andropogoneae) Exp=6e-33
		1	contig1	AC191595		Sb01g050600.1	986418	989249	similar to Palmitoyl protein thioesterase containing protein, expressed	AT3G60340.2	1e-120
		1	contig1	AC191595		GRMZM2G374812_T01 *	988009	991883	B4FS29_MAIZE Hexose carrier protein HEX6 n=1 (Zea mays) Exp=0
		1	contig1	AC191595		GRMZM2G374812_T02 *	989307	991895	B4FS29_MAIZE Hexose carrier protein HEX6 n=1 (Zea mays) Exp=0
		1	contig1	AC191595		LOC_Os03g01170.1	989336	991575	protein transporter family protein, putative, expressed	AT1G11260.1	6e-141
		1	contig1	AC191595		Sb01g029030.1	989517	991575	similar to Hexose carrier protein HEX6, putative, expressed	AT5G61520.1	4e-157
		1	contig1	AC191595		LOC_Os10g41190.1	989532	991593	protein transporter family protein, putative, expressed	AT5G61520.1	4e-152
		1	contig1	AC191595		Sb01g050580.1	989541	991575	similar to Hexose carrier protein HEX6, putative, expressed	AT1G11260.1	7e-142
		1	contig1	AC191595		GRMZM2G374812_T03 *	990440	991895	C0PIJ6_MAIZE Putative uncharacterized protein n=1 (Zea mays) Exp=2e-98
	..	1	contig1	AC191595		GRMZM2G052586_T02 *	1021629	1023273	B6SV47_MAIZE Putative uncharacterized protein n=1 (Zea mays) Exp=1e-10
		1	contig1	AC191595		GRMZM2G052586_T01 *	1021629	1027122	C5Z6S1_SORBI 50S ribosomal protein L35 n=7 (Andropogoneae) Exp=3e-06
		1	contig1	AC191595		GRMZM2G052586_T03 *	1021811	1027122	Q84VR1_MAIZE 50S ribosomal protein L35 (Fragment) n=1 (Zea mays) Exp=2e-06
	..	1	contig1	AC191595		GRMZM2G052586_T04 *	1021941	1022728	B6SV47_MAIZE Putative uncharacterized protein n=1 (Zea mays) Exp=1e-10
		1	contig1	AC191595		Sb10g025480.1	1026300	1027059	similar to 50S ribosomal protein L35	AT2G24090.1	1e-22
		1				Sb01g050560.1	1162279	1183410	similar to Oxidoreductase, zinc-binding dehydrogenase family protein, expressed	AT5G61510.1	1e-127
		1	contig1	AC202923		GRMZM2G026639_T01 *	1180090	1188396	C5WNN5_SORBI Putative uncharacterized protein Sb01g050550 n=2 (Andropogoneae) Exp=0
		1	contig1	AC202923		Sb01g050550.1	1184027	1188181	similar to Expressed protein	AT5G47400.1	5e-75
	..	1	contig1	AC209978		GRMZM2G367714_T01 *	1485856	1491680	B6SPG8_MAIZE ATP-dependent rRNA helicase spb4 n=2 (Andropogoneae) Exp=6e-146
		1	contig1	AC204084		GRMZM2G097229_T01 *	1551745	1553008	C5WMV2_SORBI Putative uncharacterized protein Sb01g050440 n=1 (Sorghum bicolor) Exp=2e-136
		1	contig1	AC204084		GRMZM2G397508_T01 *	1551911	1552500
		1	contig1	AC204084		Sb01g050440.1	1552004	1552913	similar to Expansin-B4 precursor	AT1G65680.1	1e-53
		1	contig1	AC204084		GRMZM2G474194_T01 *	1649928	1651319	B6U4P4_MAIZE Beta-expansin n=3 (Zea mays) Exp=9e-144
		1	contig1	AC204084		LOC_Os03g01270.1	1650053	1650999	protein expansin precursor, putative, expressed	AT1G65680.1	6e-60
		1	contig1	AC204084		Sb01g050430.1	1650412	1650999	similar to Beta-expansin 3	AT1G65680.1	7e-51
	..	1	contig1	AC193500		GRMZM2G703462_T01 *	1739117	1739428
		1	contig1	AC193500		GRMZM2G161483_T01 *	1747308	1749512	C5WMU8_SORBI Putative uncharacterized protein Sb01g050410 n=1 (Sorghum bicolor) Exp=0
		1	contig1	AC193500		LOC_Os03g01290.1	1747316	1749485	protein peptide transporter PTR2, putative, expressed	AT1G12110.1	1e-150
		1	contig1	AC193500		Sb01g050410.1	1747344	1749510	similar to Nitrate/chlorate transporter, putative, expressed	AT1G12110.1	3e-155
		1	contig1	AC193500		GRMZM2G161540_T01 *	1764818	1767737	C5WMU5_SORBI Putative uncharacterized protein Sb01g050380 n=1 (Sorghum bicolor) Exp=0
		1	contig1	AC193500		Sb01g050390.1	1764851	1766213	similar to Flavin-containing monooxygenase family protein, putative, expressed	AT1G62600.1	2e-118
		1				AC193500.3_FGT003 *	1765068	1766219	C5WMU6_SORBI Putative uncharacterized protein Sb01g050390 n=1 (Sorghum bicolor) Exp=0
		1	contig1	AC193500		Sb01g050380.1	1766337	1767731	similar to Os10g0553600 protein	AT4G22580.1	4e-121
		1	contig1	AC193500		GRMZM2G161560_T01 *	1772516	1774496	B6TH09_MAIZE Immediate-early protein RSP40 n=3 (Zea mays) Exp=5e-11
		1	contig1	AC193500		GRMZM2G461427_T01 *	1772616	1773080
		1	contig1	AC193500		Sb01g050370.1	1772820	1774363	similar to Os01g0332900 protein
		1	contig1	AC190658		GRMZM2G379898_T01 *	1861678	1863285	C3SAB4_BRADI Proline-rich protein n=1 (Brachypodium distachyon) Exp=2e-28
		1	contig1	AC190658		GRMZM2G379898_T02 *	1862122	1863059	C3SAB4_BRADI Proline-rich protein n=1 (Brachypodium distachyon) Exp=2e-26
		1	contig1	AC190658		LOC_Os03g01320.1	1862236	1862815	protein LTPL116 - Protease inhibitor/seed storage/LTP family protein precursor, expressed	AT4G12480.1	2e-24
		1	contig1	AC194148		GRMZM2G060265_T01 *	1940414	1942490	B8BI59_ORYSI Putative uncharacterized protein n=1 (Oryza sativa subsp. indica) Exp=4e-135
		1	contig1	AC194148		GRMZM2G361164_T01 *	1940618	1942268	Q10T23_ORYSJ Expressed protein n=1 (Oryza sativa subsp. japonica) Exp=5e-50
		1	contig1	AC194148		Sb01g050333.1	1941035	1941931	similar to Putative uncharacterized protein	AT4G00150.1	5e-40
		1	contig1	AC194148		Sb10g010475.1	1941890	1942255	weakly similar to Expressed protein
		1	contig1	AC194148		GRMZM2G060296_T01 *	1947792	1954980	C5WMT6_SORBI Putative uncharacterized protein Sb01g050330 n=2 (Andropogoneae) Exp=0
		1	contig1	AC194148		GRMZM2G060296_T02 *	1947879	1954980	C5WMT6_SORBI Putative uncharacterized protein Sb01g050330 n=2 (Andropogoneae) Exp=0
		1	contig1	AC194148		GRMZM2G060296_T03 *	1947899	1954980	C5WMT6_SORBI Putative uncharacterized protein Sb01g050330 n=2 (Andropogoneae) Exp=0
		1	contig1	AC194148		Sb01g050330.1	1948107	1954588	similar to Putative uncharacterized protein	AT4G30600.1	0.0
		1	contig1	AC194148		LOC_Os08g37444.1	1948107	1954588	protein signal recognition particle receptor, putative, expressed	AT4G30600.1	0.0
		1	contig1	AC194148		GRMZM2G060296_T05 *	1953475	1954980	C5WMT6_SORBI Putative uncharacterized protein Sb01g050330 n=2 (Andropogoneae) Exp=3e-127

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Protein Alignment Table for Zea mays Chromosome version - data last updated 01 June 2009

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