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CpGDB Downloads

CpGDB encompasses primary sequence data, including the most current genomic sequence, EST and cDNA sequences from GenBank, EST assemblies (PUTs) from PlantGDB, and microarray probes. The mapping of cDNA and EST sequences onto the genome as well as interpretations of the overall data are based on our own spliced alignment results.

The links below, mirrored on our FTP site, provide bzip2 archives of primary sequence used in the current version of CpGDB, as well as the MySQL tables that comprise the spliced alignment data and coordinates for all aligned sequences. For more information on the current datasets, their sources, and alignment methods, go to our Data & Methods page.

The papaya genome assembly is still being refined and completed. CpGDB attempts to remain synchronized with the most recent release of the genome sequence or assembly (if any) and annotations. If you have any questions or comments about this genome browser, please make use of our feedback form.

NameLast modified dateFile Size
CPbac.bz2 Jan 27 2015 66.75 MB
CPbac2.bz2 Jan 27 2015 66.74 MB
CPcdna.bz2 Jan 27 2015 49.44 KB
CPest.bz2 Jan 27 2015 14.29 MB
CPpep.bz2 Jan 27 2015 4.48 MB
CPput.bz2 Jan 27 2015 8.39 MB
CPtranscript.bz2 Jan 27 2015 6.87 MB
CpGDB181.sql.bz2 Jan 27 2015 128.2 MB
Cpapaya_113.fa.bz2 Jan 27 2015 66.74 MB


NOTE: For convenient batch download of CpGDB data files, visit our FTP site

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