1.5 U4/U6 snRNP specific proteins
Species |
CIWOG |
Gene |
hHomologs |
SeHomologs |
Gene Name |
Barta Name |
Chr |
str |
from |
to |
Txn |
Domains |
Transcripts |
|
| At | 223 | AT4G12600.1 | U4/U6-15.5K | Snu13p | atTri15.5-1b | 4 | f | 7453202 | 7454481 | Ribosomal_L7Ae 1 | ||||
| At | 223 | AT4G22380.1 | U4/U6-15.5K | Snu13p | atTri15.5-1c | 4 | r | 11811750 | 11813000 | Ribosomal_L7Ae 1 | ||||
| At | 223 | AT5G20160.1 | U4/U6-15.5K | Snu13p | atTri15.5-1a | 5 | r | 6803782 | 6805201 | Ribosomal_L7Ae 1 | ||||
| At | 260 | AT1G60170.1 | U4/U6-61KD | Prp31 | atU5-61/Prp31a | 1 | f | 22192773 | 22195400 | Nop 1 | ||||
| At | 411 | AT1G28060.1 | U4/U6-90K/SAP90 | Prp3p | atSAP90-1 | 1 | f | 9779138 | 9782700 | |||||
| At | 756 | AT2G41500.1 | U4/U6-60K/SAP60 | Prp4p | atSAP60 | 2 | r | 17304130 | 17307426 | WD-40 7;SFM 1;WD40 | ||||
| Gm | 223 | Glyma02g39510.1 | U4/U6-15.5K | Snu13p | gmTri15.5-1a-1 | 2 | r | 44813180 | 44815364 | Ribosomal_L7Ae 1 | ||||
| Gm | 223 | Glyma13g23690.1 | U4/U6-15.5K | Snu13p | gmTri15.5-1a-2 | 13 | r | 27043574 | 27045117 | Ribosomal_L7Ae 1 | ||||
| Gm | 223 | Glyma14g37600.1 | U4/U6-15.5K | Snu13p | gmTri15.5-1a-3 | 14 | f | 46875650 | 46878349 | Ribosomal_L7Ae 1 | ||||
| Gm | 223 | Glyma17g12430.1 | U4/U6-15.5K | Snu13p | gmTri15.5-1a-4 | 17 | r | 9407831 | 9409397 | Ribosomal_L7Ae 1 | ||||
| Gm | 260 | Glyma16g06810.1 | U4/U6-61KD | Prp31 | gmU5-61/Prp31a-1 | 16 | f | 6140056 | 6146285 | Nop 1 | ||||
| Gm | 260 | Glyma19g24310.1 | U4/U6-61KD | Prp31 | gmU5-61/Prp31a-2 | 19 | f | 29780660 | 29787596 | Nop 1 | ||||
| Gm | 411 | Glyma01g43990.1 | U4/U6-90K/SAP90 | Prp3p | gmSAP90-1a | 1 | r | 54822548 | 54827761 | |||||
| Gm | 411 | Glyma11g01460.1 | U4/U6-90K/SAP90 | Prp3p | gmSAP90-1b | 11 | r | 871736 | 876559 | |||||
| Gm | 411 | Glyma20g38600.1 | U4/U6-90K/SAP90 | Prp3p | gmSAP90-1c | 20 | r | 46144450 | 46148790 | |||||
| Gm | 756 | Glyma02g34620.1 | U4/U6-60K/SAP60 | Prp4p | gmSAP60-1 | 2 | f | 38899721 | 38904362 | WD-40 7;SFM 1;WD40 | ||||
| Gm | 756 | Glyma10g00300.1 | U4/U6-60K/SAP60 | Prp4p | gmSAP60-2 | 10 | r | 97415 | 103542 | WD-40 7;SFM 1;WD40 | ||||
| Lj | 223 | chr1.LjT39K18.150.nc | U4/U6-15.5K | Snu13p | ljTri15.5-1a | 1 | r | 5034883 | 5036574 | Ribosomal_L7Ae 1 | ||||
| Lj | 260 | LjSGA_058502.1 | U4/U6-61KD | Prp31 | ljU5-61/Prp31a | Nop 1 | ||||||||
| Lj | 411 | chr5.CM0260.430.nc | U4/U6-90K/SAP90 | Prp3p | ljSAP90-1 | 5 | r | 62508432 | 62512622 | |||||
| Lj | 756 | chr5.CM0278.220.nc | U4/U6-60K/SAP60 | Prp4p | ljSAP60 | 5 | f | 17484489 | 17486499 | WD-40 7;SFM 1;WD40 | ||||
| Mt | 260 | IMGA|AC150800_1.2 | U4/U6-61KD | Prp31 | mtU5-61/Prp31a | 7 | r | 7179366 | 7186025 | Nop 1 | ||||
| Mt | 411 | IMGA|CT571261_24.2 | U4/U6-90K/SAP90 | Prp3p | mtSAP90-1 | 5 | r | 16094953 | 16095622 | |||||
| Mt | 756 | IMGA|CR936327_16.2 | U4/U6-60K/SAP60 | Prp4p | mtSAP60 | 5 | r | 8845304 | 8848188 | WD-40 7;SFM 1;WD40 | ||||
| Os | 223 | LOC_Os03g13800.1 | U4/U6-15.5K | Snu13p | osTri15.5-1a | 3 | f | 7475176 | 7477174 | Ribosomal_L7Ae 1 | ||||
| Os | 260 | LOC_Os04g46890.1 | U4/U6-61KD | Prp31 | osU5-61/Prp31a-1 | 4 | f | 27606661 | 27611264 | Nop 1 | ||||
| Os | 260 | LOC_Os04g46890.2 | U4/U6-61KD | Prp31 | osU5-61/Prp31a-1 | 4 | f | 27606661 | 27611264 | Nop 1 | ||||
| Os | 260 | LOC_Os04g46890.3 | U4/U6-61KD | Prp31 | osU5-61/Prp31a-1 | 4 | f | 27606661 | 27611264 | Nop 1 | ||||
| Os | 260 | LOC_Os07g04850.1 | U4/U6-61KD | Prp31 | osU5-61/Prp31a-2 | 7 | f | 2143151 | 2150825 | Nop 1 | ||||
| Os | 260 | LOC_Os07g04850.2 | U4/U6-61KD | Prp31 | osU5-61/Prp31a-2 | 7 | f | 2143164 | 2150800 | Nop 1 | ||||
| Os | 260 | LOC_Os07g04850.3 | U4/U6-61KD | Prp31 | osU5-61/Prp31a-2 | 7 | f | 2143161 | 2150800 | Nop 1 | ||||
| Os | 411 | LOC_Os09g07500.1 | U4/U6-90K/SAP90 | Prp3p | osSAP90-1 | 9 | r | 3750007 | 3752649 | |||||
| Os | 411 | LOC_Os09g07500.2 | U4/U6-90K/SAP90 | Prp3p | osSAP90-1 | 9 | r | 3750007 | 3752652 | |||||
| Os | 411 | LOC_Os09g07500.3 | U4/U6-90K/SAP90 | Prp3p | osSAP90-1 | 9 | r | 3750007 | 3753991 | |||||
| Os | 756 | LOC_Os03g23909.1 | U4/U6-60K/SAP60 | Prp4p | osSAP60 | 3 | f | 13569721 | 13576074 | WD-40 7;SFM 1;WD40 | ||||
| Pp | 223 | estExt_gwp_gw1.C_280040 | U4/U6-15.5K | Snu13p | ppTri15.5-1a-1 | 28 | r | 313617 | 314003 | Ribosomal_L7Ae 1 | ||||
| Pp | 223 | estExt_gwp_gw1.C_650023 | U4/U6-15.5K | Snu13p | ppTri15.5-1a-2 | 65 | r | 150885 | 151271 | Ribosomal_L7Ae 1 | ||||
| Pp | 223 | estExt_Genewise1.C_340284 | U4/U6-15.5K | Snu13p | ppTri15.5-1a-3 | 34 | r | 1728383 | 1728769 | Ribosomal_L7Ae 1 | ||||
| Pp | 223 | estExt_Genewise1.C_650018 | U4/U6-15.5K | Snu13p | ppTri15.5-1a-4 | 65 | f | 136621 | 137007 | Ribosomal_L7Ae 1 | ||||
| Pp | 260 | fgenesh1_pm.scaffold_154000005 | U4/U6-61KD | Prp31 | ppU5-61/Prp31a | 154 | f | 295513 | 298831 | Nop 1 | ||||
| Pp | 411 | estExt_fgenesh1_pg.C_2690063 | U4/U6-90K/SAP90 | Prp3p | ppSAP90-1 | 269 | f | 583553 | 585615 | |||||
| Pp | 756 | e_gw1.29.46.1 | U4/U6-60K/SAP60 | Prp4p | ppSAP60 | 29 | r | 1575117 | 1577898 | WD-40 7;SFM 1;WD40 | ||||
| Pt | 223 | jgi|Poptr1_1|826867|estExt_fgenesh4_pg.C_410046 | U4/U6-15.5K | Snu13p | ptTri15.5-1a | 41 | f | 509769 | 511509 | Ribosomal_L7Ae 1 | ||||
| Pt | 260 | jgi|Poptr1_1|245102|gw1.XIV.1845.1 | U4/U6-61KD | Prp31 | ptU5-61/Prp31a-1 | 14 | f | 3866635 | 3869891 | Nop 1 | ||||
| Pt | 260 | jgi|Poptr1_1|552316|eugene3.00021631 | U4/U6-61KD | Prp31 | ptU5-61/Prp31a-2 | 2 | f | 13632935 | 13636482 | Nop 1 | ||||
| Pt | 411 | jgi|Poptr1_1|227722|gw1.X.2419.1 | U4/U6-90K/SAP90 | Prp3p | ptSAP90-1 | 10 | f | 18486913 | 18489265 | |||||
| Pt | 411 | jgi|Poptr1_1|765377|fgenesh4_pg.C_LG_VIII000391 | U4/U6-90K/SAP90 | Prp3p | ptSAP90-1 | 8 | r | 2600995 | 2603279 | |||||
| Pt | 756 | jgi|Poptr1_1|801796|fgenesh4_pm.C_LG_VI000143 | U4/U6-60K/SAP60 | Prp4p | ptSAP60 | 6 | r | 2968182 | 2971187 | WD-40 7;SFM 1;WD40 | ||||
| Sb | 223 | Sb01g047920.1 | U4/U6-15.5K | Snu13p | sbTri15.5-1a-1 | 1 | r | 71000989 | 71002777 | Ribosomal_L7Ae 1 | ||||
| Sb | 223 | Sb01g041420.1 | U4/U6-15.5K | Snu13p | sbTri15.5-1a-2 | 1 | r | 64743199 | 64745389 | Ribosomal_L7Ae 1 | ||||
| Sb | 260 | Sb06g024840.1 | U4/U6-61KD | Prp31 | sbU5-61/Prp31a | 6 | f | 53870068 | 53876463 | Nop 1 | ||||
| Sb | 411 | Sb04g009590.2 | U4/U6-90K/SAP90 | Prp3p | sbSAP90-1 | 4 | r | 12101128 | 12105407 | |||||
| Sb | 756 | Sb01g035220.1 | U4/U6-60K/SAP60 | Prp4p | sbSAP60 | 1 | r | 58737469 | 58740917 | WD-40 7;SFM 1;WD40 | ||||
| Vv | 223 | GSVIVT00016877001 | U4/U6-15.5K | Snu13p | vvTri15.5-1a-1 | 11 | f | 4378235 | 4380877 | Ribosomal_L7Ae 1 | ||||
| Vv | 223 | GSVIVT00018373001 | U4/U6-15.5K | Snu13p | vvTri15.5-1a-2 | 13 | f | 4019581 | 4022697 | Ribosomal_L7Ae 1 | ||||
| Vv | 260 | GSVIVT00028845001 | U4/U6-61KD | Prp31 | vvU5-61/Prp31a | 1 | r | 7709644 | 7718425 | Nop 1 | ||||
| Vv | 411 | GSVIVT00029506001 | U4/U6-90K/SAP90 | Prp3p | vvSAP90-1 | 13 | r | 2070408 | 2075669 | |||||
| Vv | 756 | GSVIVT00025331001 | U4/U6-60K/SAP60 | Prp4p | vvSAP60 | 8 | r | 18833922 | 18837549 | WD-40 7;SFM 1;WD40 | ||||
| Zm | 223 | GRMZM2G140799_T01 | U4/U6-15.5K | Snu13p | zmTri15.5-1a | 9 | f | 138963196 | 138965588 | Ribosomal_L7Ae 1 | ||||
| Zm | 260 | GRMZM2G003307_T01 | U4/U6-61KD | Prp31 | zmU5-61/Prp31a | 2 | r | 18957596 | 18961570 | Nop 1 | ||||
| Zm | 260 | GRMZM2G003307_T02 | U4/U6-61KD | Prp31 | zmU5-61/Prp31a | 2 | r | 18957596 | 18961549 | Nop 1 | ||||
| Zm | 411 | GRMZM2G375172_T01 | U4/U6-90K/SAP90 | Prp3p | zmSAP90-1 | 5 | f | 139585850 | 139590643 | |||||
| Zm | 756 | GRMZM2G101689_T01 | U4/U6-60K/SAP60 | Prp4p | zmSAP60 | 1 | f | 60926894 | 60931182 | WD-40 7;SFM 1;WD40 |