<h2>SRGD</h2>

Gene Groups

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Arabidopsis thaliana (At)

1. Small nuclear Ribonucleoprotein (snRNP)

Group

CIWOG

Gene

hHomologs

SeHomologs

Gene Name

Chr

str

from

to

Txn

Domains

Transcripts

1.1108AT2G47640.1SmD2atSmD2-a2f1953717819538624 Sm 1
1.1108AT3G62840.1SmD2atSmD2-b3r2323549023236816 Sm 1
1.1147AT3G07590.1SmD1SmD1atSmD1-a3f24230852424166 Sm 1
1.1147AT4G02840.1SmD1SmD1atSmD1-b4f12646271266486 Sm 1
1.1181AT2G18740.1SmESmEatSmE-b2f81232218125004 Sm 1
1.1181AT4G30330.1SmESmEatSmE-a4r1483654814838020 Sm 1
1.1221AT5G27720.1LSM4LSm4atLSM45f98155569817599 Sm 1
1.1336AT4G20440.1SmBSmB1atSmB-b4r1102214211023752 Sm 1
1.1336AT5G44500.1SmBSmB1atSmB-a5f1792745317929463 Sm 1
1.1344AT1G20580.1SmD3SmD3atSmD3-b1f71288847130642 Sm 1
1.1469AT2G23930.1SmGSmGatSmG-a2f1018225110183240 Sm 1
1.1469AT3G11500.1SmGSmGatSmG-b3r36214093622606 Sm 1
1.1472AT2G03870.1LSM7LSm7atLSM72f11802171181437 Sm 1
1.1479AT1G03330.1LSM2LSm2atLSM21r817983819563 Sm 1
1.1539AT5G48870.1LSM5LSm5atLSM5/SAD15f1981333819814554 Sm 1
1.1540AT4G30220.1SmFSmFatSmF4r1480295014804323 Sm 1
1.1545AT3G14080.1LSM1LSm1atLSM1b3f46673654669194 Sm 1
1.1548AT2G43810.1LSM6LSm6atLSM6b2f1814931118151295 Sm 1
1.1548AT3G59810.1LSM6LSm6atLSM6a3f2209651522097908 Sm 1
1.1550AT1G65700.1LSM8LSm8atLSM81r2443423624436287 Sm 1
1.1561AT1G21190.1LSM3LSm3atLSM3a1r74196787420903 Sm 1
1.1561AT1G76860.1LSM3LSm3atLSM3b1r2885441428855750 Sm 1
1.292AT3G03340.1Luc7atLuc7a3f786320790077 DUF259 1
1.292AT5G17440.1Luc7atLuc7b5f57497625753643 DUF259 1
1.2208AT1G04080.1Prp39atPrp39a1f10513431056751 HAT 7; TPR-like 1
1.2403AT3G50670.1U1-70KSnp1atU1-70K3r1882630018829618 RRM 1
1.2463AT4G03120.1U1C_SubunitYhc1atU1C4f13856601387739 C2H2 1; mrCtermi 3
1.2475AT1G44910.1FBP11Prp40atPrp40a1f1697560416982965 WW 2; FF 5
1.2538AT5G51410.1Related_to_Luc7-likeLuc7atLuc7-rl5r2088136720883704 DUF259 1
1.2981AT2G47580.1U1A_SubunitMud1atU1A2f1951718719518871 RRM 2
1.21097AT5G46400.1Prp39atPrp39b5f1882003218824650 HAT 4
1.3170AT1G14640.1SF3a120/SAP114_SubunPrp21patSAP114-1b1f50236565025955 SWAP/Surp 2
1.3170AT1G14650.1SF3a120/SAP114_SubunPrp21patSAP114-1a1f50276625030792 SWAP/Surp 2
1.3203AT5G64270.1SF3b160/SAP155_SubunHsh155atSAP1555f2570665925710925 HEAT 1; ARM 2; SAP
1.3222AT4G21660.1SF3b150/SAP145_SubunCus1patSF3b1504r1150596111509841 PSP 1; DUF382 1
1.3228AT1G07170.1SF3b_14b/PHP5ARds3pSF3b_14b/PHP5A-a1f22001342201146 UPF0123 1
1.3228AT2G30000.1SF3b_14b/PHP5ARds3pSF3b_14b/PHP5A-b2r1280385312804977 UPF0123 1
1.3256AT3G55200.1SF3b120/SAP130_SubunRse1patSAP130a3f2046053320464556 CPSF_A 1; WD40-like
1.3256AT3G55220.1SF3b120/SAP130_SubunRse1patSAP130b3r2046692120470944 CPSF_A 1; WD40-like
1.3347AT1G06960.1U2B''_SubunitMsl1patU2B''a1f21358522137702 RRM 2
1.3347AT2G30260.1U2B''_SubunitMsl1patU2B''b2r1290540212907509 RRM 2
1.3412AT1G09760.1U2A'_SubunitLea1patU2A1r31591253161692 LRR 4
1.3460AT5G12190.1p14Snu17patP14-15r39405323941205 RRM 1
1.3461AT5G06160.1p14Snu17patSAP615r18623691866433 C2H2 1
1.3466AT3G23325.1SF3b_10SF3b10b3f83457718347062 SF3b10 1
1.3466AT4G14342.1SF3b_10SF3b10a4r82535508255508 SF3b10 1
1.3470AT2G18510.1SF3b53/SAP49_SubunitHsh49patSAP49a2r80311828033619 RRM 2
1.3758AT2G32600.1SF3a66/SAP62_SubunitPrp11patSAP622r1383354513835663 C2H2 1
1.444AT1G56070.1116kD_Subunit/elongaSnu114patU5-116-21r2096793020971742 EFG_C 1; GTP_EFTU
1.475AT1G20960.1200kD_Subunit/HelicaBrr2patU5-200-2a1r73017487310213 DEAD 1; Helicase_C
1.475AT2G42270.1200kD_Subunit/HelicaBrr2patU5-200-2b2f1760433017611333 DEAD 1; Helicase_C
1.475AT5G61140.1200kD_Subunit/HelicaBrr2patU5-200-15f2458999924603514 DEAD 1; Helicase_C
1.4182AT1G80070.1220kD_SubunitPrp8patU5-220/Prp8a1f3011805230127811 Mov34 1
1.4182AT4G38780.1220kD_SubunitPrp8patU5-220/Prp8b1f3011805230127811 Mov34 1
1.4259AT2G33730.1100kD_SubunitPrp28patU5-100KD2r1426545014267972 DEAD 1; Helicase_C
1.4402AT4G03430.1102KD/Prp6-likePrp6patU5-102KD4r15171341520563 Ubiquitin 1; TPR 3
1.4405AT3G22980.1116kD_Subunit/elongaSnu114patU5-116-33r81601568163316 EFG_C 1; GTP_EFTU
1.4413AT1G06220.1116kD_Subunit/elongaSnu114patU5-116-1a1f18999641904873 EFG_C 1; GTP_EFTU 1
1.4413AT5G25230.1116kD_Subunit/elongaSnu114patU5-116-1b5f87397098743594 EFG_C 1; GTP_EFTU 1
1.4637AT5G08290.115kD_SubunitDib1patU5-155f26659762667155 DIMI 1; Thioredoxin
1.4755AT2G43770.140kD_SubunitatU5-402r1813406118136001 WD-40 7
1.41099AT3G27730.1200kD_Subunit/HelicaBrr2patU5-200-33r1027380110280362 DEAD 1; Sec63 1; Ru
1.5223AT4G12600.1U4/U6-15.5KSnu13patTri15.5-1b4f74532027454481 Ribosomal_L7Ae 1
1.5223AT4G22380.1U4/U6-15.5KSnu13patTri15.5-1c4r1181175011813000 Ribosomal_L7Ae 1
1.5223AT5G20160.1U4/U6-15.5KSnu13patTri15.5-1a5r68037826805201 Ribosomal_L7Ae 1
1.5260AT1G60170.1U4/U6-61KDPrp31atU5-61/Prp31a1f2219277322195400 Nop 1
1.5411AT1G28060.1U4/U6-90K/SAP90Prp3patSAP90-11f97791389782700
1.5756AT2G41500.1U4/U6-60K/SAP60Prp4patSAP602r1730413017307426 WD-40 7;SFM 1;WD40
1.6399AT5G16780.1Tri-110KDSAD1atTri1105r55174905522258 SART-1 1
1.6633AT5G57370.1(U4/U6.U5)Tri-27kD/RY1atTri-27kD/RY15f2324473423246420
1.6638AT4G22350.1Tri-65_KDSnu66patTri65a4r1180383411807178 UCH 1; ZnF_UBP 1
1.6753AT3G05760.1hSnu23/FLJ31121Snu23patSnu233f17079001710038 ZnF_U1 1
1.7225AT3G07860.1U11/U12-25K(-99_protein)atU11/U12-25K3f25078802509509 C2H2 1
1.7346AT1G09230.1U11/U12-65KatU11/U12-65K1r29795202982624 RRM 2;PHOSPHOPANTET
1.7982AT2G43370.1U11/U12-35KatU11/U12-35kD2f1801337018015454 RRM 1
1.71101AT3G10400.1U11/U12-31K(MADP1)atU11/U12-31K3f32326083233685 RRM 1; CCHC 1

2. Splicing factors

Group

CIWOG

Gene

hHomologs

SeHomologs

Gene Name

Chr

str

from

to

Txn

Domains

Transcripts

2.149AT1G27650.1U2AF35atU2AF35a/AUSa1f96145519616357 RRM 1; CCHC 2;
2.149AT5G42820.1U2AF35atU2AF35/AUSb5r1717021217171704 RRM 1; CCHC 2;
2.155AT1G60900.1U2AF65atU2AF65b/AULa1f2242390922428022 RRM 3;
2.1`AT4G36690.1U2AF65atU2AF65a/AULb4r1729399217297722 RRM 3;
2.172AT3G01150.1PTB/hnRNP_IatPTB2a3f5158354506 RRM 2
2.172AT5G53180.1PTB/hnRNP_IatPTB2b5r2156820021571894 RRM 2
2.1169AT1G43190.1PTB/hnRNP_IatPTB11r1627510816278624 RRM 4
2.1398AT5G51300.1SF1/BBPatSF1/BBP5r2084889720852334 RRM 1; CCHC 2; KH
2.1409AT2G33440.1U2AF65AUL22f1417064014173437 RRM 1
2.1481AT2G13540.1CBP80Cbc2patCBP802f56368845642957 MIF4G 1; ARM 3
2.1553AT1G10320.1U2AF35_related_proteatUrp1r33841643388373 RRM 1; CCCH 2
2.1634AT5G44200.1CBP20Cbc1atCBP205r1780181417804065 RRM 1
2.225AT1G02840.1SF2/ASFatSR1/atSRp341f626741629819 RRM 2
2.225AT1G09140.1SF2/ASFatSRp301r29425642945961 RRM 2
2.231AT1G23860.19G8atRSzp211r84273568429319 RRM 1; CCHC 1
2.231AT2G24590.19G8atRSZp22a2f1044963110451184 RRM 1; CCHC 1
2.231AT4G31580.19G8atRSZp224f1530665415308347 RRM 1; CCHC 1
2.261AT5G64200.1SC35atSC355r2568120225683641 RRM 1;
2.2151AT1G55310.1TASR-2atSR33/atSCL331f2063006520632898 RRM 1
2.2151AT3G13570.1TASR-2atSCL30a3r44292984432159 RRM 1
2.2204AT4G25500.1Plant_Novel_SR_proteatRSp40/atRSP354f1302457113027440 RRM 2
2.2204AT5G52040.1Plant_Novel_SR_proteatRSp415f2113032021133621 RRM 2
2.2226AT2G46610.1Plant_Novel_SR_proteatRSp31a2r1913656619138762 RRM 2
2.2226AT3G61860.1Plant_Novel_SR_proteatRSp313r2290006822902395 RRM 2
2.2292AT3G55460.1TASR-2atSCL303f2056080820563762 RRM 1
2.2752AT3G49430.1SF2/ASFatSRp34b3f1833154618335041 RRM 2
2.2978AT5G18810.1TASR-2atSCL285r62687186271325 RRM 1
2.20AT4G02430SF2/ASFatSRp34b4f10689741072215 RRM 2
2.20AT3G535009G8atRS2Z323r1984532419848060 RRM 1;CCHC 2
2.20AT2G373409G8atRS2Z332r1567722615679765 RRM 1;CCHC 2
2.313AT2G47250.1hPrp43Prp43patPrp432r1939969419403044 DEAD 1; Helicase_C
2.313AT3G62310.1hPrp43Prp43patPrp433r2305724523060731 DEAD 1; Helicase_C
2.3255AT5G10800.1SR140atSR140-25r34126543418382 Surp 1;RRM 1;RPR 1
2.3255AT5G25060.1SR140atSR140-15r86340748640217 Surp 1;RRM 1;RPR 1
2.3549AT2G02570.1SPF30atSPF302r697951700917 Tudor 1
2.3647AT1G30480.1SPF45atSPF451f1079002210792575 DIII/G-patch domain
2.41AT3G12580.1HSP73/HSPA8AtHSP73-13r39912613993792 Hsp70 1;
2.41AT5G02500.1HSP73/HSPA8AtHSP73-25r553745556442 Hsp70 1;
2.41AT5G42020.1HSP73/HSPA8AtHSP73-35r1680748316810646 Hsp70 1;
2.4134AT4G21110.1G10Cwc14patG104f1126718511268959 G10 1;
2.4167AT3G13210.1hSyf3/CRNClf1/Syf3patCRN1b3f42449214247846 TPR 1; HAT 14; TPR
2.4167AT5G41770.1hSyf3/CRNClf1/Syf3patCRN1c5f1671799616721222 TPR 1; HAT 14; TPR
2.4167AT5G45990.1hSyf3/CRNClf1/Syf3patCRN1a5f1865132418653892 TPR 1; HAT 14; TPR
2.4168AT2G16600.1hSyf3/CRNClf1/Syf3patCypE2a/ROC32f72008077201574 Pro_isomerase 1
2.4168AT2G21130.1hSyf3/CRNClf1/Syf3patCypE1a/CYP22r90553989056232 Pro_isomerase 1
2.4168AT4G34870.1hSyf3/CRNClf1/Syf3patCypE2b4f1661432716615313 Pro_isomerase 1
2.4168AT4G38740.1hSyf3/CRNClf1/Syf3patCypE1b4r1808339518084251 Pro_isomerase 1
2.4288AT5G28740.1hSyf1Syf1patSyf15f1078077410783911 TPR 1;HAT 10;TPRli
2.4297AT1G07360.1hECM2Ecm2patECM2-1a1r22603892262865 RRM 1; CCCH 1
2.4297AT2G29580.1hECM2Ecm2patECM2-1b2f1265192312654336 RRM 1; CCCH 1
2.4407AT3G18165.1SPF27/BCAS2atSPF273f62231886225372 BCAS2 1
2.4414AT1G04510.1hPrp19Prp19patPrp19a1f12265751230827 WD-40 7; Ubox 1
2.4414AT2G33340.1hPrp19Prp19patPrp19b2r1412621714131153 WD-40 7; Ubox 1
2.4467AT3G16650.1PRL1Prp46patPRL23f56710675675324 WD-40 2;WD40like 1
2.4467AT4G15900.1PRL1Prp46patPRL14f90237289027666 WD-40 2;WD40like 1
2.4471AT2G16860.1GCIP_p29Syf2atGCIPp292r73039197306671
2.4545AT3G13200.1AD-002Cwc15patAD-0023f42421254244145 Cwf_Cwc_15 1
2.4559AT1G09770.1CDC5Cef1atCDC51f31618413165360 SANT 2
2.4640AT3G02710.1beta_catenin-like_1atCTNNNBL13f583113585948 Armadillo 1; ARM 1
2.4642AT2G38770.1KIAA0560atAquarius2r1620296316210338
2.4645AT1G77180.1SKIPPrp45patSKIP1r2899961829002135 SKIP/SNW 1
2.4866AT3G05070.1MGC23918atMGC239183f14161481417806
2.4983AT2G36130.1PPIase-like_1atPPIase-like12f1516677315168497 Pro_isomerase 1
2.41100AT3G18790.1hIsy1Isy1patIsy13f64776996479548 Lsy1 1
2.5122AT1G13350.1hPrp4kinaseatPRP4K-21r45724194576632 Pkinase 1;TyrKc 1;
2.5122AT3G25840.1hPrp4kinaseatPRP4K-13r94518619457554 Pkinase 1;TyrKc 1;
2.5122AT3G53640.1hPrp4kinaseatPRP4K-33r1988700719888935 Pkinase 1;TyrKc 1;
2.5220AT5G67320.1TBL1-rp_1atTBL1-rp15f2685715426861119 WD-40 5; Peptidease
2.5464AT3G52250.1N-CoR1atN-CoR13f1937613819383100 SANT 2;Homeodomain_
2.5474AT1G49590.1FBP-21atFBP211f1835478618356642 C2H2 1
2.5543AT3G54670.1Smc-1atSmc13f2023567820243960 ATP_GTP_A_BS 1;SMC_
2.5868AT2G41020.1NPW38atNPW382f1711726317121119 WW 2
2.665AT5G02530.1ALYYra1patALY-1a5r564085565863 RRM 1;
2.665AT5G59950.1ALYatALY-1b5f2414009724141858 RRM 1;
2.680AT5G11170.1UAP56atUAP56b5f35531173556977 DEAD 1; Helicase_C
2.680AT5G11200.1UAP56atUAP56a5f35671743571015 DEAD 1; Helicase_C
2.6227AT1G66260.1ALYatALY-2b1r2469564024698434 RRM 1
2.6227AT5G37720.1ALYatALY-2a5r1498163814984606 RRM 1
2.6342AT2G29210.1Srm160-likeatSRM1022f1255805112562348 PWI 1
2.6345AT1G16610.1RNPS1atSR45/atRNPS11r56757045678780 RRM 1
2.6348AT1G02140.1MagohatMagoh1r403190404456 Mago_nashi 1
2.6417AT3G19760.1Nuk-34/eIF4A3/DDX48atDDX48/eIF4A3-13f68637136866593 DEAD 1; Helicase_C
2.6480AT1G51510.1Y14atY141r1910279919104850 RRM 1; RBMB 4
2.6650AT1G15200.1pininatPinin1r52283365231061 Pinin/SDK/memA 1
2.713AT3G26560.1Prp22Prp22atPrp223r97499049753772 DEAD 1; Helicase_C
2.713AT5G13010.1Prp22Prp22atPrp225f41224104128861 DEAD 1; Helicase_C
2.7415AT1G03140.1Prp18Prp18atPrp18-11r754371756303 Prp18 1; SFM 1
2.7416AT1G10580.1Prp18Prp18atPrp17-11r34912813493737 WD-40 7;
2.7551AT1G65660.1Slu7Slu7patSLU7-1a1r2441810724421292
2.7551AT4G37120.1Slu7Slu7patSLU7-1b4f1748664717489294
2.7747AT5G54520.1Prp17Prp17patPrp17-25r2214651422149120 WD-40 6
2.71102AT1G27900.1Prp22Prp22atPrp22-31r97154539720568 DEAD 1;Helicase_C
2.71103AT1G26370.1Prp22Prp22atPrp22-21r91214929125557 DEAD 1;Helicase_C
2.813AT1G32490.1Prp2atPrp2-1a1r1174205411749775 DEAD 1; Helicase_C
2.813AT2G35340.1Prp2atPrp2-1b2f1487232014879739 DEAD 1; Helicase_C
2.813AT4G16680.1Prp2atPrp2-24r93880719390774 DEAD 1; Helicase_C
2.8293AT3G23900.1SRm300atSRM300like3r86316068636045 RRM 1; Filamin/ABP28
2.8296AT1G20920.1Prp5atPrp5-1b1f72851147289778 DEAD 1; Helicase_C
2.8296AT3G09620.1Prp5atPrp5-1a3r29491522952205 DEAD 1; Helicase_C
2.8478AT1G07350.1hTra-2/SFRS10atTra/SFRS11r22574252260101 RRM 1
2.8754AT2G47330.1Prp5atPrp5-22r1942889719431720 DEAD 1;Helicase_C
2.8979AT4G31770.1hDbr1dbr1atDbr14r1537006615372596 Metallophos 1;DBRI

3. Splicing regulation

Group

CIWOG

Gene

hHomologs

SeHomologs

Gene Name

Chr

str

from

to

Txn

Domains

Transcripts

3.171AT3G53570.1Lammer/CLKkinaseAFC13r1986130019864499 Pkinase 1; TyrKc 1
3.171AT4G24740.1Lammer/CLKkinaseAFC24r1275452912757773 Pkinase 1; TyrKc 1
3.1135AT3G44850.1KinaseSRPK2atSRPK2c3r1637461716376931 Pkinase 1; TyrKc 1
3.1135AT3G53030.1KinaseSRPK2atSRPK2b3f1966228119664505 Pkinase 1; TyrKc 1
3.1135AT5G22840.1KinaseSRPK2atSRPK2a5r76307177633223 Pkinase 1; TyrKc 1
3.1209AT2G17530.1KinaseSRPK1atSRPK1a2f76263597629149 Pkinase 1; TyrKc 1
3.1209AT4G35500.1KinaseSRPK1atSRPK1b4f1685729916859580 Pkinase 1; TyrKc 1
3.1290AT4G32660.1KinaseLammer/CLK_kinaseAFC34f1575612815759314 Pkinase 1;TyrKc 1;S
3.245AT3G23830.1Glycine-Rich_RBDatGRBP1d3r86064778608055 RRM 1
3.245AT4G13850.1Glycine-Rich_RBDatGRBP1c4f80209528022260 RRM 1
3.245AT5G61030.1Glycine-Rich_RBDatGRBP1e5f2456045124562306 RRM 1
3.2109AT2G21660.1Glycine-Rich_RBDAtGRP7/atGRBP3a2r92652499266393 RRM 1
3.329AT3G07810.1hnRNP_A/BAtRNPA/B_63f24922732495750 RRM 2
3.329AT4G26650.1hnRNP_A/BAtRNPA/B_44f1344485013448212 RRM 2
3.329AT5G47620.1hnRNP_A/BAtRNPA/B_55r1930227019304737 RRM 2
3.329AT5G55550.1hnRNP_A/BAtRNPA/B_35r2250153522504011 RRM 2
3.3149AT2G41060.1hnRNP_A/BUBA2b2f1712698917129563 RRM 2
3.3149AT3G56860.1hnRNP_A/BUBA2a3r2104888921052237 RRM 2
3.3257AT3G15010.1hnRNP_A/BUBA2c3f50527315054918 RRM 2
3.3418AT4G14300.1hnRNP_A/BAtRNPA/B_14f82310178232991 RRM 2
3.3648AT1G17640.1hnRNP_A/BAtRNPA/B_8b1r60673946069098 RRM 2
3.3655AT3G13224.1hnRNP_A/BAtRNP_N13f42547604257409 RRM 2;HUDSXLRNA 2
3.31098AT5G40490.1hnRNP_A/BAtRNPA/B_8a5f1622537616227709 RRM 2; Eggshell 4
3.31500AT1G58470.1hnRNP_A/BAtRNPA/B_71f2172702421728760 RRM 2
3.493AT2G44710.1hnRNP_R/QhnRNP-R3/AtRNPA/B2f1843271918437132 RRM 3
3.4120AT3G52660.1hnRNP_R/QhnRNP-R23f1952166019524906 RRM 3
3.4179AT4G00830.1hnRNP_R/QhnRNP-R14f352023355233 RRM 3
3.4183AT1G03457.1CUG-BPAtCUG-BP21r860788864125 RRM 3; HUDSXLRNA 4
3.4183AT4G03110.1CUG-BPAtCUG-BP14r13763061379420 RRM 3; HUDSXLRNA 4
3.4337AT4G16280.3_atFCA14r92071639214412 RRM 2; WW 1
3.4350AT3G26420.1hnRNP_Gat-hnRNP-G23f96715179676005 RRM 1; CCHC 1
3.4555AT1G50300.1hnRNP_P2at-hnRNP-P1r1862855518631946 RRM 1; ZnF_RBZ 2
3.4639AT3G04610.1hnRNP_E1/E2at-hnRNP-E3r12505531254873 KH 3
3.4746AT5G66010.1hnRNP_F/hnRNP_Hat-hnRNP-F/AtRNPH/F_5f2639952826400999 RRM 2
3.4867AT2G47310.1_atFCA22f1942368419427277 RRM 2; WW 1
3.4869AT1G60650.1hnRNP_Gat-hnRNP-G31f2233980922342297 RRM 1; CCHC 1
3.4869AT5G04280.1hnRNP_Gat-hnRNP-G15f11922741195662 RRM 1; CCHC 1
3.4980AT3G20890.1hnRNP_F/hnRNP_Hat-hnRNP-H/AtRNPH/F3f73198487321054 RRM 2
3.5107AT4G16830.1hnRNP-like_5Ath14f94703859472594 HANP4_PAI-RBP! 1
3.5107AT4G17520.1hnRNP-like_5Ath24f97712979773592 HANP4_PAI-RBP! 1
3.5107AT5G47210.1hnRNP-like_5Ath35r1916902219171263 HANP4_PAI-RBP! 1
3.5137AT1G17370.1hnRNP-like_1AtUBP1b1r59515425955037 RRM 3
3.5137AT3G14100.1hnRNP-like_1AtUBP1c3f46729194676162 RRM 3
3.5146AT4G27000.1hnRNP-like_3atRBP45c4r1355460413557854 RRM 3
3.5146AT5G54900.1hnRNP-like_3atRBP45a5f2229538322298346 RRM 3
3.5410AT1G47490.1hnRNP-like_4AtRBP47c1f1742466917427475 RRM 3
3.5410AT1G47500.1hnRNP-like_4AtRBP47c'1f1743251817435064 RRM 3
3.5636AT5G19350.1hnRNP-like_3atRBP45d5f65188386521474 RRM 3
3.5870AT1G49600.1hnRNP-like_4AtRBP47a1r1835688618360150 RRM 3
3.5870AT3G19130.1hnRNP-like_4AtRBP47b3r66111986614044 RRM 3
3.52283AT2G19380.1hnRNP-like_2UBA1c2f83838568386604
3.52283AT2G22090.1hnRNP-like_2UBA1a2r93882609390507
3.52283AT2G22100.1hnRNP-like_2UBA1b2r93922109393562

4. Novel spliceosome proteins

Group

CIWOG

Gene

hHomologs

SeHomologs

Gene Name

Chr

str

from

to

Txn

Domains

Transcripts

4.1148AT2G46280.1eIF3sub2at-eIF3sub2a2r1900342619005536 WD40 4
4.1148AT2G46290.1eIF3sub2at-eIF3sub2b2r1900577119007879 WD40 4
4.1206AT1G24706.1hTHO2atTHO21f87419408755558 Tho2
4.1254AT5G42920.1KIAA0983atKIAA0983-15r1720615117209535 Fimp 1
4.1291AT3G57290.1eIF3_sub6at-eIF3sub63r2119655021199183
4.1335AT5G08550.1C21orf66atC21orf665r27656422770282
4.1400AT5G09860.1hHPR1atHPR15f30666323070933
4.1483AT1G55460.1HsKin17Rts2patKin17-11f2070747820709024
4.1541AT4G25550.1CF_I-25kDatCFI-25kD-14f1304837713051169
4.1976AT5G51660.1CPSF_160KatCPSF-160k5f2098021520989427
4.11205AT4G29820.1CF_I-25kDatCFI-25kD-24r1459568014597481
4.232AT1G22760.1PAB1/PAB2atPABP1/atPAB11f80553258059015 RRM 4
4.232AT1G49760.1PAB1/PAB2atPABP7/atPAB81f1841648018420047 RRM 4
4.232AT1G71770.1PAB1/PAB2atPABP5/atPAB51r2699050826993447 RRM 4
4.232AT2G23350.1PAB1/PAB2atPABP4/atPAB42f99430539946269 RRM 4
4.232AT4G34110.1PAB1/PAB2atPABP2/atPAB24f1633638716340098 RRM 4
4.2468AT2G36660.1PAB1/PAB2atPABP6/atPAB72r1536132115364398
4.22282AT3G16380.1PAB1/PAB2atPABP1/atPAB63r55586765560993
4.369AT3G01540.1p72p72-43r212751216671 DEAD 1; Helicase_C
4.369AT3G06480.1p72p72-33r19854551990153 DEAD 1; Helicase_C
4.369AT5G14610.1p72p72-55f47105634715069 DEAD 1; Helicase_C
4.3100AT1G55150.1p72p72-11f2057448020577320 DEAD 1; Helicase 1
4.3136AT1G59760.1KIAA0052atKIAA0052a1r2198444521990175 DEAD 1; DSHCT 1; H
4.3136AT2G06990.1KIAA0052atKIAA0052b2f28949402901078 DEAD 1; DSHCT 1; H
4.3339AT3G53110.1hDbp5Dbp5patDbp53f1968774019690661
4.3462AT4G33370.1Abstrakt(Ded1p)atAbstrakt-b4r1606966916071405
4.3462AT5G51280.1Abstrakt(Ded1p)atAbstrakt-a5f2084124520843806
4.3654AT4G18465.1DDX35atDDX354f1019705610201611
4.4404AT3G44600.1KIAA0073atKIA00733r1616493516169262
4.4652AT1G01940.1PPIase-like_3atPPIL31f323027324917
4.4745AT5G67530.1Cyp-60atCYP-605f2694118226944146
4.4751AT4G33060.1SDCCAG10atSDCCAG104f1594849015952223
4.554AT1G67580.1CDCL2_p110atCDCL2p110-11r2532728425331379 Pkinase_Tyr 1; Pkin
4.570AT2G16940.1RNPC2atNPC2b2r73426077347408 RRM 2
4.570AT5G09880.1RNPC2atNPC2a5r30814423085264 RRM 2
4.599AT5G15270.1IMP3atIMP3/KOC5f49583374962008 KH 4
4.5180AT3G54230.1RBM5atRBM53f2007310420080264 G-patch 1; RRM 2;
4.5184AT1G54440.1PMSCL2atPMSCL2-21f2032305320328067 3_5_exonuc 1; HRDC
4.5184AT5G35910.1PMSCL2atPMSCL2-15r1402968614035405 3_5_exonuc 1; HRDC
4.5207AT1G16810.1DKFZP586O0120atDKFZP586O01201f57555885756895 DUF1754 1
4.5261AT1G18080.1RACK1Asc1patRACK1c/ARCA1f62222016224151 WD40 5
4.5261AT1G48630.1RACK1Asc1patRACK1b1r1798177317983327 WD40 5
4.5261AT3G18130.1RACK1Asc1patRACK1a3r62109046212433 WD40 5
4.5289AT4G39680.1AcinusLatAcinusL4r1841430618417530 SAP 1
4.5294AT1G73720.1hSmu-1/FLJ10805atSmu-11f2772500227729931
4.5334AT5G22330.1TIP-49Rvb1patTIP495r73907967394194
4.5340AT3G45180.1UBL5pHub1patUBL5b3r1653899116539212
4.5340AT5G42300.1UBL5pHub1patUBL5a5r1691233316913930
4.5343AT1G80930.1KIAA1604atKIAA16041r3040543230409710
4.5406AT3G19840.1CA150atCA1503f68911296897227
4.5408AT3G07790.1DGSI_proteinatDGCR143f24873692489220
4.5465AT3G52120.1SF4/F23858atSF43f1932871119331970
4.5473AT1G61620.1NOSIPatNOSIP1f2273754322739430
4.5476AT1G17070.1TFIP11/TIP39atTFIP11/TIP39a1f58375905840332
4.5476AT2G42330.1TFIP11/TIP39atTFIP11/TIP39b2r1763072917634089
4.5484AT3G49830.1TIP-48atRuvB/TIP48a3f1848238318483940
4.5484AT5G67630.1TIP-48atRuvB/TIP48b5r2696738126969394
4.5544AT3G52380.1PUF60atCP33/PUF60like3f1942139719423097
4.5552AT1G16970.1Ku70atKu701r58007675805799
4.5554AT1G01350.1ZNF183atZNF183a1f136124138162
4.5554AT5G06420.1ZNF183atZNF183b5f19614111963038
4.5556AT4G08580.1MFAP1atMFAP1b4f54614835463907
4.5556AT5G17900.1MFAP1atMFAP1a5f59247075926901
4.5633AT5G64730.1MGC4238atMORG15f2587311225875267
4.5643AT2G32415.1PMSCL2atPMSCL2-32r1376113713765456
4.5644AT2G26460.1PMSCL2atRED2r1125493211258973
4.5646AT1G67210.1FLJ90157/DKFZp434E22atPSP11f2514081525144043
4.5646AT5G38600.1FLJ90157/DKFZp434E22atPSP25f1545659515460767
4.5649AT1G17130.1FLJ10374atCWF16-11f58541485856697
4.5651AT1G03910.1CactinatCactin1f9961151000231
4.5748AT5G53440.1KIAA0853atKIAA08535r2168367921687970
4.5749AT5G23590.1FLJ10634atCAJ1/FLJ106345r79535297955640
4.5750AT5G23080.1FLJ10206atFLJ102065r77429407748933
4.5871AT1G31870.1MGC13125Cwc26patMGC131251f1143674711440109
4.5977AT5G22080.1SPF31atSPF31/Jiv5r73103787313619
4.51203AT5G41790.1NuMAatCIP1/atNuMA5f1672753016732847
4.53414AT2G32050.1FLJ10374atCWF16-32r1363787913637879
4.53414AT3G43250.1FLJ10374atCWF16-23f1521671315217462

5. Possible splicing related proteins

Group

CIWOG

Gene

hHomologs

SeHomologs

Gene Name

Chr

str

from

to

Txn

Domains

Transcripts

5.1106AT4G35785.1Splicing_factor_likeatSFL14r1695296316955266 RRM 1
5.1205AT2G25970.1Splicing_factor_likeatSFL32r1107165111075669 KH_1 2
5.1224AT3G63400.1Splicing_factor_likeatSFL6a3f2341202323415659 Pro_isomerase 1
5.1542AT3G56070.1Splicing_factor_likeatSFL6b3r2080674920808152
5.1547AT3G11960.1Splicing_factor_likeatSFL53f37863863793375
5.1641AT2G40650.1Splicing_factor_likeatSFL42r1696331916965752
5.2121AT3G05060.1DNA_binding_protein_atDBP1a3r14128671415966 NOP5NT 1; NOSIC 1;
5.2121AT5G27120.1DNA_binding_protein_atDBP1b5f95409259543871 NOP5NT 1; NOSIC 1;
5.2333AT5G58470.1RNA_binding_2atRBD2b5r2363770723640920
5.2338AT4G05420.1DNA_binding_protein_atDBP2b4f27461212752943
5.2338AT4G21100.1DNA_binding_protein_atDBP2a4r1125876111265463
5.2341AT2G38610.1RNA_binding_1atRBD1b2r1614711316149873
5.2401AT4G24770.1ChloroplastRNA_Binding_31atCP31a4r1276603012768040
5.2401AT5G50250.1ChloroplastRNA_Binding_31atCP31b5r2045248720454013
5.21204AT5G06210.1Similar_to_RNA_bindiatRBD55f18784711879740
5.3258AT2G34210.1SPT5atSPT5b2f1444593814450522 KOW 1; Supt5 2
5.3258AT4G08350.1SPT5atSPT5a4f52862295292239 KOW 1; Supt5 2
5.3295AT1G45332.1Elongation_Factor(M)atEFMb1r1717232217176821
5.3295AT2G45030.1Elongation_Factor(M)atEFMa2f1857241118576970
5.3477AT1G09660.1Elongation_FactoratEF21r31277713131094
5.3759AT1G62750.1Elongation_FactoratEF11r2323343423236447
5.41096AT5G49350.1Glycine_Rich_ProteinatGRPs-45r2000974120011099
5.41767AT5G07520.1Glycine_Rich_ProteinAtGRP175r23799242381317
5.41767AT5G07530.1Glycine_Rich_ProteinAtGRP175r23824682384521
5.41767AT5G07550.1Glycine_Rich_ProteinAtGRP195r23883102389249
5.41767AT5G07560.1Glycine_Rich_ProteinAtGRP205r23902072391075

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