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PeGDB Annotated Protein Alignments

This table organizes splice-aligned proteins and their functional annotations, in linear order according to their start/end coordinates on a genomic segment. These alignments do not necessarily represent functional genes, and some genes will lack protein alignments. The search examples demonstrate how to search by Scaffold/BAC ID, Protein ID, or keyword. Click a Scaffold/BAC ID, Protein ID, Description, or Date to filter results according to that value. Click the GDB icon in column 1 to open a new window displaying the corresponding genomic region in Genome Context View. For more information, visit PlantGDB Help.

           
(search examples: 1; Medtr1g042640.1; Triacylglycerol Lip*) [ Export search result ] [ << Prev ][ Next >> ] (Showing 1 - 100 of 5787 records / 19 BACs/Scaffolds)
GDB CoGe Scaffold/BAC ID Splice-Aligned Protein ID Start position End position Description Date
GDB CoGe Scaffold/BAC ID Splice-Aligned Protein ID Start position End position Description Date
Genome Context View View with CoGe 1 Medtr7g075600.1 48986 51536 Importin-11, related chr07_pseudomolecule_IMGAG_V3 15183527-15180001 H EGN_Mt090430 20090702 2011-04-10
Genome Context View View with CoGe 1 Medtr7g097310.1 313032 314824 Chalcone and stilbene synthases, C-terminal chr07_pseudomolecule_IMGAG_V3 22016749-22014592 E EGN_Mt090430 2011-04-10
Genome Context View View with CoGe 1 Medtr7g015000.1 313038 314824 Chalcone and stilbene synthases, C-terminal chr07_pseudomolecule_IMGAG_V3 3678382-3680099 E EGN_Mt090430 2011-04-10
Genome Context View View with CoGe 1 Medtr7g139170.1 313038 313946 Chalcone and stilbene synthases, N-terminal; Chalcone and stilbene synthases, C-terminal chr07_pseudomolecule_IMGAG_V3 2011-04-10
Genome Context View View with CoGe 1 Medtr5g007810.1 313038 314824 Chalcone and stilbene synthases, C-terminal chr05_pseudomolecule_IMGAG_V3 1307712-1309413 F EGN_Mt090430 2011-04-10
Genome Context View View with CoGe 1 Medtr5g007800.1 313038 314824 Chalcone and stilbene synthases, C-terminal chr05_pseudomolecule_IMGAG_V3 1303649-1305141 E EGN_Mt090430 2011-04-10
Genome Context View View with CoGe 1 Medtr2g073900.1 313038 314824 Chalcone and stilbene synthases, C-terminal chr02_pseudomolecule_IMGAG_V3 16764088-16761473 F EGN_Mt090430 2011-04-10
Genome Context View View with CoGe 1 Medtr3g105280.1 313038 314824 Chalcone and stilbene synthases, C-terminal chr03_pseudomolecule_IMGAG_V3 26335756-26337357 E EGN_Mt090430 2011-04-10
Genome Context View View with CoGe 1 AT5G13930.1 320098 321499 TT4 (TRANSPARENT TESTA 4); naringenin-chalcone synthase | chr5:4488762-4490035 FORWARD 2011-04-10
Genome Context View View with CoGe 1 Medtr7g014960.1 320099 321483 Chalcone and stilbene synthases, C-terminal chr07_pseudomolecule_IMGAG_V3 3665921-3667472 E EGN_Mt090430 2011-04-10
Genome Context View View with CoGe 1 Medtr7g014940.1 320099 321483 Chalcone and stilbene synthases, C-terminal chr07_pseudomolecule_IMGAG_V3 3647736-3649377 F EGN_Mt090430 2011-04-10
Genome Context View View with CoGe 1 Medtr7g014980.1 320099 321483 Chalcone and stilbene synthases, C-terminal chr07_pseudomolecule_IMGAG_V3 3673568-3675387 E EGN_Mt090430 2011-04-10
Genome Context View View with CoGe 1 Medtr7g014950.1 320099 321483 Chalcone and stilbene synthases, C-terminal chr07_pseudomolecule_IMGAG_V3 3654352-3651341 E EGN_Mt090430 2011-04-10
Genome Context View View with CoGe 1 Medtr5g007840.1 320099 321483 Chalcone and stilbene synthases, C-terminal chr05_pseudomolecule_IMGAG_V3 1317587-1319306 E EGN_Mt090430 2011-04-10
Genome Context View View with CoGe 1 Medtr5g007860.1 320099 321483 Chalcone and stilbene synthases, C-terminal chr05_pseudomolecule_IMGAG_V3 1330357-1332371 E EGN_Mt090430 2011-04-10
Genome Context View View with CoGe 1 Medtr1g124580.1 320099 321483 Chalcone and stilbene synthases, C-terminal chr01_pseudomolecule_IMGAG_V3 27176080-27177727 E EGN_Mt090430 2011-04-10
Genome Context View View with CoGe 1 Medtr1g124600.1 320099 321483 Chalcone and stilbene synthases, C-terminal chr01_pseudomolecule_IMGAG_V3 27180149-27186123 E EGN_Mt090430 2011-04-10
Genome Context View View with CoGe 1 Medtr1g124570.1 320099 321483 Chalcone and stilbene synthases, C-terminal chr01_pseudomolecule_IMGAG_V3 27171880-27173521 E EGN_Mt090430 2011-04-10
Genome Context View View with CoGe 1 Medtr3g105290.1 320099 321483 Chalcone and stilbene synthases, C-terminal chr03_pseudomolecule_IMGAG_V3 26339689-26341320 E EGN_Mt090430 2011-04-10
Genome Context View View with CoGe 1 AT3G23940.1 333132 339539 dehydratase family | chr3:8648780-8652323 FORWARD 2011-04-10
Genome Context View View with CoGe 1 Medtr2g103180.1 333159 339539 Dihydroxy-acid and 6-phosphogluconate dehydratase chr02_pseudomolecule_IMGAG_V3 23921544-23913653 E EGN_Mt090430 2011-04-10
Genome Context View View with CoGe 1 AT2G33150.1 354082 356954 PKT3 (PEROXISOMAL 3-KETOACYL-COA THIOLASE 3); acetyl-CoA C-acyltransferase | chr2:14047814-14050983 2011-04-10
Genome Context View View with CoGe 1 AT1G04760.1 360157 361647 ATVAMP726 | chr1:1334760-1336070 FORWARD 2011-04-10
Genome Context View View with CoGe 1 AT1G04810.1 550734 557017 26S proteasome regulatory subunit, putative | chr1:1350304-1355261 FORWARD 2011-04-10
Genome Context View View with CoGe 1 AT2G32730.1 550737 557020 26S proteasome regulatory subunit, putative | chr2:13880189-13885464 FORWARD 2011-04-10
Genome Context View View with CoGe 1 Medtr4g156260.1 550737 557017 Armadillo-like helical chr04_pseudomolecule_IMGAG_V3 38695269-38689143 E EGN_Mt090430 20090702 2011-04-10
Genome Context View View with CoGe 1 Medtr3g017020.1 555756 556250 26S proteasome regulatory subunit rpn2, putative chr03_pseudomolecule_IMGAG_V3 3461538-3460974 E EGN_Mt090430 2011-04-10
Genome Context View View with CoGe 1 AT3G07110.1 562811 564751 60S ribosomal protein L13A (RPL13aA) | chr3:2252092-2253332 FORWARD 2011-04-10
Genome Context View View with CoGe 1 AT3G24830.1 562811 564751 60S ribosomal protein L13A (RPL13aB) | chr3:9064613-9065871 FORWARD 2011-04-10
Genome Context View View with CoGe 1 AT4G13170.1 562811 564751 60S ribosomal protein L13A (RPL13aC) | chr4:7655133-7656542 REVERSE 2011-04-10
Genome Context View View with CoGe 1 AT5G48760.1 562811 564751 60S ribosomal protein L13A (RPL13aD) | chr5:19771315-19772686 REVERSE 2011-04-10
Genome Context View View with CoGe 1 AC147501_1.1 572139 573151 Protein of unknown function DUF185 AC147501.9 177-1379 E EGN_Mt090430 20090702 2011-04-10
Genome Context View View with CoGe 1 Medtr3g105420.1 723604 727281 Metallophosphoesterase; Purple acid phosphatase, N-terminal chr03_pseudomolecule_IMGAG_V3 26387271-26391694 2011-04-10
Genome Context View View with CoGe 1 AT3G25040.1 728594 733491 ER lumen protein retaining receptor, putative / HDEL receptor, putative | chr3:9124479-9126051 FORWARD 2011-04-10
Genome Context View View with CoGe 1 Medtr1g016600.1 793124 795292 Translation elongation factor, GTP-binding chr01_pseudomolecule_IMGAG_V3 3236335-3239013 E EGN_Mt090430 2011-04-10
Genome Context View View with CoGe 1 AT1G07920.1 793332 795292 elongation factor 1-alpha / EF-1-alpha | chr1:2455559-2457001 FORWARD 2011-04-10
Genome Context View View with CoGe 1 AT1G07930.1 793332 795292 elongation factor 1-alpha / EF-1-alpha | chr1:2459014-2460458 FORWARD 2011-04-10
Genome Context View View with CoGe 1 AT1G07940.1 793332 795292 elongation factor 1-alpha / EF-1-alpha | chr1:2463350-2464792 REVERSE 2011-04-10
Genome Context View View with CoGe 1 AT5G60390.1 793332 795292 elongation factor 1-alpha / EF-1-alpha | chr5:24289226-24290675 FORWARD 2011-04-10
Genome Context View View with CoGe 1 Medtr6g022690.1 793342 795292 Translation elongation factor, GTP-binding chr06_pseudomolecule_IMGAG_V3 5101390-5097935 E EGN_Mt090430 2011-04-10
Genome Context View View with CoGe 1 Medtr6g022710.1 793342 795292 Translation elongation factor, GTP-binding chr06_pseudomolecule_IMGAG_V3 5110634-5107471 E EGN_Mt090430 2011-04-10
Genome Context View View with CoGe 1 Medtr4g012200.1 793342 795292 Translation elongation factor, GTP-binding chr04_pseudomolecule_IMGAG_V3 1985578-1982556 F EGN_Mt090430 2011-04-10
Genome Context View View with CoGe 1 Medtr7g143590.1 904472 906543 3 exoribonuclease chr07_pseudomolecule_IMGAG_V3 34495267-34490674 E EGN_Mt090430 20090702 2011-04-10
Genome Context View View with CoGe 1 AT1G22780.1 1018506 1020174 PFL (POINTED FIRST LEAVES); RNA binding / nucleic acid binding / structural constituent of ribosome 2011-04-10
Genome Context View View with CoGe 1 AT1G34030.1 1018506 1020174 40S ribosomal protein S18 (RPS18B) | chr1:12370285-12371465 REVERSE 2011-04-10
Genome Context View View with CoGe 1 AT4G09800.1 1018506 1020174 RPS18C (S18 RIBOSOMAL PROTEIN); RNA binding / nucleic acid binding / structural constituent of ribosome 2011-04-10
Genome Context View View with CoGe 1 Medtr1g124660.1 1018506 1020171 Ribosomal protein S13 chr01_pseudomolecule_IMGAG_V3 27223142-27224959 E EGN_Mt090430 20090702 2011-04-10
Genome Context View View with CoGe 1 Medtr1g124700.1 1018506 1020171 Ribosomal protein S13 chr01_pseudomolecule_IMGAG_V3 27250231-27252201 F EGN_Mt090430 20090702 2011-04-10
Genome Context View View with CoGe 1 Medtr5g006410.1 1040018 1043345 Pyridoxal-5-phosphate-dependent enzyme, beta subunit chr05_pseudomolecule_IMGAG_V3 686223-691646 E EGN_Mt090430 2011-04-10
Genome Context View View with CoGe 1 Medtr1g096590.1 1040018 1043345 Pyridoxal-5-phosphate-dependent enzyme, beta subunit chr01_pseudomolecule_IMGAG_V3 19782590-19786142 2011-04-10
Genome Context View View with CoGe 1 AT4G14880.1 1040027 1043348 OASA1 (O-ACETYLSERINE (THIOL) LYASE (OAS-TL) ISOFORM A1); cysteine synthase | chr4:8518209-8520050 REVERSE 2011-04-10
Genome Context View View with CoGe 1 AT3G22630.1 1197661 1200354 PBD1 (20S PROTEASOME BETA SUBUNIT D1); peptidase/ threonine-type endopeptidase | chr3:8009709-8010774 2011-04-10
Genome Context View View with CoGe 1 Medtr5g012550.1 1197664 1200354 20S proteasome, A and B subunits chr05_pseudomolecule_IMGAG_V3 3609776-3612408 E EGN_Mt090430 20090702 2011-04-10
Genome Context View View with CoGe 1 Medtr5g007000.1 1197667 1200354 20S proteasome, A and B subunits chr05_pseudomolecule_IMGAG_V3 927530-933448 F EGN_Mt090430 20090702 2011-04-10
Genome Context View View with CoGe 1 AT4G14800.1 1197677 1200354 PBD2 (20S PROTEASOME BETA SUBUNIT 2); peptidase/ threonine-type endopeptidase | chr4:8500398-8502058 2011-04-10
Genome Context View View with CoGe 1 Medtr5g006700.1 1313128 1316456 Protein kinase chr05_pseudomolecule_IMGAG_V3 809605-812686 E EGN_Mt090430 20090702 2011-04-10
Genome Context View View with CoGe 1 Medtr4g022930.1 1387203 1387730 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 chr04_pseudomolecule_IMGAG_V3 4799832-4799053 F 2011-04-10
Genome Context View View with CoGe 1 Medtr7g021620.1 1387203 1387730 NADH-ubiquinone/plastoquinone oxidoreductase, chain 6 chr07_pseudomolecule_IMGAG_V3 5277010-5277792 F 2011-04-10
Genome Context View View with CoGe 1 ATCG01090.1 1388133 1388646 Encodes subunit of the chloroplast NAD(P)H dehydrogenase complex | chrC:119244-119762 REVERSE 2011-04-10
Genome Context View View with CoGe 1 Medtr6g035670.1 1388164 1388646 Alpha-helical ferredoxin chr06_pseudomolecule_IMGAG_V3 7668296-7668988 F EGN_Mt090430 20090702 2011-04-10
Genome Context View View with CoGe 1 Medtr6g035940.1 1388164 1388646 Alpha-helical ferredoxin chr06_pseudomolecule_IMGAG_V3 7768541-7769413 E EGN_Mt090430 20090702 2011-04-10
Genome Context View View with CoGe 1 Medtr4g022940.1 1388164 1388646 Alpha-helical ferredoxin chr04_pseudomolecule_IMGAG_V3 4800564-4799992 F EGN_Mt090430 20090702 2011-04-10
Genome Context View View with CoGe 1 Medtr7g021610.1 1388164 1388646 Alpha-helical ferredoxin chr07_pseudomolecule_IMGAG_V3 5276293-5276866 F EGN_Mt090430 20090702 2011-04-10
Genome Context View View with CoGe 1 Medtr5g072280.1 1388164 1388466 4Fe-4S ferredoxin, iron-sulfur binding chr05_pseudomolecule_IMGAG_V3 25758601-25759459 E EGN_Mt090430 2011-04-10
Genome Context View View with CoGe 1 ATCG01100.1 1388719 1390951 NADH dehydrogenase ND1 | chrC:119847-122009 REVERSE 2011-04-10
Genome Context View View with CoGe 1 AT4G14710.1 1474050 1475887 acireductone dioxygenase [iron(II)-requiring]/ metal ion binding | chr4:8424897-8426360 REVERSE 2011-04-10
Genome Context View View with CoGe 1 AT4G14716.1 1474051 1475862 ATARD1 (ACIREDUCTONE DIOXYGENASE 1); acireductone dioxygenase [iron(II)-requiring]/ metal ion binding 2011-04-10
Genome Context View View with CoGe 1 AT3G22845.1 1522106 1524953 emp24/gp25L/p24 protein-related | chr3:8087373-8088550 FORWARD 2011-04-10
Genome Context View View with CoGe 1 AT5G43810.1 1567550 1574269 ZLL (ZWILLE); translation initiation factor | chr5:17611939-17616562 FORWARD 2011-04-10
Genome Context View View with CoGe 1 AT3G22890.1 1588376 1591757 APS1 (ATP SULFURYLASE 1); sulfate adenylyltransferase (ATP) | chr3:8112837-8114734 FORWARD 2011-04-10
Genome Context View View with CoGe 1 AT4G14640.1 1660476 1662354 CAM8 (CALMODULIN 8); calcium ion binding | chr4:8397800-8399996 FORWARD 2011-04-10
Genome Context View View with CoGe 1 Medtr7g034910.1 1660479 1662354 Calcium-binding EF-hand chr07_pseudomolecule_IMGAG_V3 8450028-8448598 E EGN_Mt090430 20090702 2011-04-10
Genome Context View View with CoGe 1 AT3G22950.1 1684771 1686684 ATARFC1 (ADP-ribosylation factor C1); GTP binding | chr3:8136364-8137513 REVERSE 2011-04-10
Genome Context View View with CoGe 1 Medtr5g096400.1 1734626 1735209 hypothetical protein chr05_pseudomolecule_IMGAG_V3 38299995-38301653 E EGN_Mt090430 20090702 2011-04-10
Genome Context View View with CoGe 1 AT5G12190.1 1734835 1735209 RNA recognition motif (RRM)-containing protein | chr5:3940731-3941105 REVERSE 2011-04-10
Genome Context View View with CoGe 1 AT5G28840.1 1737136 1739071 GME (GDP-D-MANNOSE 3',5'-EPIMERASE); GDP-mannose 3,5-epimerase/ NAD or NADH binding / catalytic | chr5:10862472-10864024 2011-04-10
Genome Context View View with CoGe 1 Medtr7g140940.1 1737136 1739279 NAD-dependent epimerase/dehydratase chr07_pseudomolecule_IMGAG_V3 34037662-34032320 E EGN_Mt090430 20090702 2011-04-10
Genome Context View View with CoGe 1 Medtr8g119040.1 1762480 1765118 Ribosomal protein S10; Chalcone and stilbene synthases, C-terminal; Very-long-chain 3-ketoacyl-CoA synthase 2011-04-10
Genome Context View View with CoGe 1 AT4G14615.1 1784848 1785500 unknown protein | chr4:8383842-8384814 FORWARD 2011-04-10
Genome Context View View with CoGe 1 AT1G04270.1 2173184 2175042 RPS15 (CYTOSOLIC RIBOSOMAL PROTEIN S15); structural constituent of ribosome | chr1:1141852-1142960 REVERSE 2011-04-10
Genome Context View View with CoGe 1 AT5G09490.1 2173184 2175042 40S ribosomal protein S15 (RPS15B) | chr5:2952378-2953183 REVERSE 2011-04-10
Genome Context View View with CoGe 1 AT5G09510.1 2173184 2175042 40S ribosomal protein S15 (RPS15D) | chr5:2955698-2956554 REVERSE 2011-04-10
Genome Context View View with CoGe 1 AT5G09500.1 2173184 2174945 40S ribosomal protein S15 (RPS15C) | chr5:2954044-2954850 REVERSE 2011-04-10
Genome Context View View with CoGe 1 AT5G43640.1 2173184 2174942 40S ribosomal protein S15 (RPS15E) | chr5:17531302-17532370 FORWARD 2011-04-10
Genome Context View View with CoGe 1 Medtr4g100680.1 2173187 2175042 Ribosomal protein S19/S15 chr04_pseudomolecule_IMGAG_V3 21579300-21582072 E EGN_Mt090430 20090702 2011-04-10
Genome Context View View with CoGe 1 Medtr4g157310.1 2173187 2175042 Ribosomal protein S19/S15 chr04_pseudomolecule_IMGAG_V3 39172832-39174727 F EGN_Mt090430 20090702 2011-04-10
Genome Context View View with CoGe 1 Medtr1g064830.1 2306930 2310243 MATH chr01_pseudomolecule_IMGAG_V3 12698264-12703066 E EGN_Mt090430 20090702 2011-04-10
Genome Context View View with CoGe 1 Medtr1g064740.1 2306986 2310243 MATH chr01_pseudomolecule_IMGAG_V3 12630612-12624919 E EGN_Mt090430 20090702 2011-04-10
Genome Context View View with CoGe 1 Medtr1g042660.1 2714595 2716536 Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase chr01_pseudomolecule_IMGAG_V3 2011-04-10
Genome Context View View with CoGe 1 Medtr7g143000.1 2715375 2716552 Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase chr07_pseudomolecule_IMGAG_V3 2011-04-10
Genome Context View View with CoGe 1 AT2G38940.1 2727040 2728650 ATPT2 (ARABIDOPSIS THALIANA PHOSPHATE TRANSPORTER 2); carbohydrate transmembrane transporter/ inorganic 2011-04-10
Genome Context View View with CoGe 1 AT2G32830.1 2727040 2728947 PHT5; inorganic phosphate transmembrane transporter/ phosphate transmembrane transporter | chr2:13927754-13929657 2011-04-10
Genome Context View View with CoGe 1 AT5G43360.1 2727040 2728605 PHT3 (PHOSPHATE TRANSPORTER 3); carbohydrate transmembrane transporter/ inorganic phosphate transmembrane 2011-04-10
Genome Context View View with CoGe 1 AT5G43370.1 2727040 2728908 APT1 (ARABIDOPSIS PHOSPHATE TRANSPORTER 1); carbohydrate transmembrane transporter/ inorganic phosphate 2011-04-10
Genome Context View View with CoGe 1 AT5G43350.1 2727040 2728908 PHT1;1 (PHOSPHATE TRANSPORTER 1;1); carbohydrate transmembrane transporter/ inorganic phosphate transmembrane 2011-04-10
Genome Context View View with CoGe 1 AT3G54700.1 2727040 2729362 carbohydrate transmembrane transporter/ phosphate transmembrane transporter/ sugar:hydrogen symporter 2011-04-10
Genome Context View View with CoGe 1 Medtr1g089530.1 2727040 2728644 Phosphate permease chr01_pseudomolecule_IMGAG_V3 17829211-17833072 E EGN_Mt090430 20090702 2011-04-10
Genome Context View View with CoGe 1 Medtr1g042680.1 2727043 2728644 Phosphate permease chr01_pseudomolecule_IMGAG_V3 9896903-9893970 E EGN_Mt090430 20090702 2011-04-10
Genome Context View View with CoGe 1 Medtr1g042690.1 2727043 2728638 Phosphate permease chr01_pseudomolecule_IMGAG_V3 9902580-9906777 E EGN_Mt090430 20090702 2011-04-10
Genome Context View View with CoGe 1 Medtr1g042640.1 2727043 2728638 Phosphate permease chr01_pseudomolecule_IMGAG_V3 9859024-9854990 E EGN_Mt090430 20090702 2011-04-10

Database lookup time: 0.59479403495789 sec

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