<h2>SRGD</h2>

Gene Groups

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Lotus japonicus (Lj)

4.5 Related to spliceosome

CIWOG

Lj

Pp

Zm

Os

Sb

Gm

Mt

At

Vv

Pt

28LjSGA_015054.2 jgi|Phypa1_1|169406|estExt_fgenesh1_pg.C_2070055 jgi|Phypa1_1|198566|estExt_gwp_gw1.C_3320014 AC233901.1_FGP001 GRMZM2G071589 GRMZM2G076597 LOC_Os03g05830 LOC_Os10g30370 jgi|Sorbi1|4998860|estExt_fgenesh1_pg.C_chr_14800 jgi|Sorbi1|5048823|Sb01g021020 Glyma05g32080 Glyma06g15370 Glyma08g15370 Glyma10g42890 Glyma20g24130 IMGA|AC137522_14.2 IMGA|CU041253_29.2 AT2G16940 AT5G09880 GSVIVP00019345001 GSVIVP00036145001 gw1.VII.7.1_215702 grail3.0045020701_648812 estExt_Genewise1_v1.C_LG_V4376_716366
34LjSGA_002278.2 chr1.CM0141.280.nc jgi|Phypa1_1|31719|gw1.36.181.1 GRMZM2G084540 GRMZM2G126120 LOC_Os03g25970 jgi|Sorbi1|4777097|e_gw1.1.15449.1 Glyma09g37070 Glyma13g05520 Glyma18g49600 Glyma19g02840 IMGA|AC122724_34.2 IMGA|AC148485_39.2 AT5G15270 GSVIVP00020994001 gw1.IV.88.1_194999 fgenesh4_pg.C_LG_XVII000411_778532
71LjSGA_014745.1 LjSGA_021297.1 jgi|Phypa1_1|161416|estExt_fgenesh1_pg.C_320174 jgi|Phypa1_1|56617|fgenesh1_pm.scaffold_40000018 GRMZM2G151614 GRMZM2G173777 LOC_Os02g07070 jgi|Sorbi1|4873923|estExt_Genewise1Plus.C_chr_22424 jgi|Sorbi1|5053632|Sb03g033240 Glyma08g35510 Glyma16g18030 AT3G54230 GSVIVP00015806001 gw1.44.326.1_289113 fgenesh4_pm.C_LG_IV000284_800597
76chr1.LjT38H23.70.nd jgi|Phypa1_1|154562|e_gw1.430.3.1 AC212390.3_FGP005 GRMZM2G000749 GRMZM2G118917 LOC_Os03g06190 LOC_Os10g30100 jgi|Sorbi1|4869475|estExt_Genewise1Plus.C_chr_14741 jgi|Sorbi1|5050166|Sb01g046585 Glyma17g24130 Glyma19g29260 IMGA|AC148965_27.2 IMGA|AC148965_33.2 AT1G54440 AT5G35910 GSVIVP00003820001 gw1.XIII.2130.1_241881 gw1.XIX.1151.1_248751
79LjSGA_079569.1 jgi|Phypa1_1|171035|estExt_fgenesh1_pg.C_2710053 jgi|Phypa1_1|233549|estExt_fgenesh2_pg.C_890063 GRMZM2G113139 GRMZM2G151387 LOC_Os03g26630 jgi|Sorbi1|4997991|estExt_fgenesh1_pg.C_chr_13449 Glyma11g36120 Glyma18g02310 IMGA|AC141115_31.2 IMGA|AC202494_17.1 IMGA|CT971488_1.2 AT4G39680 GSVIVP00015280001 GSVIVP00019432001 eugene3.00050196_558581 estExt_Genewise1_v1.C_LG_VII1973_718854
99chr1.CM0195.50.nd jgi|Phypa1_1|64922|fgenesh1_pg.scaffold_4000037 GRMZM2G018697 LOC_Os01g62040 LOC_Os07g08170 jgi|Sorbi1|4753872|estExt_Genewise1.C_chr_39736 jgi|Sorbi1|4881914|estExt_Genewise1Plus.C_chr_40472 Glyma07g02170 Glyma08g21830 IMGA|AC138464_44.2 IMGA|AC174343_6.2 AT5G22330 GSVIVP00024530001 gw1.66.399.1_293726 eugene3.00090095_556835
106chr3.LjT10E18.50.nc jgi|Phypa1_1|226768|estExt_Genewise1.C_3760042 GRMZM2G132000 LOC_Os02g41820 LOC_Os11g04880 jgi|Sorbi1|4758943|estExt_Genewise1.C_chr_50582 jgi|Sorbi1|5038667|Sb04g026620 jgi|Sorbi1|5059228|Sb08g001090 Glyma13g29290 Glyma15g09800 IMGA|AC146705_49.2 AT3G45180 AT5G42300 eugene3.00080332_563737 grail3.0066020701_680026 estExt_Genewise1_v1.C_LG_X2660_724996
116chr4.CM0042.2090.nc jgi|Phypa1_1|159747|estExt_fgenesh1_pg.C_150112 jgi|Phypa1_1|223462|estExt_Genewise1.C_2590023 jgi|Phypa1_1|224024|estExt_Genewise1.C_2760003 GRMZM2G038032 GRMZM2G040477 LOC_Os01g49290 jgi|Sorbi1|4768872|estExt_Genewise1.C_chr_97531 jgi|Sorbi1|4879632|estExt_Genewise1Plus.C_chr_38217 Glyma05g34070 Glyma08g05610 IMGA|AC150743_39.2 AT1G18080 AT1G48630 AT3G18130 GSVIVP00017791001 eugene3.00150364_574969 estExt_fgenesh4_pm.C_LG_XII0164_834267
117LjSGA_024145.1 GRMZM2G055251 GRMZM2G094879 LOC_Os02g49530 jgi|Sorbi1|4884071|estExt_Genewise1Plus.C_chr_47695 jgi|Sorbi1|5054529|Sb04g000960 Glyma07g00450 Glyma08g23980 AT1G16810 grail3.0106002601_660030
147LjSGA_052045.1 jgi|Phypa1_1|189716|estExt_gwp_gw1.C_1360127 jgi|Phypa1_1|205972|estExt_Genewise1.C_310051 GRMZM2G037683 GRMZM2G139363 LOC_Os01g21940 jgi|Sorbi1|5001869|estExt_fgenesh1_pg.C_chr_31420 Glyma05g30430 Glyma08g13560 IMGA|AC142394_45.2 IMGA|AC147435_58.2 AT1G73720 GSVIVP00016018001 estExt_fgenesh4_pg.C_LG_XI1348_823135
163chr3.LjT46L11.80.nc jgi|Phypa1_1|111812|e_gw1.2.614.1 GRMZM2G384327 LOC_Os09g10930 jgi|Sorbi1|4794909|e_gw1.2.20313.1 Glyma08g16200 Glyma15g42690 AT3G52120 GSVIVP00008843001 gw1.I.1893.1_173293 estExt_fgenesh4_pg.C_LG_IX0951_821392
172LjT48C01.160.nd LjT48C01.170.nd jgi|Phypa1_1|164611|estExt_fgenesh1_pg.C_730012 GRMZM2G404377 LOC_Os11g05394 LOC_Os12g15420 jgi|Sorbi1|143426|estExt_fgenesh1_pm.C_chr_30847 Glyma08g41440 Glyma13g24660 Glyma18g14770 IMGA|AC186676_9.2 AT1G80930 GSVIVP00036713001 eugene3.00161151_577016
180LjSGA_071984.1 chr6.LjT30N23.70.nd jgi|Phypa1_1|170668|estExt_fgenesh1_pg.C_2550039 jgi|Phypa1_1|61580|fgenesh1_pm.scaffold_402000007 AC194970.5_FGP009 LOC_Os06g08770 jgi|Sorbi1|5051906|Sb02g037530 Glyma08g45090 Glyma18g07830 IMGA|CT009558_1.2 AT3G49830 AT5G67630 GSVIVP00010591001 gw1.XVI.3066.1_257127 gw1.28.905.1_282331
204LjSGA_085754.1 jgi|Phypa1_1|108061|estExt_fgenesh1_pm.C_2200004 jgi|Phypa1_1|196206|estExt_gwp_gw1.C_2580008 GRMZM2G171232 LOC_Os03g17170 jgi|Sorbi1|5049686|Sb01g039130 Glyma13g32150 Glyma15g07150 AT1G61620 GSVIVP00005291001 GSVIVP00011001001 eugene3.00110341_568327 fgenesh4_pm.C_LG_IV000045_800358 estExt_fgenesh4_pg.C_24050001_829094
208chr1.CM0088.900.nc jgi|Phypa1_1|187995|estExt_gwp_gw1.C_1140075 GRMZM2G373653 LOC_Os02g19804 jgi|Sorbi1|4882757|estExt_Genewise1Plus.C_chr_42202 Glyma03g02920 Glyma05g37520 IMGA|AC126016_11.2 IMGA|AC145329_30.2 AT1G01350 AT5G06420 estExt_Genewise1_v1.C_LG_XIV1660_731318
210LjSGA_009527.1 LjSGA_077056.1 jgi|Phypa1_1|159630|estExt_fgenesh1_pg.C_140117 AC217271.3_FGP002 LOC_Os02g17870 jgi|Sorbi1|4758952|estExt_Genewise1.C_chr_50594 Glyma05g28420 Glyma08g11430 IMGA|AC146585_7.2 AT4G08580 AT5G17900 GSVIVP00031419001 fgenesh4_pm.C_LG_XIX000122_809557 estExt_fgenesh4_pm.C_LG_XIII0270_834576
214chr1.CM0496.70.nd GRMZM2G104047 GRMZM2G116592 LOC_Os01g46710 jgi|Sorbi1|5053445|Sb03g029860 Glyma04g41520 Glyma06g13300 IMGA|CR974443_32.2 AT5G53440 GSVIVP00006751001 GSVIVP00037112001 eugene3.00150157_574762 grail3.0031015701_661509
217LjSGA_018392.1 jgi|Phypa1_1|171742|estExt_fgenesh1_pg.C_3090029 GRMZM2G131482 LOC_Os06g29400 jgi|Sorbi1|5061717|Sb10g014430 Glyma05g07740 Glyma17g13270 IMGA|AC137819_27.2 AT5G23080 GSVIVP00017597001 eugene3.00120492_569839
222chr1.CM0361.390.nc chr5.CM0571.170.nd GRMZM2G026614 LOC_Os07g06450 jgi|Sorbi1|5050564|Sb02g003310 Glyma03g36130 Glyma19g38790 IMGA|AC202362_16.1 AT3G52380 GSVIVP00003533001 gw1.VI.797.1_416424 eugene3.00160616_576481
233LjSGA_081380.1 jgi|Phypa1_1|149326|e_gw1.294.23.1 GRMZM2G086236 LOC_Os01g40610 jgi|Sorbi1|4879012|estExt_Genewise1Plus.C_chr_37003 Glyma13g33280 Glyma15g39810 IMGA|AC157535_30.2 AT1G17130 GSVIVP00010394001 estExt_Genewise1_v1.C_LG_XI3018_728081
234chr5.LjT42F22.120.nc jgi|Phypa1_1|60909|fgenesh1_pm.scaffold_299000002 GRMZM2G414496 LOC_Os07g08729 jgi|Sorbi1|4873020|estExt_Genewise1Plus.C_chr_20058 jgi|Sorbi1|5032669|Sb02g004740 Glyma20g39280 IMGA|AC149471_38.2 AT1G16970 GSVIVP00033559001 gw1.XI.3477.1_235497
240chr4.CM0042.1800.nd jgi|Phypa1_1|61696|fgenesh1_pm.scaffold_427000004 GRMZM2G120784 LOC_Os02g33860 jgi|Sorbi1|144443|estExt_fgenesh1_pm.C_chr_40509 Glyma05g32110 Glyma08g15400 IMGA|AC148821_34.2 IMGA|AC203549_20.1 AT5G64730 GSVIVP00034114001 estExt_fgenesh4_pg.C_LG_I2540_815667
242chr5.LjT39E05.240.nd jgi|Phypa1_1|25801|gw1.8.103.1 GRMZM2G176499 LOC_Os03g04400 jgi|Sorbi1|4872539|estExt_Genewise1Plus.C_chr_111861 Glyma10g42950 Glyma20g24050 AT5G23590 GSVIVP00038614001 eugene3.00090311_557051
259LjT10F13.180.nd jgi|Phypa1_1|20465|gw1.17.31.1 GRMZM2G048819 LOC_Os07g32890 jgi|Sorbi1|5051739|Sb02g034580 Glyma06g46220 Glyma12g10530 AT2G32415 GSVIVP00025875001 gw1.II.581.1_409246 fgenesh4_pg.C_LG_II002083_755903
261chr6.CM0013.200.nd jgi|Phypa1_1|197602|estExt_gwp_gw1.C_3000034 GRMZM2G015592 LOC_Os11g04950 LOC_Os12g04940 jgi|Sorbi1|4765210|estExt_Genewise1.C_chr_80204 jgi|Sorbi1|5005279|estExt_fgenesh1_pg.C_chr_50304 Glyma09g08650 Glyma15g20260 AT2G26460 GSVIVP00016370001 fgenesh4_pg.C_LG_XVIII000028_778660
270LjSGA_016052.1 jgi|Phypa1_1|196982|estExt_gwp_gw1.C_2800025 GRMZM2G072156 LOC_Os03g58590 jgi|Sorbi1|123104|fgenesh1_pm.C_chr_1000158 Glyma03g34590 Glyma13g21200 Glyma19g37280 IMGA|AC174301_41.2 AT1G03910 GSVIVP00000554001 eugene3.00280272_589536
297LjSGA_040056.1 GRMZM2G149138 LOC_Os06g30020 jgi|Sorbi1|5055275|Sb04g023010 Glyma19g05440 AT1G67210 AT5G38600 GSVIVP00038161001 gw1.123.141.1_266119 fgenesh4_pg.C_LG_IV000890_759262
302chr5.CM0095.210.nd jgi|Phypa1_1|57686|fgenesh1_pm.scaffold_74000006 GRMZM2G102964 LOC_Os08g08080 jgi|Sorbi1|5061237|Sb10g002430 Glyma07g07730 AT1G31870 GSVIVP00015807001 gw1.118.149.1_264661
356chr4.CM0025.150.nd Glyma05g37050 Glyma08g02510 AT1G64330 AT5G41790 GSVIVP00002458001 eugene3.00031098_554465 grail3.0008039601_640386

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