TE nest: Annotation and Display of Nested Transposable Elements

TE nest: Submit Transposable Elements to Database

Home TE nest svg_ltr Database Submission
Input TE Sequece
Input TE Sequence in FASTA format


or upload sequence file in FASTA format:
TE Information
Organism:

TE Class:

TE Order:

TE Superfamily:

Please enter sequence name and location for each member identified in the following format:
Accession number,Start-End; Accession number, Start-End, Start-End, Start-End

For example, a TE with 3 identifications, 2 found in AC01 and 1 in AC02 with one split by nesting into 3 sections will look like:
AC01, 10000-16000; AC01, 20000-22000, 25000-27000, 34000-36000; AC02, 4000-10000
 TE name

Please enter any additional information or comments:
Identify LTR
Ignore this section if this is not a LTR Retrotransposon


Input LTR Sequence in FASTA format

or upload LTR file in FASTA format:
Submitter Information
Please enter the following information so we can contact you with your submission results. Thank You.

Email address
Submitter's name
Submitter's institution



Brent A. Kronmiller, 2006 bak@iastate.edu.
Brent's homepage: bak
Wiselab homepage: wiselab