The table below organizes the GhGDB annotation results - you can browse the latest results (Date column), look at particular BACs (GI column),
or search for specific putative Arabidopsis homologs by ID or description.For quick table tips, hover over any underlined link.
| 145864558 |
ZMMBBb-313G23 |
AT1G15080.1 |
22654 |
24800 |
| Symbol: None | phosphatidic acid phosphatase family protein / PAP2 family protein, similar to phosphatidic acid phosphatase 2a2 (Cavia porcellus) GI:3641336; contains Pfam profile PF01569 PAP2 superfamily | chr1:5187623-5189668 FORWARD | Aliases: F9L1.2, F9L1_2 |
2007-07-18 |
| 133902319 |
|
AT1G76340.1 |
101628 |
102747 |
| Symbol: None | integral membrane family protein, contains Pfam profile PF00892: Integral membrane protein; similar to GDP-mannose transporter (SP:Q941R4) (Arabidopsis thaliana) and to LPG2 protein (GI:9998817) (Leishmania mexicana) | chr1:28639849-28641200 REVERSE | Aliases: F15M4.16, F15M4_16 |
2007-07-18 |
| 133902319 |
|
AT1G44575.1 |
127255 |
128412 |
| Symbol: None | photosystem II 22kDa protein, chloroplast / CP22 (PSBS), identical to photosystem II 22 kDa protein, chloroplast (precursor) SP:Q9XF91 from (Arabidopsis thaliana); contains Pfam profile PF00504: Chlorophyll A-B binding protein | chr1:16874163-16875818 FORWARD | Aliases: T18F15.3, T18F15_3 |
2007-07-18 |
| 133902311 |
|
AT1G76340.1 |
97721 |
98840 |
| Symbol: None | integral membrane family protein, contains Pfam profile PF00892: Integral membrane protein; similar to GDP-mannose transporter (SP:Q941R4) (Arabidopsis thaliana) and to LPG2 protein (GI:9998817) (Leishmania mexicana) | chr1:28639849-28641200 REVERSE | Aliases: F15M4.16, F15M4_16 |
2007-07-18 |
| 124001813 |
ZMMBBb-318C18; ZMMBBb0318C18 |
AT1G51570.1 |
91412 |
93730 |
| Symbol: None | C2 domain-containing protein, contains INTERPRO:IPR000008 C2 domain | chr1:19125844-19128356 REVERSE | Aliases: F19C24.20, F19C24_20 |
2007-07-18 |
| 124001813 |
ZMMBBb-318C18; ZMMBBb0318C18 |
AT3G57880.1 |
91412 |
93730 |
| Symbol: None | C2 domain-containing protein, contains INTERPRO:IPR000008 C2 domain | chr3:21441993-21445363 REVERSE | Aliases: T10K17.90 |
2007-07-18 |
| 124001813 |
ZMMBBb-318C18; ZMMBBb0318C18 |
AT5G12970.1 |
91412 |
93730 |
| Symbol: None | C2 domain-containing protein, contains INTERPRO:IPR000008 C2 domain | chr5:4102138-4105330 FORWARD | Aliases: T24H18.140, T24H18_140 |
2007-07-18 |
| 118601621 |
ZMMBBb-551L9; ZMMBBb0551L09 |
AT5G60020.1 |
52384 |
54575 |
| Symbol: None | laccase, putative / diphenol oxidase, putative, similar to laccase LAC2-4, Liriodendron tulipifera, EMBL:LTU73106 (GI:1621467) | chr5:24185222-24187688 FORWARD | Aliases: MMN10.20, MMN10_20 |
2007-07-18 |
| 118601251 |
ZMMBBb-120B23; ZMMBBb0120B23 |
AT5G11700.1 |
74689 |
86395 |
| Symbol: None | glycine-rich protein, predicted protein, Arabidopsis thaliana | chr5:3762467-3771124 REVERSE | Aliases: T22P22.90, T22P22_90 |
2007-07-18 |
| 118601249 |
ZMMBBb-119M11; ZMMBBb0119M11 |
AT5G52590.1 |
40429 |
44184 |
| Symbol: None | RabGAP/TBC domain-containing protein, contains similarity to SP:P48365 GTPase-activating protein GYP7 {Saccharomyces cerevisiae}; contains Pfam profile PF00566: TBC domain | chr5:21356854-21360210 FORWARD | Aliases: F6N7.7, F6N7_7 |
2007-07-18 |
| 117962369 |
ZMMBBb-423E3; ZMMBBb0423E03 |
AT4G10450.1 |
40797 |
41844 |
| Symbol: None | 60S ribosomal protein L9 (RPL90D), ribosomal protein L9, cytosolic - garden pea, PIR2:S19978 | chr4:6462949-6464521 REVERSE | Aliases: F7L13.30, F7L13_30 |
2007-07-18 |
| 117962369 |
ZMMBBb-423E3; ZMMBBb0423E03 |
AT1G33140.1 |
40797 |
41844 |
| Symbol: None | 60S ribosomal protein L9 (RPL90A/C), similar to RIBOSOMAL PROTEIN L9 GB:P49209 from (Arabidopsis thaliana) | chr1:12023255-12024747 FORWARD | Aliases: T9L6.5 |
2007-07-18 |
| 117962369 |
ZMMBBb-423E3; ZMMBBb0423E03 |
AT1G33120.1 |
40797 |
41844 |
| Symbol: None | 60S ribosomal protein L9 (RPL90B), similar to RIBOSOMAL PROTEIN L9 GB:P49209 from (Arabidopsis thaliana) | chr1:12010886-12012504 FORWARD | Aliases: T9L6.2, T9L6_2 |
2007-07-18 |
| 117962369 |
ZMMBBb-423E3; ZMMBBb0423E03 |
AT2G42100.1 |
75045 |
76440 |
| Symbol: None | actin, putative, very strong similarity to SP:P53496 Actin 11 {Arabidopsis thaliana}, SP:P53493 Actin 3 {Arabidopsis thaliana}; contains Pfam profile PF00022: Actin | chr2:17567289-17569023 FORWARD | Aliases: T6D20.1, T6D20_1 |
2007-07-18 |
| 117962369 |
ZMMBBb-423E3; ZMMBBb0423E03 |
AT3G46520.1 |
75056 |
76488 |
| Symbol: None | actin 12 (ACT12), identical to SP:P53497 Actin 12 {Arabidopsis thaliana} | chr3:17139248-17141195 FORWARD | Aliases: F12A12.40 |
2007-07-18 |
| 117962369 |
ZMMBBb-423E3; ZMMBBb0423E03 |
AT1G49240.1 |
75056 |
76488 |
| Symbol: None | actin 8 (ACT8), identical to SP:Q96293 Actin 8 {Arabidopsis thaliana}; nearly identical to SP:Q96292 Actin 2 (Arabidopsis thaliana) GI:1669387, and to At3g18780 | chr1:18219578-18221966 FORWARD | Aliases: F27J15.1, F27J15_1 |
2007-07-18 |
| 117962369 |
ZMMBBb-423E3; ZMMBBb0423E03 |
AT2G37620.1 |
75056 |
76488 |
| Symbol: None | actin 1 (ACT1), identical to SP:P10671 Actin 1 (Actin 3) {Arabidopsis thaliana} | chr2:15786252-15788548 FORWARD | Aliases: F13M22.12, F13M22_12 |
2007-07-18 |
| 117962369 |
ZMMBBb-423E3; ZMMBBb0423E03 |
AT3G18780.1 |
75056 |
76348 |
| Symbol: None | actin 2 (ACT2), identical to SP:Q96292 Actin 2 {Arabidopsis thaliana}; nearly identical to SP:Q96293 Actin 8 (Arabidopsis thaliana) GI:1669387 and to At1g49240 | chr3:6474877-6477210 FORWARD | Aliases: MVE11.16 |
2007-07-18 |
| 117962369 |
ZMMBBb-423E3; ZMMBBb0423E03 |
AT3G12110.1 |
75056 |
76488 |
| Symbol: None | actin 11 (ACT11), identical to SP:P53496 Actin 11 {Arabidopsis thaliana} | chr3:3857860-3859804 FORWARD | Aliases: T21B14.7 |
2007-07-18 |
| 117962369 |
ZMMBBb-423E3; ZMMBBb0423E03 |
AT5G59370.1 |
75056 |
76488 |
| Symbol: None | actin 4 (ACT4), identical to SP:P53494 Actin 4 {Arabidopsis thaliana} | chr5:23967049-23969048 FORWARD | Aliases: F2O15.3, F2O15_3 |
2007-07-18 |
| 117962369 |
ZMMBBb-423E3; ZMMBBb0423E03 |
AT3G53750.1 |
75056 |
76488 |
| Symbol: None | actin 3 (ACT3), identical to SP:P53493 Actin 3 {Arabidopsis thaliana}; supported by full-length cDNA: Ceres: 19581. | chr3:19926266-19928599 FORWARD | Aliases: F5K20.50 |
2007-07-18 |
| 117962369 |
ZMMBBb-423E3; ZMMBBb0423E03 |
AT5G09810.1 |
75056 |
76468 |
| Symbol: None | actin 7 (ACT7) / actin 2, identical to SP:P53492 Actin 7 (Actin-2) {Arabidopsis thaliana} | chr5:3052167-3054615 FORWARD | Aliases: MYH9.2, MYH9_2 |
2007-07-18 |
| 117962369 |
ZMMBBb-423E3; ZMMBBb0423E03 |
AT2G42170.1 |
75279 |
76591 |
| Symbol: None | actin, putative, similar to actin 2 (Arabidopsis thaliana) gi:9293903:dbj:BAB01806 | chr2:17584792-17587470 FORWARD | Aliases: T24P15.8 |
2007-07-18 |
| 117961512 |
ZMMBBb-435J15; ZMMBBb0435J15 |
AT3G27170.1 |
75900 |
79069 |
| Symbol: None | chloride channel protein (CLC-b), identical to CLC-b chloride channel protein GB:CAA96058 from (Arabidopsis thaliana) (J. Biol. Chem. 271 (52), 33632-33638 (1996)) | chr3:10025254-10028435 FORWARD | Aliases: MYF5.4 |
2007-07-18 |
| 117961512 |
ZMMBBb-435J15; ZMMBBb0435J15 |
AT5G40890.1 |
75900 |
79069 |
| Symbol: None | chloride channel protein (CLC-a), identical to GI:1742952 (gb:AAC05742.1) | chr5:16398574-16402547 REVERSE | Aliases: MHK7.12, MHK7_12 |
2007-07-18 |
| 117959276 |
ZMMBBb-301M16; ZMMBBb0301M16 |
AT5G66070.1 |
10726 |
11907 |
| Symbol: None | zinc finger (C3HC4-type RING finger) family protein, contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger) | chr5:26439149-26440308 FORWARD | Aliases: K2A18.15, K2A18_15 |
2007-07-18 |
| 117959276 |
ZMMBBb-301M16; ZMMBBb0301M16 |
AT3G51370.1 |
16567 |
18586 |
| Symbol: None | protein phosphatase 2C, putative / PP2C, putative, similar to Ser/Thr protein phosphatase 2C (PP2C6) (GI:15020818) (Arabidopsis thaliana); similar to protein phosphatase 2C (GI:3608412) (Mesembryanthemum crystallinum); contains Pfam PF00481 : Protein phosphatase 2C domain | chr3:19080402-19083174 FORWARD | Aliases: F26O13.10 |
2007-07-18 |
| 117959276 |
ZMMBBb-301M16; ZMMBBb0301M16 |
AT5G66080.1 |
16567 |
18586 |
| Symbol: None | protein phosphatase 2C family protein / PP2C family protein, similar to Ser/Thr protein phosphatase 2C (PP2C6) (GI:15020818) (Arabidopsis thaliana); similar to protein phosphatase 2C (GI:3608412) (Mesembryanthemum crystallinum); contains Pfam PF00481 : Protein phosphatase 2C domain | chr5:26440645-26442632 REVERSE | Aliases: K2A18.16, K2A18_16 |
2007-07-18 |
| 117959276 |
ZMMBBb-301M16; ZMMBBb0301M16 |
AT4G35870.1 |
61042 |
63504 |
| Symbol: None | expressed protein | chr4:16990176-16992891 FORWARD | Aliases: F4B14.140, F4B14_140 |
2007-07-18 |
| 117959276 |
ZMMBBb-301M16; ZMMBBb0301M16 |
AT2G37180.1 |
98474 |
99932 |
| Symbol: None | plasma membrane intrinsic protein 2C (PIP2C) / aquaporin PIP2.3 (PIP2.3) / water-stress induced tonoplast intrinsic protein (RD28), identical to plasma membrane intrinsic protein 2C SP:P30302 from (Arabidopsis thaliana) | chr2:15624791-15626234 FORWARD | Aliases: T2N18.6, T2N18_6 |
2007-07-18 |
| 117959276 |
ZMMBBb-301M16; ZMMBBb0301M16 |
AT2G16850.1 |
98474 |
99928 |
| Symbol: PIP2;8 | plasma membrane intrinsic protein, putative, very strong similarity to plasma membrane intrinsic protein (SIMIP) (Arabidopsis thaliana) GI:2306917 | chr2:7308663-7310519 FORWARD | Aliases: F12A24.3, F12A24_3, PIP3B, PIP2;8 |
2007-07-18 |
| 115752444 |
ZMMBBb-148A11; ZMMBBb0148A11 |
AT1G04410.1 |
93191 |
94907 |
| Symbol: None | malate dehydrogenase, cytosolic, putative, strong similarity to malate dehydrogenase from Mesembryanthemum crystallinum (SP:O24047), Medicago sativa (SP:O48905), Prunus persica (GI:15982948); contains InterPro entry IPR001236: Lactate/malate dehydrogenase | chr1:1189077-1191411 REVERSE | Aliases: F19P19.13, F19P19_13 |
2007-07-18 |
| 115752444 |
ZMMBBb-148A11; ZMMBBb0148A11 |
AT5G43330.1 |
93191 |
94907 |
| Symbol: None | malate dehydrogenase, cytosolic, putative, strong similarity to cytosolic malate dehydrogenase (EC 1.1.1.37) SP:O24047 {Mesembryanthemum crystallinum}, SP:O48905 {Medicago sativa}, (Prunus persica) GI:15982948; contains InterPro entry IPR001236: Lactate/malate dehydrogenase | chr5:17407661-17409867 FORWARD | Aliases: MWF20.2, MWF20_2 |
2007-07-18 |
| 114703876 |
ZMMBBb-350B2; ZMMBBb0350B02 |
AT4G10770.1 |
70573 |
73988 |
| Symbol: None | oligopeptide transporter OPT family protein, similar to oligopeptide transporter Opt1p (Candida albicans) GI:2367386; contains Pfam profile PF03169: OPT oligopeptide transporter protein | chr4:6628400-6632595 REVERSE | Aliases: T12H20.7, T12H20_7 |
2007-07-18 |
| 114703876 |
ZMMBBb-350B2; ZMMBBb0350B02 |
AT1G64650.1 |
74456 |
76857 |
| Symbol: None | expressed protein | chr1:24027161-24030058 REVERSE | Aliases: F1N19.22, F1N19_22 |
2007-07-18 |
| 114703876 |
ZMMBBb-350B2; ZMMBBb0350B02 |
AT4G27720.1 |
74456 |
76857 |
| Symbol: None | expressed protein, contains Pfam PF05631: Protein of unknown function (DUF791) | chr4:13831126-13833820 FORWARD | Aliases: T29A15.210, T29A15_210 |
2007-07-18 |
| 114703874 |
ZMMBBb-344E3; ZMMBBb0344E03 |
AT2G42810.1 |
34846 |
42690 |
| Symbol: PAPP5 | Encodes a phytochrome-specific type 5 phosphatase. It dephosphorylates active Pfr-phytochromes. Controls light signal flux by enhancing phytochrome stability and affinity for a signal transducer. It localizes in the cytoplasm in darkness and in the nucleus in light. | chr2:17819012-17823739 REVERSE | Aliases: F7D19.19, F7D19_19, PAPP5 |
2007-07-18 |
| 113195782 |
ZMMBBb-470G13; ZMMBBb0470G13 |
AT1G13950.1 |
78781 |
80527 |
| Symbol: None | eukaryotic translation initiation factor 5A-1 / eIF-5A 1, identical to SP:Q9XI91 Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) {Arabidopsis thaliana} | chr1:4773573-4774838 FORWARD | Aliases: F16A14.17 |
2007-07-18 |
| 113195782 |
ZMMBBb-470G13; ZMMBBb0470G13 |
AT1G69410.1 |
78781 |
80527 |
| Symbol: None | eukaryotic translation initiation factor 5A, putative / eIF-5A, putative, strong similarity to eukaryotic initiation factor 5A (2) (Nicotiana plumbaginifolia) GI:19702, SP:Q9AXQ6: Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) {Lycopersicon esculentum} | chr1:26092868-26094047 FORWARD | Aliases: F10D13.8, F10D13_8 |
2007-07-18 |
| 112984850 |
ZMMBBb-242G24; ZMMBBb0242G24 |
AT2G40370.1 |
83420 |
85624 |
| Symbol: None | laccase, putative / diphenol oxidase, putative, similar to laccase (Populus balsamifera subsp. trichocarpa)(GI:3805960) | chr2:16865248-16867684 REVERSE | Aliases: T3G21.14, T3G21_14 |
2007-07-18 |
| 112984850 |
ZMMBBb-242G24; ZMMBBb0242G24 |
AT5G05390.1 |
83435 |
85624 |
| Symbol: None | laccase, putative / diphenol oxidase, putative, similar to laccase (Populus balsamifera subsp. trichocarpa)(GI:3805960) | chr5:1594754-1597043 FORWARD | Aliases: K18I23.20, K18I23_20 |
2007-07-18 |
| 112984849 |
ZMMBBb-234D2; ZMMBBb0234D02 |
AT2G04842.1 |
29288 |
32098 |
| Symbol: None | threonyl-tRNA synthetase, putative / threonine--tRNA ligase, putative, similar to SP:P18256 Threonyl-tRNA synthetase 2 (EC 6.1.1.3) (Threonine--tRNA ligase) (ThrRS) {Bacillus subtilis}; contains Pfam profiles PF00587: tRNA synthetase class II core domain (G, H, P, S and T), PF03129: Anticodon binding domain | chr2:1698463-1701268 REVERSE | Aliases: None |
2007-07-18 |
| 112984839 |
ZMMBBb-222I11; ZMMBBb0222I11 |
AT4G35230.1 |
84383 |
88572 |
| Symbol: None | protein kinase family protein, contains protein kinase domain, Pfam:PF00069 | chr4:16755123-16758096 REVERSE | Aliases: F23E12.210, F23E12_210 |
2007-07-18 |
| 112984826 |
ZMMBBb-129N24; ZMMBBb0129N24 |
AT3G20362.1 |
147881 |
148104 |
| Symbol: None | hypothetical protein, loosely supported by Brassica genome sequence alignments. | chr3:7103823-7104256 FORWARD | Aliases: None |
2007-07-18 |
| 112422289 |
ZMMBBb-295J19; ZMMBBb0295J19 |
ATCG00600.1 |
70689 |
70802 |
| Symbol: PETG | Cytochrome b6-f complex, subunit V. Disruption of homologous gene in Chlamydomonas results in disruption of cytochrome b6-f complex. | chrC:65998-66111 FORWARD | Aliases: PETG |
2007-07-18 |
| 112422289 |
ZMMBBb-295J19; ZMMBBb0295J19 |
ATCG00590.1 |
70980 |
71075 |
| Symbol: ORF31 | hypothetical protein | chrC:65712-65807 FORWARD | Aliases: ORF31 |
2007-07-18 |
| 112422289 |
ZMMBBb-295J19; ZMMBBb0295J19 |
ATCG00570.1 |
72133 |
72252 |
| Symbol: PSBF | PSII cytochrome b559 | chrC:63942-64061 REVERSE | Aliases: PSBF |
2007-07-18 |
| 112422289 |
ZMMBBb-295J19; ZMMBBb0295J19 |
ATCG00560.1 |
72279 |
72394 |
| Symbol: PSBL | PSII L protein | chrC:63804-63920 REVERSE | Aliases: PSBL |
2007-07-18 |
| 112422289 |
ZMMBBb-295J19; ZMMBBb0295J19 |
ATCG00550.1 |
72534 |
72655 |
| Symbol: PSBJ | PSII component | chrC:63538-63660 REVERSE | Aliases: PSBJ |
2007-07-18 |
| 112422287 |
ZMMBBb-290C23; ZMMBBb0290C23 |
AT5G53180.1 |
65328 |
69799 |
| Symbol: None | polypyrimidine tract-binding protein, putative / heterogeneous nuclear ribonucleoprotein, putative, similar to Polypyrimidine tract-binding protein 1 (PTB) (Heterogeneous nuclear ribonucleoprotein I) (hnRNP I) from {Rattus norvegicus} SP:Q00438, {Homo sapiens} SP:P26599; contains InterPro entry IPR000504: RNA-binding region RNP-1 (RNA recognition motif) (RRM) | chr5:21585426-21589115 REVERSE | Aliases: MFH8.12, MFH8_12 |
2007-07-18 |
| 112422244 |
ZMMBBb-114I1; ZMMBBb0114I01 |
AT3G55990.1 |
60626 |
62787 |
| Symbol: None | expressed protein, contains Pfam profile PF03005: Arabidopsis proteins of unknown function | chr3:20791294-20794212 FORWARD | Aliases: F27K19.170 |
2007-07-18 |
| 111548766 |
ZMMBBb-607I23; ZMMBBb0607I23 |
AT4G28700.1 |
15095 |
16564 |
| Symbol: None | ammonium transporter, putative, similar to SP:O04161 Ammonium transporter 1, member 2 (LeAMT1;2) {Lycopersicon esculentum}; contains Pfam profile PF00909: Ammonium Transporter Family | chr4:14161687-14163201 FORWARD | Aliases: F16A16.190, F16A16_190 |
2007-07-18 |
| 111548766 |
ZMMBBb-607I23; ZMMBBb0607I23 |
AT3G24300.1 |
15095 |
16561 |
| Symbol: None | ammonium transporter 1, member 3 (AMT1.3), nearly identical to SP:Q9SQH9:AT13_ARATH Ammonium transporter 1, member 3 (AtAMT1;3) {Arabidopsis thaliana} | chr3:8805638-8807395 REVERSE | Aliases: K7M2.7 |
2007-07-18 |
| 111548766 |
ZMMBBb-607I23; ZMMBBb0607I23 |
AT3G24290.1 |
15095 |
16579 |
| Symbol: None | ammonium transporter, putative, similar to SP:Q9SQH9:AT13_ARATH Ammonium transporter 1, member 3 (AtAMT1;3) {Arabidopsis thaliana}; contains Pfam profile PF00909: Ammonium Transporter Family | chr3:8801407-8802897 REVERSE | Aliases: K7M2.6 |
2007-07-18 |
| 111548766 |
ZMMBBb-607I23; ZMMBBb0607I23 |
AT4G13510.1 |
15104 |
16552 |
| Symbol: None | ammonium transporter 1, member 1 (AMT1.1), identical to SP:P54144 High affinity ammonium transporter (AtAMT1;1) {Arabidopsis thaliana} | chr4:7858179-7859914 FORWARD | Aliases: T6G15.60, T6G15_60 |
2007-07-18 |
| 111548766 |
ZMMBBb-607I23; ZMMBBb0607I23 |
AT4G28710.1 |
38160 |
45935 |
| Symbol: None | myosin heavy chain, putative, similar to myosin (Arabidopsis thaliana) gi:499047:emb:CAA84066. | chr4:14172004-14178054 FORWARD | Aliases: F16A16.180, F16A16_180 |
2007-07-18 |
| 111186102 |
ZMMBBb-128I17; ZMMBBb0128I17 |
AT3G57870.1 |
23387 |
26286 |
| Symbol: EMB1637 | ubiquitin-conjugating enzyme, putative, strong similarity to SP:P50550 Ubiquitin-like protein SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein ligase) (Ubiquitin carrier protein) (Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis}; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme | chr3:21439624-21441155 REVERSE | Aliases: T10K17.80, EMB1637, EMBRYO DEFECTIVE 1637 |
2007-07-18 |
| 111186082 |
ZMMBBb-295J15; ZMMBBb0295J15 |
AT3G02710.1 |
90548 |
96323 |
| Symbol: None | nuclear associated protein-related / NAP-related, similar to Nuclear associated protein (NAP) (NYD-SP19) (Swiss-Prot:Q8WYA6) (Homo sapiens) | chr3:583120-585955 FORWARD | Aliases: F16B3.34, F16B3_34 |
2007-07-18 |
| 111186077 |
ZMMBBb-545P15; ZMMBBb0545P15 |
AT5G44100.1 |
95045 |
99239 |
| Symbol: CKL7 | casein kinase, putative, similar to dual specificity kinase 1 gi:1216484:gb:AAB47968 | chr5:17766345-17769920 REVERSE | Aliases: MLN1.2, MLN1_2, CKL7 |
2007-07-18 |
| 111186077 |
ZMMBBb-545P15; ZMMBBb0545P15 |
AT3G23340.1 |
95296 |
99239 |
| Symbol: CKL10 | casein kinase, putative, similar to casein kinase I (Arabidopsis thaliana) gi:1197461:emb:CAA55396 | chr3:8350810-8353966 FORWARD | Aliases: MLM24.21, CKL10 |
2007-07-18 |
| 110797545 |
ZMMBBb-295B17; ZMMBBb0295B17 |
AT2G44090.1 |
17778 |
21808 |
| Symbol: None | expressed protein | chr2:18245436-18248369 REVERSE | Aliases: F6E13.22 |
2007-07-18 |
| 110797545 |
ZMMBBb-295B17; ZMMBBb0295B17 |
AT3G59910.1 |
17799 |
21825 |
| Symbol: None | expressed protein | chr3:22141460-22144533 REVERSE | Aliases: F24G16.180 |
2007-07-18 |
| 110797483 |
ZMMBBb-323D7; ZMMBBb0323D07 |
AT3G11320.1 |
33186 |
35813 |
| Symbol: None | similar to phosphate translocator-related [Arabidopsis thaliana] (TAIR:At5g05820.1); similar to Putative phosphate/phosphoenolpyruvate translocator protein [Oryza sativa (japonica cultivar-group)] (GB:XP_470662.1) | chr3:3546652-3548862 REVERSE | Aliases: F11B9.28 |
2007-07-18 |
| 110797483 |
ZMMBBb-323D7; ZMMBBb0323D07 |
AT5G05820.1 |
33189 |
35813 |
| Symbol: None | phosphate translocator-related, low similarity to phosphoenolpyruvate/phosphate translocator precursor (Mesembryanthemum crystallinum) GI:9295275, glucose-6-phosphate/phosphate-translocator precursor (Zea mays) GI:2997589; contains Pfam profile PF00892: Integral membrane protein | chr5:1751689-1754179 REVERSE | Aliases: MJJ3.24, MJJ3_24 |
2007-07-18 |
| 110797468 |
ZMMBBb-323F8; ZMMBBb0323F08 |
AT2G39010.1 |
36241 |
38431 |
| Symbol: PIP2;6 | aquaporin, putative, similar to plasma membrane aquaporin 2b GI:7209560 from (Raphanus sativus) | chr2:16298555-16301112 FORWARD | Aliases: T7F6.18, T7F6_18, PIP2E, PIP2;6 |
2007-07-18 |
| 110797468 |
ZMMBBb-323F8; ZMMBBb0323F08 |
AT5G60660.1 |
36343 |
38431 |
| Symbol: PIP2;4 | major intrinsic family protein / MIP family protein, similar to mipC protein GI:1657948 from (Mesembryanthemum crystallinum) | chr5:24392686-24394215 REVERSE | Aliases: MUP24.9, MUP24_9, PIP2F, PIP2;4 |
2007-07-18 |
| 110797468 |
ZMMBBb-323F8; ZMMBBb0323F08 |
AT3G54820.1 |
36366 |
38424 |
| Symbol: PIP2;5 | aquaporin, putative, similar to plasma membrane aquaporin GI:3551133 from (Raphanus sativus) | chr3:20312999-20314988 FORWARD | Aliases: F28P10.200, PIP2D, PIP2;5 |
2007-07-18 |
| 110797468 |
ZMMBBb-323F8; ZMMBBb0323F08 |
AT2G37180.1 |
36366 |
38431 |
| Symbol: None | plasma membrane intrinsic protein 2C (PIP2C) / aquaporin PIP2.3 (PIP2.3) / water-stress induced tonoplast intrinsic protein (RD28), identical to plasma membrane intrinsic protein 2C SP:P30302 from (Arabidopsis thaliana) | chr2:15624791-15626234 FORWARD | Aliases: T2N18.6, T2N18_6 |
2007-07-18 |
| 110797468 |
ZMMBBb-323F8; ZMMBBb0323F08 |
AT2G37170.1 |
36366 |
38431 |
| Symbol: None | plasma membrane intrinsic protein 2B (PIP2B) / aquaporin PIP2.2 (PIP2.2), identical to SP:P43287 Plasma membrane intrinsic protein 2B {Arabidopsis thaliana} | chr2:15620481-15621933 REVERSE | Aliases: T2N18.7, T2N18_7 |
2007-07-18 |
| 110797468 |
ZMMBBb-323F8; ZMMBBb0323F08 |
AT2G16850.1 |
36366 |
38419 |
| Symbol: PIP2;8 | plasma membrane intrinsic protein, putative, very strong similarity to plasma membrane intrinsic protein (SIMIP) (Arabidopsis thaliana) GI:2306917 | chr2:7308663-7310519 FORWARD | Aliases: F12A24.3, F12A24_3, PIP3B, PIP2;8 |
2007-07-18 |
| 110797468 |
ZMMBBb-323F8; ZMMBBb0323F08 |
AT4G35100.1 |
36366 |
38419 |
| Symbol: None | plasma membrane intrinsic protein (SIMIP), nearly identical to plasma membrane intrinsic protein (Arabidopsis thaliana) GI:2306917 | chr4:16708628-16710253 FORWARD | Aliases: T12J5.9 |
2007-07-18 |
| 110797468 |
ZMMBBb-323F8; ZMMBBb0323F08 |
AT3G53420.1 |
36366 |
38431 |
| Symbol: None | plasma membrane intrinsic protein 2A (PIP2A) / aquaporin PIP2.1 (PIP2.1), identical to plasma membrane intrinsic protein 2A SP: P43286 from (Arabidopsis thaliana) | chr3:19814660-19816691 REVERSE | Aliases: F4P12.120 |
2007-07-18 |
| 110665852 |
ZMMBBb-240E9; ZMMBBb0240E09 |
AT3G06680.1 |
39079 |
39533 |
| Symbol: None | 60S ribosomal protein L29 (RPL29B), similar to 60S ribosomal protein L29 GB:P25886 from (Rattus norvegicus) | chr3:2114408-2114885 REVERSE | Aliases: T8E24.9 |
2007-07-18 |
| 110665852 |
ZMMBBb-240E9; ZMMBBb0240E09 |
AT3G06700.1 |
39259 |
39533 |
| Symbol: None | 60S ribosomal protein L29 (RPL29A), similar to ribosomal protein L29 GI:7959366 (Panax ginseng) | chr3:2117360-2117984 REVERSE | Aliases: T8E24.8 |
2007-07-18 |
| 110665852 |
ZMMBBb-240E9; ZMMBBb0240E09 |
AT3G62560.1 |
78420 |
79949 |
| Symbol: None | GTP-binding protein, putative, similar to GTP-binding protein SAR1A (SP:O04834) (Arabidopsis thaliana); small GTP-binding protein Bsar1a - Brassica campestris, EMBL:U55035 | chr3:23148459-23150021 FORWARD | Aliases: T12C14.260 |
2007-07-18 |
| 110665852 |
ZMMBBb-240E9; ZMMBBb0240E09 |
AT1G09180.1 |
78420 |
79949 |
| Symbol: ATSAR1 | GTP-binding protein, putative, strong similarity to SP:Q01474 GTP-binding protein SAR1B and SP:O04834 GTP-binding protein SAR1A (Arabidopsis thaliana) | chr1:2965025-2965974 FORWARD | Aliases: T12M4.12, T12M4_12, ATSARA1A, ATSAR1 |
2007-07-18 |
| 110665852 |
ZMMBBb-240E9; ZMMBBb0240E09 |
AT1G56330.1 |
78420 |
79949 |
| Symbol: ATSARA1B | GTP-binding protein (SAR1B), identical to GTP-binding protein (SAR1B) (Arabidopsis thaliana) SP:Q01474 | chr1:21090220-21092214 REVERSE | Aliases: F14G9.6, F14G9_6, ATSARA1B |
2007-07-18 |
| 110665852 |
ZMMBBb-240E9; ZMMBBb0240E09 |
AT4G02080.1 |
78420 |
79949 |
| Symbol: ATSAR2 | GTP-binding protein (SAR1A), identical to SP:O04834 GTP-binding protein SAR1A. (Arabidopsis thaliana) | chr4:921462-922776 FORWARD | Aliases: T10M13.9, T10M13_9, ATSARA1C, ATSAR2 |
2007-07-18 |
| 110625271 |
ZMMBBb-129B17; ZMMBBb0129B17 |
AT1G45050.1 |
74450 |
76410 |
| Symbol: None | ubiquitin-conjugating enzyme 15 (UBC15), E2; identical to ubiquitin-conjugating enzyme 15 GI:2801442 from (Arabidopsis thaliana) | chr1:17033721-17035638 FORWARD | Aliases: F27F5.13, F27F5_13 |
2007-07-18 |
| 110625271 |
ZMMBBb-129B17; ZMMBBb0129B17 |
AT5G42990.1 |
74450 |
76410 |
| Symbol: None | ubiquitin-conjugating enzyme 18 (UBC18), E2; identical to gi:2801448 | chr5:17261219-17263182 REVERSE | Aliases: MBD2.19, MBD2_19 |
2007-07-18 |
| 109690001 |
ZMMBBb-317J24; ZMMBBb0317J24 |
AT2G18450.1 |
60799 |
65925 |
| Symbol: None | succinate dehydrogenase (ubiquinone) flavoprotein subunit, mitochondrial, putative / flavoprotein subunit of complex II, putative, strong similarity to SP:O82663 Succinate dehydrogenase (ubiquinone) flavoprotein subunit, mitochondrial (EC 1.3.5.1) (FP) (Flavoprotein subunit of complex II) {Arabidopsis thaliana} | chr2:8004474-8007886 REVERSE | Aliases: T30D6.4, T30D6_4 |
2007-07-18 |
| 109690001 |
ZMMBBb-317J24; ZMMBBb0317J24 |
AT5G66760.1 |
60799 |
66550 |
| Symbol: None | succinate dehydrogenase (ubiquinone) flavoprotein subunit, mitochondrial / flavoprotein subunit of complex II, identical to SP:O82663 Succinate dehydrogenase (ubiquinone) flavoprotein subunit, mitochondrial (EC 1.3.5.1) (FP) (Flavoprotein subunit of complex II) {Arabidopsis thaliana} | chr5:26670884-26674762 FORWARD | Aliases: MSN2.16, MSN2_16 |
2007-07-18 |
| 85687395 |
|
ATCG00020.1 |
432 |
1493 |
| Symbol: PSBA | Encodes chlorophyll binding protein D1, a part of the photosystem II reaction center core | chrC:383-1444 REVERSE | Aliases: PSBA |
2007-07-18 |
| 85687395 |
|
ATCG00070.1 |
7383 |
7568 |
| Symbol: PSBK | PSII K protein | chrC:7017-7202 FORWARD | Aliases: PSBK |
2007-07-18 |
| 85687395 |
|
ATCG00080.1 |
7986 |
8096 |
| Symbol: PSBI | PSII I protein | chrC:7583-7693 FORWARD | Aliases: PSBI |
2007-07-18 |
| 85687395 |
|
ATCG00120.1 |
10330 |
11853 |
| Symbol: ATPA | ATPase alpha subunit | chrC:9938-11461 REVERSE | Aliases: ATPA |
2007-07-18 |
| 85687395 |
|
ATCG00130.1 |
11932 |
13290 |
| Symbol: ATPF | ATPase F subunit. | chrC:11529-12798 REVERSE | Aliases: ATPF |
2007-07-18 |
| 85687395 |
|
ATCG00140.1 |
13883 |
14128 |
| Symbol: ATPH | ATPase III subunit | chrC:13262-13507 REVERSE | Aliases: ATPH |
2007-07-18 |
| 85687395 |
|
ATCG00150.1 |
15395 |
16144 |
| Symbol: ATPI | ATPase a subunit | chrC:14021-14770 REVERSE | Aliases: ATPI |
2007-07-18 |
| 85687395 |
|
ATCG00160.1 |
16374 |
17084 |
| Symbol: RPS2 | Chloroplast ribosomal protein S2 | chrC:15013-15723 REVERSE | Aliases: RPS2 |
2007-07-18 |
| 85687395 |
|
ATCG00190.1 |
24480 |
27692 |
| Symbol: RPOB | Chloroplast DNA-dependent RNA polymerase B subunit. | chrC:23111-26329 REVERSE | Aliases: RPOB |
2007-07-18 |
| 85687395 |
|
ATCG00210.1 |
29558 |
29647 |
| Symbol: YCF6 | hypothetical protein | chrC:28089-28178 FORWARD | Aliases: YCF6 |
2007-07-18 |
| 85687395 |
|
ATCG00220.1 |
30826 |
30930 |
| Symbol: PSBM | PSII low MW protein | chrC:28707-28811 REVERSE | Aliases: PSBM |
2007-07-18 |
| 85687395 |
|
ATCG00270.1 |
34597 |
35658 |
| Symbol: PSBD | PSII D2 protein | chrC:32711-33772 FORWARD | Aliases: PSBD |
2007-07-18 |
| 85687395 |
|
ATCG00280.1 |
35606 |
37027 |
| Symbol: PSBC | chloroplast gene encoding a CP43 subunit of the photosystem II reaction center. promoter contains a blue-light responsive element. | chrC:33720-35141 FORWARD | Aliases: PSBC |
2007-07-18 |
| 85687395 |
|
ATCG00300.1 |
37734 |
37922 |
| Symbol: YCF9 | encodes PsbZ, which is a subunit of photosystem II. In Chlamydomonas, this protein has been shown to be essential in the interaction between PS II and the light harvesting complex II. | chrC:35751-35939 FORWARD | Aliases: YCF9 |
2007-07-18 |
| 85687395 |
|
ATCG00330.1 |
39101 |
39403 |
| Symbol: RPS14 | 30S chloroplast ribosomal protein S14 | chrC:36938-37240 REVERSE | Aliases: RPS14 |
2007-07-18 |
| 85687395 |
|
ATCG00340.1 |
39532 |
41736 |
| Symbol: PSAB | Encodes the D1 subunit of photosystem I and II reaction centers. | chrC:37375-39579 REVERSE | Aliases: PSAB |
2007-07-18 |