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GxGDB Annotated Protein Alignments

This table organizes splice-aligned proteins and their functional annotations, in linear order according to their start/end coordinates on a genomic segment. These alignments do not necessarily represent functional genes, and some genes will lack protein alignments. The search examples demonstrate how to search by Scaffold/BAC ID, Protein ID, or keyword. Click a Scaffold/BAC ID, Protein ID, Description, or Date to filter results according to that value. Click the GDB icon in column 1 to open a new window displaying the corresponding genomic region in Genome Context View. For more information, visit PlantGDB Help.

     
(search examples: 1; AT5G59690.1; Triacylglycerol Lip*) [ Export search result ] [ << Prev ][ Next >> ] (Showing 1 - 100 of 18853 records / 545 BACs/Scaffolds)
GDB CoGe Scaffold/BAC ID Splice-Aligned Protein ID Start position End position Description Date
GDB CoGe Scaffold/BAC ID Splice-Aligned Protein ID Start position End position Description Date
Genome Context View View with CoGe 1 AT4G17770.1 138254 142776 | Symbol: None | glycosyl transferase family 20 protein / trehalose-phosphatase family protein, contains 2008-04-11
Genome Context View View with CoGe 1 AT1G68020.1 139442 142776 | Symbol: None | glycosyl transferase family 20 protein / trehalose-phosphatase family protein, similar 2008-04-11
Genome Context View View with CoGe 1 AC199761_13.1 216706 218722 Cupin region AC199761.2 58416-57727 E EGN_Mt071002 20080227 2008-04-11
Genome Context View View with CoGe 1 AC199761_15.1 216706 218725 Cupin region AC199761.2 64870-64157 F EGN_Mt071002 20080227 2008-04-11
Genome Context View View with CoGe 1 AC199761_14.1 216706 218725 Cupin region AC199761.2 61389-60478 F EGN_Mt071002 20080227 2008-04-11
Genome Context View View with CoGe 1 AC202331_3.1 237776 240332 Protein kinase AC202331.4 10709-9356 H EGN_Mt071002 20080227 2008-04-11
Genome Context View View with CoGe 1 AC202331_19.1 280549 283681 Protein phosphatase 2C-like AC202331.4 87395-89467 F EGN_Mt071002 20080227 2008-04-11
Genome Context View View with CoGe 1 AT1G68410.1 280790 285303 | Symbol: None | protein phosphatase 2C-related / PP2C-related, similar to protein phosphatase-2C GB:AAC36697 2008-04-11
Genome Context View View with CoGe 1 AC202331_20.1 283664 285303 phosphatase 2C-related (exp=0; wgp=0; cg=0; c AC202331.4 89469-91104 F EGN_Mt071002 20080227 2008-04-11
Genome Context View View with CoGe 1 AC202331_16.1 304959 306867 Protein kinase AC202331.4 73180-72671 H EGN_Mt071002 20080227 2008-04-11
Genome Context View View with CoGe 1 AC202331_24.1 314598 316901 Protein kinase AC202331.4 103714-104484 E EGN_Mt071002 20080227 2008-04-11
Genome Context View View with CoGe 1 AT1G68370.1 385862 390411 | Symbol: None | gravity-responsive protein / altered response to gravity protein (ARG1), identical to 2008-04-11
Genome Context View View with CoGe 1 AT1G25450.1 732447 735325 | Symbol: None | very-long-chain fatty acid condensing enzyme, putative, nearly identical to fatty acid 2008-04-11
Genome Context View View with CoGe 1 AT1G68530.1 732447 735468 | Symbol: None | very-long-chain fatty acid condensing enzyme (CUT1), identical to very-long-chain fatty 2008-04-11
Genome Context View View with CoGe 1 AT3G25860.1 839981 847634 | Symbol: None | dihydrolipoamide S-acetyltransferase (LTA2), identical to dihydrolipoamide S-acetyltransferase 2008-04-11
Genome Context View View with CoGe 1 AT1G13320.1 882779 888961 | Symbol: None | serine/threonine protein phosphatase 2A (PP2A) 65 kDa regulatory subunit, putative, 2008-04-11
Genome Context View View with CoGe 1 AT1G25490.1 882779 888961 | Symbol: None | serine/threonine protein phosphatase 2A (PP2A) regulatory subunit A (RCN1), identical 2008-04-11
Genome Context View View with CoGe 1 AT3G25800.1 882779 888961 | Symbol: None | serine/threonine protein phosphatase 2A (PP2A) 65 KDa regulatory subunit A, identical 2008-04-11
Genome Context View View with CoGe 1 CU302332_16.1 914058 917857 Protein of unknown function DUF580 CU302332.1 90711-88569 E EGN_Mt071002 20080227 2008-04-11
Genome Context View View with CoGe 1 AT3G54300.1 1142736 1147139 | Symbol: None | synaptobrevin family protein, similar to vesicle-associated membrane protein 7B (At 2008-04-11
Genome Context View View with CoGe 1 AC199761_24.1 1164587 1166451 Ferredoxin [2Fe-2S], plant AC199761.2 115141-112764 E EGN_Mt071002 20080227 2008-04-11
Genome Context View View with CoGe 1 AT5G08415.1 1226847 1231424 | Symbol: None | lipoic acid synthase family protein, similar to lipoic acid synthase from Arabidopsis 2008-04-11
Genome Context View View with CoGe 1 AT3G54250.1 1237709 1243972 | Symbol: None | mevalonate diphosphate decarboxylase, putative, similar to mevalonate diphosphate decarboxylase 2008-04-11
Genome Context View View with CoGe 1 AT3G14290.1 1261071 1265898 | Symbol: None | 20S proteasome alpha subunit E2 (PAE2), identical to 20S proteasome subunit PAE2 GB:AAC32061 2008-04-11
Genome Context View View with CoGe 1 AT1G53850.1 1261071 1265898 | Symbol: None | 20S proteasome alpha subunit E1 (PAE1), identical to 20S proteasome subunit PAE1 GI:3421087 2008-04-11
Genome Context View View with CoGe 1 AT5G20090.1 1347828 1349932 | Symbol: None | expressed protein, contains Pfam domain, PF03650: Uncharacterized protein family (UPF0041) 2008-04-11
Genome Context View View with CoGe 1 AT1G68010.1 1423188 1427512 | Symbol: None | glycerate dehydrogenase / NADH-dependent hydroxypyruvate reductase, identical to hydroxypyruvate 2008-04-11
Genome Context View View with CoGe 1 AT3G51370.1 1525970 1530722 | Symbol: None | protein phosphatase 2C, putative / PP2C, putative, similar to Ser/Thr protein phosphatase 2008-04-11
Genome Context View View with CoGe 1 AT4G38510.1 1550614 1557435 | Symbol: None | vacuolar ATP synthase subunit B, putative / V-ATPase B subunit, putative / vacuolar 2008-04-11
Genome Context View View with CoGe 1 AT1G20260.1 1550632 1555654 | Symbol: None | vacuolar ATP synthase subunit B, putative / V-ATPase B subunit, putative / vacuolar 2008-04-11
Genome Context View View with CoGe 1 AT1G76030.1 1550636 1557435 | Symbol: None | vacuolar ATP synthase subunit B / V-ATPase B subunit / vacuolar proton pump B subunit 2008-04-11
Genome Context View View with CoGe 1 AT5G20090.1 1743915 1747543 | Symbol: None | expressed protein, contains Pfam domain, PF03650: Uncharacterized protein family (UPF0041) 2008-04-11
Genome Context View View with CoGe 1 AC202344_11.1 1852194 1855428 Prefoldin alpha subunit AC202344.9 53595-55446 E EGN_Mt071002 20080227 2008-04-11
Genome Context View View with CoGe 1 AT5G23290.1 1852209 1854146 | Symbol: None | c-myc binding protein, putative / prefoldin, putative, similar to Swiss-Prot:Q99471 2008-04-11
Genome Context View View with CoGe 1 AT2G29690.1 1855993 1861604 | Symbol: None | anthranilate synthase, alpha subunit, component I-2 (ASA2), identical to SP:P32069 | 2008-04-11
Genome Context View View with CoGe 1 AC202344_14.1 1856034 1858231 Anthranilate synthase component I and chorismate binding protein AC202344.9 63191-59475 E EGN_Mt071002 2008-04-11
Genome Context View View with CoGe 1 AC202344_15.1 1857933 1861564 Anthranilate synthase component I AC202344.9 66465-63193 E EGN_Mt071002 20080227 2008-04-11
Genome Context View View with CoGe 1 AC202344_17.1 1864778 1870358 Dihydroorotate dehydrogenase 2 AC202344.9 71376-77088 E EGN_Mt071002 20080227 2008-04-11
Genome Context View View with CoGe 1 AT5G23300.1 1865151 1870358 | Symbol: None | dihydroorotate dehydrogenase, mitochondrial / dihydroorotate oxidase / DHOdehase (PYRD), 2008-04-11
Genome Context View View with CoGe 1 AT3G19960.1 1874058 1886842 | Symbol: None | myosin (ATM), nearly identical to myosin (Arabidopsis thaliana) GI:6491702; similar 2008-04-11
Genome Context View View with CoGe 1 AC202344_9.1 1874130 1879340 Myosin head, motor region AC202344.9 45089-39537 H EGN_Mt071002 20080227 2008-04-11
Genome Context View View with CoGe 1 AC202344_8.1 1878000 1886847 IQ calmodulin-binding region; Myosin head, motor region AC202344.9 39535-33179 H EGN_Mt071002 20080227 2008-04-11
Genome Context View View with CoGe 1 CU326394_22.1 1980549 1982075 hypothetical protein CU326394.2 117878-118261 E EGN_Mt071002 20080227 2008-04-11
Genome Context View View with CoGe 1 CU326388_5.1 2016310 2018006 Probable NADP-dependent oxidoreductase P1. CU326388.1 12330-12031 H EGN_Mt071002 20080227 2008-04-11
Genome Context View View with CoGe 1 AC202358_18.1 2128455 2136343 Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase AC202358.6 149121-142272 2008-04-11
Genome Context View View with CoGe 1 AT3G19980.1 2128455 2136343 | Symbol: EMB2736 | serine/threonine protein phosphatase (STPP), identical to serine/threonine protein 2008-04-11
Genome Context View View with CoGe 1 AT1G50370.1 2128455 2136343 | Symbol: None | serine/threonine protein phosphatase, putative, nearly identical to serine/threonine 2008-04-11
Genome Context View View with CoGe 1 AT3G55400.1 2162111 2170334 | Symbol: None | methionyl-tRNA synthetase / methionine--tRNA ligase / MetRS (cpMetRS), identical to 2008-04-11
Genome Context View View with CoGe 1 AT3G09900.1 2208110 2211888 | Symbol: None | Ras-related GTP-binding protein, putative, similar to GTP-binding protein GI:871510 2008-04-11
Genome Context View View with CoGe 1 AT3G53610.1 2208110 2212106 | Symbol: None | Ras-related GTP-binding protein, putative, similar to Ras-related protein ARA-3 SP:P28186 2008-04-11
Genome Context View View with CoGe 1 AT5G03520.1 2208110 2211888 | Symbol: None | Ras-related GTP-binding protein, putative, similar to GTP-binding protein GI:871508 2008-04-11
Genome Context View View with CoGe 1 AT3G46060.1 2208110 2211943 | Symbol: None | Ras-related protein (ARA-3) / small GTP-binding protein, putative, identical to SP:P28186 2008-04-11
Genome Context View View with CoGe 1 AT5G59840.1 2208110 2212106 | Symbol: None | Ras-related GTP-binding family protein, contains Pfam profile: PF00071 Ras family | 2008-04-11
Genome Context View View with CoGe 1 AT5G65750.1 2215829 2221861 | Symbol: None | 2-oxoglutarate dehydrogenase E1 component, putative / oxoglutarate decarboxylase, putative 2008-04-11
Genome Context View View with CoGe 1 AT3G55410.1 2215829 2221861 | Symbol: None | 2-oxoglutarate dehydrogenase E1 component, putative / oxoglutarate decarboxylase, putative 2008-04-11
Genome Context View View with CoGe 1 AT4G01470.1 2272381 2281113 | Symbol: TIP1;3 | major intrinsic family protein / MIP family protein, contains Pfam profile: MIP PF00230 2008-04-11
Genome Context View View with CoGe 1 AT1G15690.1 2317346 2322487 | Symbol: None | pyrophosphate-energized vacuolar membrane proton pump / pyrophosphate-energized inorganic 2008-04-11
Genome Context View View with CoGe 1 AT5G26860.1 2374267 2386255 | Symbol: None | similar to Lon protease, putative [Arabidopsis thaliana] (TAIR:At3g05790.1); similar 2008-04-11
Genome Context View View with CoGe 1 AT3G05820.1 2634933 2639516 | Symbol: None | beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, 2008-04-11
Genome Context View View with CoGe 1 AT1G56560.1 2634936 2639570 | Symbol: None | beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, 2008-04-11
Genome Context View View with CoGe 1 AT1G09330.1 2682802 2686564 | Symbol: None | expressed protein, contains 3 transmembrane domains; contains Pfam profile PF05832: 2008-04-11
Genome Context View View with CoGe 1 AT2G47180.1 2704187 2707114 | Symbol: None | galactinol synthase, putative, similar to galactinol synthase, isoform GolS-1 GI:5608497 2008-04-11
Genome Context View View with CoGe 1 AT1G56600.1 2704211 2707114 | Symbol: None | galactinol synthase, putative, similar to galactinol synthase, isoform GolS-1 GI:5608497 2008-04-11
Genome Context View View with CoGe 1 AT1G09350.1 2704230 2707119 | Symbol: None | galactinol synthase, putative, contains Pfam profile: PF01501 glycosyl transferase family 2008-04-11
Genome Context View View with CoGe 1 AT5G02270.1 2709585 2713525 | Symbol: None | ABC transporter family protein, NBD-like protein POP, Arabidopsis thaliana, EMBL:AF127664 2008-04-11
Genome Context View View with CoGe 1 AT5G14670.1 2714332 2718252 | Symbol: ATARFA1B | Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor DcARF1 2008-04-11
Genome Context View View with CoGe 1 AT2G47170.1 2714490 2718252 | Symbol: None | Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. 2008-04-11
Genome Context View View with CoGe 1 AT1G23490.1 2714490 2718252 | Symbol: ATARF | Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. 2008-04-11
Genome Context View View with CoGe 1 AT1G10630.1 2714490 2718252 | Symbol: None | Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. 2008-04-11
Genome Context View View with CoGe 1 AT3G62290.1 2714490 2718252 | Symbol: None | Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. 2008-04-11
Genome Context View View with CoGe 1 AT1G70490.1 2714490 2718252 | Symbol: None | Gene encoding ADP-ribosylation factor and similar to other ARFs and ARF-like proteins. 2008-04-11
Genome Context View View with CoGe 1 AT5G14640.1 2774160 2778813 | Symbol: None | protein kinase family protein, similar to glycogen synthase kinase-3 homolog MsK-3 SP:P51139 2008-04-11
Genome Context View View with CoGe 1 AT5G26751.1 2774160 2778813 | Symbol: None | shaggy-related protein kinase alpha / ASK-alpha (ASK1), identical to shaggy-related 2008-04-11
Genome Context View View with CoGe 1 AT3G05840.1 2774160 2778813 | Symbol: None | shaggy-related protein kinase gamma / ASK-gamma (ASK3), identical to shaggy-related 2008-04-11
Genome Context View View with CoGe 1 AT1G56720.1 2812146 2816721 | Symbol: None | protein kinase family protein, contains protein kinase domain, Pfam:PF00069 | chr1:21267085-21269285 2008-04-11
Genome Context View View with CoGe 1 AT1G09440.1 2812165 2816720 | Symbol: None | protein kinase family protein, contains protein kinase domain, Pfam:PF00069 | chr1:3045515-3047395 2008-04-11
Genome Context View View with CoGe 1 AT1G57540.1 2883099 2886040 | Symbol: None | expressed protein, contains similarity to T-box domain GI:5931592 from (Cynops pyrrhogaster) 2008-04-11
Genome Context View View with CoGe 1 AT3G05870.1 2986858 2988432 | Symbol: None | zinc finger (C3HC4-type RING finger) family protein, contains Pfam profile: PF00097 2008-04-11
Genome Context View View with CoGe 1 AT1G57540.1 3054224 3057172 | Symbol: None | expressed protein, contains similarity to T-box domain GI:5931592 from (Cynops pyrrhogaster) 2008-04-11
Genome Context View View with CoGe 1 AC191602_19.1 3128232 3129837 helicase-like protein AC191602.2 114383-114177 H EGN_Mt071002 20080227 2008-04-11
Genome Context View View with CoGe 1 AT1G09570.1 3222158 3227127 | Symbol: None | phytochrome A (PHYA), identical to SP:P14712 Phytochrome A {Arabidopsis thaliana} | 2008-04-11
Genome Context View View with CoGe 1 AT3G05940.1 3282767 3287297 | Symbol: None | expressed protein, contains Pfam profile PF03619: Domain of unknown function | chr3:1777370-1779654 2008-04-11
Genome Context View View with CoGe 1 AC202494_25.1 3311716 3314695 CENP-B protein; Homeodomain-like AC202494.4 75017-76830 E EGN_Mt071002 20080227 2008-04-11
Genome Context View View with CoGe 1 AC199763_11.1 3311753 3314717 CENP-B protein; Homeodomain-like AC199763.1 54094-52255 E EGN_Mt071002 20080227 2008-04-11
Genome Context View View with CoGe 1 AC202491_14.1 3312680 3314522 CENP-B protein; Homeodomain-like AC202491.2 76581-77024 H EGN_Mt071002 20080227 2008-04-11
Genome Context View View with CoGe 1 AC203556_16.1 3312971 3314645 Homeodomain-like AC203556.1 51337-51612 H EGN_Mt071002 20080227 2008-04-11
Genome Context View View with CoGe 1 AT3G62010.1 3337461 3353424 | Symbol: None | expressed protein | chr3:22975652-22982754 FORWARD | Aliases: F21F14.180 2008-04-11
Genome Context View View with CoGe 1 AT2G05620.1 4449020 4451503 | Symbol: None | expressed protein | chr2:2081050-2081837 REVERSE | Aliases: T20G20.3, T20G20_3 2008-04-11
Genome Context View View with CoGe 1 AT3G04400.1 4615868 4621179 | Symbol: EMB2171 | 60S ribosomal protein L23 (RPL23C), similar to ribosomal protein L17 GB:AAA34113.1 2008-04-11
Genome Context View View with CoGe 1 AT2G33370.1 4615868 4621179 | Symbol: None | 60S ribosomal protein L23 (RPL23B) | chr2:14150646-14151797 REVERSE | Aliases: F4P9.14 2008-04-11
Genome Context View View with CoGe 1 AT1G04480.1 4615868 4621179 | Symbol: None | 60S ribosomal protein L23 (RPL23A), identical to GB:AAB80655 | chr1:1216094-1217457 2008-04-11
Genome Context View View with CoGe 1 AT1G05150.1 4857602 4861068 | Symbol: None | calcium-binding EF hand family protein, low similarity to O-linked GlcNAc transferase 2008-04-11
Genome Context View View with CoGe 1 AT4G30220.1 4911200 4913096 | Symbol: None | small nuclear ribonucleoprotein F, putative / snRNP-F, putative / Sm protein F, putative, 2008-04-11
Genome Context View View with CoGe 1 AT2G28740.1 4965186 4966897 | Symbol: None | histone H4, identical to histone H4 from Lycopersicon esculentum GI:297150, Lolium temulentum 2008-04-11
Genome Context View View with CoGe 1 AT3G45930.1 4965186 4966897 | Symbol: None | histone H4, identical to histone H4 from Lycopersicon esculentum GI:297150, Lolium temulentum 2008-04-11
Genome Context View View with CoGe 1 AT3G46320.1 4965186 4966897 | Symbol: None | histone H4, nearly identical to histone H4 (Arabidopsis thaliana) GI:166740 | chr3:17030897-17031413 2008-04-11
Genome Context View View with CoGe 1 AT3G53730.1 4965186 4966897 | Symbol: None | histone H4, identical to histone H4 from Lycopersicon esculentum GI:297150, Lolium temulentum 2008-04-11
Genome Context View View with CoGe 1 AT1G07820.1 4965186 4966897 | Symbol: None | histone H4, identical to histone H4 from Lycopersicon esculentum GI:297150, Lolium temulentum 2008-04-11
Genome Context View View with CoGe 1 AT1G07660.1 4965186 4966897 | Symbol: None | histone H4, identical to histone H4 from Lycopersicon esculentum GI:297150, Lolium temulentum 2008-04-11
Genome Context View View with CoGe 1 AT5G59690.1 4965186 4966897 | Symbol: None | histone H4, identical to histone H4 from Lycopersicon esculentum GI:297150, Lolium temulentum 2008-04-11

Database lookup time: 0.0024139881134033 sec

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